RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 YY1P25490 414 aa16.04■□□□□ 0.16
SOX2-OT-201ENST00000460739 AK7Q96M32 723 aa16.04■□□□□ 0.16
SOX2-OT-201ENST00000460739 CHD4Q14839 1912 aa16.04■□□□□ 0.16
SOX2-OT-201ENST00000460739 CC2D1BQ5T0F9 858 aaKnown RBP16.03■□□□□ 0.16
SOX2-OT-201ENST00000460739 LINC00116Q8NCU8 138 aa16.03■□□□□ 0.16
SOX2-OT-201ENST00000460739 ATP6V1AP38606 617 aa16.02■□□□□ 0.16
SOX2-OT-201ENST00000460739 ITPK1Q13572 414 aa16.02■□□□□ 0.16
SOX2-OT-201ENST00000460739 C1orf141Q5JVX7 400 aa16.02■□□□□ 0.16
SOX2-OT-201ENST00000460739 AMIGO3Q86WK7 504 aa16.02■□□□□ 0.16
SOX2-OT-201ENST00000460739 UTRNP46939 3433 aa16.01■□□□□ 0.15
SOX2-OT-201ENST00000460739 SSFA2P28290 1259 aa16.01■□□□□ 0.15
SOX2-OT-201ENST00000460739 COL3A1P02461 1466 aaPredicted RBP16■□□□□ 0.15
SOX2-OT-201ENST00000460739 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16■□□□□ 0.15
SOX2-OT-201ENST00000460739 CABP4P57796 275 aa16■□□□□ 0.15
SOX2-OT-201ENST00000460739 MSL1Q68DK7 614 aa16■□□□□ 0.15
SOX2-OT-201ENST00000460739 CICQ96RK0 1608 aaPredicted RBP16■□□□□ 0.15
SOX2-OT-201ENST00000460739 ADAMTS7Q9UKP4 1686 aa15.99■□□□□ 0.15
SOX2-OT-201ENST00000460739 DIAPH1O60610 1272 aaKnown RBP15.99■□□□□ 0.15
SOX2-OT-201ENST00000460739 KLHL34Q8N239 644 aa15.99■□□□□ 0.15
SOX2-OT-201ENST00000460739 SLC4A9Q96Q91 983 aa15.99■□□□□ 0.15
SOX2-OT-201ENST00000460739 PHF14O94880 888 aa15.98■□□□□ 0.15
SOX2-OT-201ENST00000460739 TJP1Q07157 1748 aa15.97■□□□□ 0.15
SOX2-OT-201ENST00000460739 GNPATO15228 680 aa15.97■□□□□ 0.15
SOX2-OT-201ENST00000460739 HMOX1P09601 288 aa15.97■□□□□ 0.15
SOX2-OT-201ENST00000460739 AKAP4Q5JQC9 854 aa15.97■□□□□ 0.15
SOX2-OT-201ENST00000460739 SMIM5Q71RC9 77 aa15.97■□□□□ 0.15
SOX2-OT-201ENST00000460739 NFATC2IPQ8NCF5 419 aa15.97■□□□□ 0.15
SOX2-OT-201ENST00000460739 NLGN2Q8NFZ4 835 aa15.97■□□□□ 0.15
SOX2-OT-201ENST00000460739 RBM42Q9BTD8 480 aaKnown RBP15.97■□□□□ 0.15
SOX2-OT-201ENST00000460739 MRC1P22897 1456 aa15.97■□□□□ 0.15
SOX2-OT-201ENST00000460739 MYH14Q7Z406 1995 aaKnown RBP15.96■□□□□ 0.15
SOX2-OT-201ENST00000460739 C4AP0C0L4 1744 aa15.95■□□□□ 0.14
SOX2-OT-201ENST00000460739 GPR162Q16538 588 aa15.95■□□□□ 0.14
SOX2-OT-201ENST00000460739 RC3H1Q5TC82 1133 aaKnown RBP15.95■□□□□ 0.14
SOX2-OT-201ENST00000460739 CD2APQ9Y5K6 639 aa15.95■□□□□ 0.14
SOX2-OT-201ENST00000460739 GOLGB1Q14789 3259 aaKnown RBP15.95■□□□□ 0.14
SOX2-OT-201ENST00000460739 CNTNAP4Q9C0A0 1308 aa15.94■□□□□ 0.14
SOX2-OT-201ENST00000460739 CNGB1Q14028 1251 aaPredicted RBP15.94■□□□□ 0.14
SOX2-OT-201ENST00000460739 MTHFSDQ2M296 383 aaKnown RBP15.93■□□□□ 0.14
SOX2-OT-201ENST00000460739 SLC52A2Q9HAB3 445 aa15.93■□□□□ 0.14
SOX2-OT-201ENST00000460739 LGR6Q9HBX8 967 aa15.93■□□□□ 0.14
SOX2-OT-201ENST00000460739 RTCBQ9Y3I0 505 aaKnown RBP15.93■□□□□ 0.14
SOX2-OT-201ENST00000460739 PTCD1O75127 700 aaKnown RBP15.92■□□□□ 0.14
SOX2-OT-201ENST00000460739 TRAPPC3LQ5T215 181 aa15.92■□□□□ 0.14
SOX2-OT-201ENST00000460739 UBR2Q8IWV8 1755 aa15.92■□□□□ 0.14
SOX2-OT-201ENST00000460739 KIF13BQ9NQT8 1826 aa15.91■□□□□ 0.14
SOX2-OT-201ENST00000460739 RNMTO43148 476 aaKnown RBP15.91■□□□□ 0.14
SOX2-OT-201ENST00000460739 RPS6KA4O75676 772 aa15.91■□□□□ 0.14
SOX2-OT-201ENST00000460739 ADRA2BP18089 450 aa15.91■□□□□ 0.14
SOX2-OT-201ENST00000460739 SIPA1L3O60292 1781 aaPredicted RBP15.9■□□□□ 0.14
SOX2-OT-201ENST00000460739 U2SURPO15042 1029 aaKnown RBP15.9■□□□□ 0.14
SOX2-OT-201ENST00000460739 PELP1Q8IZL8 1130 aaKnown RBP15.9■□□□□ 0.14
SOX2-OT-201ENST00000460739 KCPQ6ZWJ8 1503 aa15.89■□□□□ 0.13
SOX2-OT-201ENST00000460739 YBX3P16989 372 aaKnown RBP eCLIP15.89■□□□□ 0.13
SOX2-OT-201ENST00000460739 ARHGEF1Q92888 912 aaKnown RBP15.89■□□□□ 0.13
SOX2-OT-201ENST00000460739 GRIN3BO60391 1043 aa15.88■□□□□ 0.13
SOX2-OT-201ENST00000460739 CRKLP46109 303 aaKnown RBP15.88■□□□□ 0.13
SOX2-OT-201ENST00000460739 NLGN1Q8N2Q7 840 aa15.88■□□□□ 0.13
SOX2-OT-201ENST00000460739 CFAP53Q96M91 514 aa15.88■□□□□ 0.13
SOX2-OT-201ENST00000460739 KIAA1551Q9HCM1 1747 aa15.88■□□□□ 0.13
SOX2-OT-201ENST00000460739 MMP10P09238 476 aa15.87■□□□□ 0.13
SOX2-OT-201ENST00000460739 PPP2R1AP30153 589 aa15.87■□□□□ 0.13
SOX2-OT-201ENST00000460739 ZNF784Q8NCA9 323 aaPredicted RBP15.87■□□□□ 0.13
SOX2-OT-201ENST00000460739 GYS1P13807 737 aa15.86■□□□□ 0.13
SOX2-OT-201ENST00000460739 RFC4P35249 363 aa15.86■□□□□ 0.13
SOX2-OT-201ENST00000460739 GAS2L2Q8NHY3 880 aa15.86■□□□□ 0.13
SOX2-OT-201ENST00000460739 GNAT3A8MTJ3 354 aa15.85■□□□□ 0.13
SOX2-OT-201ENST00000460739 SLC39A6Q13433 755 aa15.85■□□□□ 0.13
SOX2-OT-201ENST00000460739 INTS5Q6P9B9 1019 aaKnown RBP15.85■□□□□ 0.13
SOX2-OT-201ENST00000460739 DNAJC10Q8IXB1 793 aa15.85■□□□□ 0.13
SOX2-OT-201ENST00000460739 N4BP2Q86UW6 1770 aaPredicted RBP15.85■□□□□ 0.13
SOX2-OT-201ENST00000460739 RSPH6AQ9H0K4 717 aa15.84■□□□□ 0.13
SOX2-OT-201ENST00000460739 CYP19A1P11511 503 aaPredicted RBP15.83■□□□□ 0.12
SOX2-OT-201ENST00000460739 VSIG10Q8N0Z9 540 aa15.83■□□□□ 0.12
SOX2-OT-201ENST00000460739 IL17REQ8NFR9 667 aa15.83■□□□□ 0.12
SOX2-OT-201ENST00000460739 PHACTR3Q96KR7 559 aa15.83■□□□□ 0.12
SOX2-OT-201ENST00000460739 CCDC87Q9NVE4 849 aa15.83■□□□□ 0.12
SOX2-OT-201ENST00000460739 NUDCQ9Y266 331 aa15.83■□□□□ 0.12
SOX2-OT-201ENST00000460739 USP42Q9H9J4 1324 aaKnown RBP15.83■□□□□ 0.12
SOX2-OT-201ENST00000460739 C10orf71Q711Q0 1435 aa15.83■□□□□ 0.12
SOX2-OT-201ENST00000460739 PRKAR2BP31323 418 aa15.82■□□□□ 0.12
SOX2-OT-201ENST00000460739 TEFQ10587 303 aa15.82■□□□□ 0.12
SOX2-OT-201ENST00000460739 CEMIPQ8WUJ3 1361 aa15.82■□□□□ 0.12
SOX2-OT-201ENST00000460739 BRCA1P38398 1863 aaKnown RBP15.82■□□□□ 0.12
SOX2-OT-201ENST00000460739 PXDNLA1KZ92 1463 aa15.81■□□□□ 0.12
SOX2-OT-201ENST00000460739 SOS1Q07889 1333 aaPredicted RBP15.81■□□□□ 0.12
SOX2-OT-201ENST00000460739 SRP68Q9UHB9 627 aaKnown RBP15.81■□□□□ 0.12
SOX2-OT-201ENST00000460739 FCHSD2O94868 740 aa15.8■□□□□ 0.12
SOX2-OT-201ENST00000460739 U2AF1L5P0DN76 240 aaPredicted RBP15.8■□□□□ 0.12
SOX2-OT-201ENST00000460739 TGFB2P61812 414 aa15.8■□□□□ 0.12
SOX2-OT-201ENST00000460739 U2AF1Q01081 240 aaKnown RBP eCLIP15.8■□□□□ 0.12
SOX2-OT-201ENST00000460739 TTC5Q8N0Z6 440 aa15.8■□□□□ 0.12
SOX2-OT-201ENST00000460739 PARP3Q9Y6F1 533 aa15.8■□□□□ 0.12
SOX2-OT-201ENST00000460739 FKBP8Q14318 412 aa15.79■□□□□ 0.12
SOX2-OT-201ENST00000460739 ZNF790Q6PG37 636 aa15.79■□□□□ 0.12
SOX2-OT-201ENST00000460739 COL15A1P39059 1388 aa15.78■□□□□ 0.12
SOX2-OT-201ENST00000460739 ZNF496Q96IT1 587 aaPredicted RBP15.78■□□□□ 0.12
SOX2-OT-201ENST00000460739 ZBTB1Q9Y2K1 713 aa15.78■□□□□ 0.12
SOX2-OT-201ENST00000460739 AFDNP55196 1824 aaKnown RBP15.78■□□□□ 0.12
SOX2-OT-201ENST00000460739 HEG1Q9ULI3 1381 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms