RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 TBC1D2BQ9UPU7 963 aa12.4□□□□□ -0.42
EPB41-208ENST00000460378 ABT1Q9ULW3 272 aaKnown RBP12.4□□□□□ -0.42
EPB41-208ENST00000460378 GCC2Q8IWJ2 1684 aa12.4□□□□□ -0.42
EPB41-208ENST00000460378 H7C1D1 291 aa12.4□□□□□ -0.43
EPB41-208ENST00000460378 RNF181Q9P0P0 153 aa12.4□□□□□ -0.43
EPB41-208ENST00000460378 MMP10P09238 476 aa12.39□□□□□ -0.43
EPB41-208ENST00000460378 GPATCH3Q96I76 525 aa12.39□□□□□ -0.43
EPB41-208ENST00000460378 ATP7BP35670 1465 aa12.39□□□□□ -0.43
EPB41-208ENST00000460378 ARHGEF6Q15052 776 aa12.39□□□□□ -0.43
EPB41-208ENST00000460378 PPRC1Q5VV67 1664 aaKnown RBP12.39□□□□□ -0.43
EPB41-208ENST00000460378 ZC3H12CQ9C0D7 883 aaKnown RBP12.39□□□□□ -0.43
EPB41-208ENST00000460378 PRAG1Q86YV5 1406 aa12.39□□□□□ -0.43
EPB41-208ENST00000460378 ARHGAP23Q9P227 1491 aa12.39□□□□□ -0.43
EPB41-208ENST00000460378 CCDC57Q2TAC2 916 aa12.38□□□□□ -0.43
EPB41-208ENST00000460378 ZBTB3Q9H5J0 574 aa12.38□□□□□ -0.43
EPB41-208ENST00000460378 HMMRO75330 724 aa12.38□□□□□ -0.43
EPB41-208ENST00000460378 PARD3Q8TEW0 1356 aa12.38□□□□□ -0.43
EPB41-208ENST00000460378 EYA1Q99502 592 aa12.38□□□□□ -0.43
EPB41-208ENST00000460378 RBM26Q5T8P6 1007 aaKnown RBP12.37□□□□□ -0.43
EPB41-208ENST00000460378 UTP14AQ9BVJ6 771 aaKnown RBP12.37□□□□□ -0.43
EPB41-208ENST00000460378 ALKQ9UM73 1620 aa12.37□□□□□ -0.43
EPB41-208ENST00000460378 SLC39A6Q13433 755 aa12.37□□□□□ -0.43
EPB41-208ENST00000460378 TCIRG1Q13488 830 aa12.37□□□□□ -0.43
EPB41-208ENST00000460378 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.37□□□□□ -0.43
EPB41-208ENST00000460378 ERBB3P21860 1342 aa12.37□□□□□ -0.43
EPB41-208ENST00000460378 ADRA2BP18089 450 aa12.37□□□□□ -0.43
EPB41-208ENST00000460378 RAD21O60216 631 aa12.36□□□□□ -0.43
EPB41-208ENST00000460378 ZSCAN29Q8IWY8 852 aaPredicted RBP12.36□□□□□ -0.43
EPB41-208ENST00000460378 TTLL6Q8N841 843 aa12.36□□□□□ -0.43
EPB41-208ENST00000460378 PRR36Q9H6K5 1346 aa12.36□□□□□ -0.43
EPB41-208ENST00000460378 EIF4A2Q14240 407 aaKnown RBP12.36□□□□□ -0.43
EPB41-208ENST00000460378 IQCA1LA6NCM1 817 aa12.36□□□□□ -0.43
EPB41-208ENST00000460378 SSH2Q76I76 1423 aa12.36□□□□□ -0.43
EPB41-208ENST00000460378 LRRFIP1Q32MZ4 808 aaKnown RBP12.36□□□□□ -0.43
EPB41-208ENST00000460378 PALLDQ8WX93 1383 aa12.36□□□□□ -0.43
EPB41-208ENST00000460378 USP6P35125 1406 aa12.36□□□□□ -0.43
EPB41-208ENST00000460378 FBLN1P23142 703 aa12.34□□□□□ -0.43
EPB41-208ENST00000460378 SSFA2P28290 1259 aa12.34□□□□□ -0.43
EPB41-208ENST00000460378 ASXL1Q8IXJ9 1541 aa12.34□□□□□ -0.43
EPB41-208ENST00000460378 MYOM2P54296 1465 aa12.34□□□□□ -0.43
EPB41-208ENST00000460378 A0A1W2PP64 1363 aa12.34□□□□□ -0.43
EPB41-208ENST00000460378 NFE2L2Q16236 605 aa12.34□□□□□ -0.43
EPB41-208ENST00000460378 CCDC152Q4G0S7 254 aa12.34□□□□□ -0.43
EPB41-208ENST00000460378 G3BP1Q13283 466 aaKnown RBP eCLIP12.34□□□□□ -0.43
EPB41-208ENST00000460378 CCDC27Q2M243 656 aa12.34□□□□□ -0.43
EPB41-208ENST00000460378 PARP10Q53GL7 1025 aa12.34□□□□□ -0.43
EPB41-208ENST00000460378 ERFEQ4G0M1 354 aa12.33□□□□□ -0.44
EPB41-208ENST00000460378 HYPKQ9NX55 129 aa12.33□□□□□ -0.44
EPB41-208ENST00000460378 KIF7Q2M1P5 1343 aa12.33□□□□□ -0.44
EPB41-208ENST00000460378 RNMTO43148 476 aaKnown RBP12.33□□□□□ -0.44
EPB41-208ENST00000460378 CAVIN4Q5BKX8 364 aa12.33□□□□□ -0.44
EPB41-208ENST00000460378 MCM10Q7L590 875 aa12.33□□□□□ -0.44
EPB41-208ENST00000460378 BIN2Q9UBW5 565 aaPredicted RBP12.33□□□□□ -0.44
EPB41-208ENST00000460378 PPP2R1AP30153 589 aa12.32□□□□□ -0.44
EPB41-208ENST00000460378 DNAJC10Q8IXB1 793 aa12.32□□□□□ -0.44
EPB41-208ENST00000460378 CDC42BPGQ6DT37 1551 aa12.32□□□□□ -0.44
EPB41-208ENST00000460378 PPIP5K2O43314 1243 aa12.32□□□□□ -0.44
EPB41-208ENST00000460378 CCDC93Q567U6 631 aa12.32□□□□□ -0.44
EPB41-208ENST00000460378 CC2D2BQ6DHV5 1058 aa12.32□□□□□ -0.44
EPB41-208ENST00000460378 DPP8Q6V1X1 898 aaPredicted RBP12.32□□□□□ -0.44
EPB41-208ENST00000460378 RTL1A6NKG5 1358 aa12.32□□□□□ -0.44
EPB41-208ENST00000460378 KCNQ4P56696 695 aa12.32□□□□□ -0.44
EPB41-208ENST00000460378 PLSCR1O15162 318 aa12.31□□□□□ -0.44
EPB41-208ENST00000460378 SERPINB2P05120 415 aa12.31□□□□□ -0.44
EPB41-208ENST00000460378 IQGAP3Q86VI3 1631 aa12.31□□□□□ -0.44
EPB41-208ENST00000460378 APAF1O14727 1248 aa12.31□□□□□ -0.44
EPB41-208ENST00000460378 HTATSF1O43719 755 aaKnown RBP12.31□□□□□ -0.44
EPB41-208ENST00000460378 PHKG2P15735 406 aa12.31□□□□□ -0.44
EPB41-208ENST00000460378 SAMD1Q6SPF0 538 aaPredicted RBP12.31□□□□□ -0.44
EPB41-208ENST00000460378 DCPSQ96C86 337 aaKnown RBP12.31□□□□□ -0.44
EPB41-208ENST00000460378 NSFL1CQ9UNZ2 370 aaKnown RBP12.31□□□□□ -0.44
EPB41-208ENST00000460378 TNIP1Q15025 636 aa12.31□□□□□ -0.44
EPB41-208ENST00000460378 ANKRD18AQ8IVF6 992 aa12.31□□□□□ -0.44
EPB41-208ENST00000460378 SLF2Q8IX21 1173 aa12.31□□□□□ -0.44
EPB41-208ENST00000460378 TAOK3Q9H2K8 898 aa12.31□□□□□ -0.44
EPB41-208ENST00000460378 API5Q9BZZ5 524 aaKnown RBP12.3□□□□□ -0.44
EPB41-208ENST00000460378 TAOK2Q9UL54 1235 aa12.3□□□□□ -0.44
EPB41-208ENST00000460378 RPS6KA4O75676 772 aa12.3□□□□□ -0.44
EPB41-208ENST00000460378 USPL1Q5W0Q7 1092 aa12.3□□□□□ -0.44
EPB41-208ENST00000460378 POLKQ9UBT6 870 aa12.3□□□□□ -0.44
EPB41-208ENST00000460378 DBF4Q9UBU7 674 aaPredicted RBP12.3□□□□□ -0.44
EPB41-208ENST00000460378 PTPRUQ92729 1446 aa12.3□□□□□ -0.44
EPB41-208ENST00000460378 PHLPP1O60346 1717 aa12.3□□□□□ -0.44
EPB41-208ENST00000460378 FHDC1Q9C0D6 1143 aaPredicted RBP12.3□□□□□ -0.44
EPB41-208ENST00000460378 OTUD7BQ6GQQ9 843 aa12.3□□□□□ -0.44
EPB41-208ENST00000460378 CASC1Q6TDU7 716 aa12.3□□□□□ -0.44
EPB41-208ENST00000460378 SLC52A2Q9HAB3 445 aa12.3□□□□□ -0.44
EPB41-208ENST00000460378 TULP4Q9NRJ4 1543 aa12.3□□□□□ -0.44
EPB41-208ENST00000460378 RTKN2Q8IZC4 609 aa12.29□□□□□ -0.44
EPB41-208ENST00000460378 CCDC85AQ96PX6 553 aaPredicted RBP12.29□□□□□ -0.44
EPB41-208ENST00000460378 CRKLP46109 303 aaKnown RBP12.29□□□□□ -0.44
EPB41-208ENST00000460378 NEUROD6Q96NK8 337 aa12.29□□□□□ -0.44
EPB41-208ENST00000460378 FGD1P98174 961 aa12.29□□□□□ -0.44
EPB41-208ENST00000460378 SULF1Q8IWU6 871 aa12.29□□□□□ -0.44
EPB41-208ENST00000460378 MARCH10Q8NA82 808 aaPredicted RBP12.29□□□□□ -0.44
EPB41-208ENST00000460378 TOMM22Q9NS69 142 aa12.29□□□□□ -0.44
EPB41-208ENST00000460378 KIF22Q14807 665 aa12.29□□□□□ -0.44
EPB41-208ENST00000460378 INSRP06213 1382 aa12.28□□□□□ -0.44
EPB41-208ENST00000460378 ANKRD18BA2A2Z9 1011 aa12.28□□□□□ -0.44
EPB41-208ENST00000460378 TNNI2P48788 182 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms