RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 EIF4A2Q14240 407 aaKnown RBP18.34■□□□□ 0.53
SRRT-206ENST00000460194 SLC4A9Q96Q91 983 aa18.34■□□□□ 0.53
SRRT-206ENST00000460194 IGSF1Q8N6C5 1336 aa18.33■□□□□ 0.53
SRRT-206ENST00000460194 IFNL2Q8IZJ0 200 aa18.33■□□□□ 0.52
SRRT-206ENST00000460194 TMOD3Q9NYL9 352 aa18.33■□□□□ 0.52
SRRT-206ENST00000460194 BRCA1P38398 1863 aaKnown RBP18.32■□□□□ 0.52
SRRT-206ENST00000460194 N4BP2Q86UW6 1770 aaPredicted RBP18.32■□□□□ 0.52
SRRT-206ENST00000460194 ATP6V1AP38606 617 aa18.3■□□□□ 0.52
SRRT-206ENST00000460194 GNPATO15228 680 aa18.29■□□□□ 0.52
SRRT-206ENST00000460194 C4AP0C0L4 1744 aa18.29■□□□□ 0.52
SRRT-206ENST00000460194 PXDNLA1KZ92 1463 aa18.28■□□□□ 0.52
SRRT-206ENST00000460194 KDM6AO15550 1401 aaPredicted RBP18.28■□□□□ 0.52
SRRT-206ENST00000460194 ERVV-2B6SEH9 535 aa18.27■□□□□ 0.52
SRRT-206ENST00000460194 MMP10P09238 476 aa18.26■□□□□ 0.51
SRRT-206ENST00000460194 RC3H1Q5TC82 1133 aaKnown RBP18.26■□□□□ 0.51
SRRT-206ENST00000460194 GPBP1L1Q9HC44 474 aaPredicted RBP18.26■□□□□ 0.51
SRRT-206ENST00000460194 WWC3Q9ULE0 1092 aa18.26■□□□□ 0.51
SRRT-206ENST00000460194 ADAMTS7Q9UKP4 1686 aa18.25■□□□□ 0.51
SRRT-206ENST00000460194 C10orf71Q711Q0 1435 aa18.25■□□□□ 0.51
SRRT-206ENST00000460194 DCAF5Q96JK2 942 aa18.25■□□□□ 0.51
SRRT-206ENST00000460194 CLSPNQ9HAW4 1339 aa18.24■□□□□ 0.51
SRRT-206ENST00000460194 KIF3CO14782 793 aa18.24■□□□□ 0.51
SRRT-206ENST00000460194 TNNT2P45379 298 aaPredicted RBP18.24■□□□□ 0.51
SRRT-206ENST00000460194 SCN11AQ9UI33 1791 aa18.24■□□□□ 0.51
SRRT-206ENST00000460194 CNTNAP4Q9C0A0 1308 aa18.23■□□□□ 0.51
SRRT-206ENST00000460194 TJP1Q07157 1748 aa18.23■□□□□ 0.51
SRRT-206ENST00000460194 GYS1P13807 737 aa18.23■□□□□ 0.51
SRRT-206ENST00000460194 TRAPPC3LQ5T215 181 aa18.23■□□□□ 0.51
SRRT-206ENST00000460194 ARHGEF1Q92888 912 aaKnown RBP18.23■□□□□ 0.51
SRRT-206ENST00000460194 ARFGEF1Q9Y6D6 1849 aa18.23■□□□□ 0.51
SRRT-206ENST00000460194 TGFB2P61812 414 aa18.22■□□□□ 0.51
SRRT-206ENST00000460194 RTCBQ9Y3I0 505 aaKnown RBP18.22■□□□□ 0.51
SRRT-206ENST00000460194 VIRMAQ69YN4 1812 aaKnown RBP18.21■□□□□ 0.51
SRRT-206ENST00000460194 RPS6KA4O75676 772 aa18.21■□□□□ 0.51
SRRT-206ENST00000460194 HSPA6P17066 643 aa18.21■□□□□ 0.51
SRRT-206ENST00000460194 ADRA2BP18089 450 aa18.21■□□□□ 0.51
SRRT-206ENST00000460194 NLGN1Q8N2Q7 840 aa18.21■□□□□ 0.51
SRRT-206ENST00000460194 PANK3Q9H999 370 aa18.21■□□□□ 0.51
SRRT-206ENST00000460194 HSP90AB1P08238 724 aaKnown RBP18.2■□□□□ 0.5
SRRT-206ENST00000460194 KCNA3P22001 575 aa18.2■□□□□ 0.5
SRRT-206ENST00000460194 PLEKHO1Q53GL0 409 aaPredicted RBP18.2■□□□□ 0.5
SRRT-206ENST00000460194 AEBP1Q8IUX7 1158 aa18.2■□□□□ 0.5
SRRT-206ENST00000460194 ZNF526Q8TF50 670 aaPredicted RBP18.2■□□□□ 0.5
SRRT-206ENST00000460194 A0A0G2JLW4 131 aa18.19■□□□□ 0.5
SRRT-206ENST00000460194 HSPA5P11021 654 aaKnown RBP18.19■□□□□ 0.5
SRRT-206ENST00000460194 RBM42Q9BTD8 480 aaKnown RBP18.19■□□□□ 0.5
SRRT-206ENST00000460194 AMOTQ4VCS5 1084 aa18.18■□□□□ 0.5
SRRT-206ENST00000460194 IFFO2Q5TF58 517 aa18.18■□□□□ 0.5
SRRT-206ENST00000460194 ZNF530Q6P9A1 599 aaPredicted RBP18.18■□□□□ 0.5
SRRT-206ENST00000460194 SBF1O95248 1867 aa18.17■□□□□ 0.5
SRRT-206ENST00000460194 DPEP1P16444 411 aa18.16■□□□□ 0.5
SRRT-206ENST00000460194 CABP4P57796 275 aa18.16■□□□□ 0.5
SRRT-206ENST00000460194 EIF4G2P78344 907 aaKnown RBP eCLIP18.16■□□□□ 0.5
SRRT-206ENST00000460194 NFATC2IPQ8NCF5 419 aa18.16■□□□□ 0.5
SRRT-206ENST00000460194 IL13P35225 146 aa18.15■□□□□ 0.5
SRRT-206ENST00000460194 POLR3GLQ9BT43 218 aa18.15■□□□□ 0.5
SRRT-206ENST00000460194 RFC4P35249 363 aa18.14■□□□□ 0.49
SRRT-206ENST00000460194 CRKLP46109 303 aaKnown RBP18.14■□□□□ 0.49
SRRT-206ENST00000460194 MTHFSP49914 203 aa18.14■□□□□ 0.49
SRRT-206ENST00000460194 BCS1LQ9Y276 419 aa18.14■□□□□ 0.49
SRRT-206ENST00000460194 USP42Q9H9J4 1324 aaKnown RBP18.14■□□□□ 0.49
SRRT-206ENST00000460194 PTCD1O75127 700 aaKnown RBP18.13■□□□□ 0.49
SRRT-206ENST00000460194 DDR1Q08345 913 aa18.13■□□□□ 0.49
SRRT-206ENST00000460194 INTS5Q6P9B9 1019 aaKnown RBP18.13■□□□□ 0.49
SRRT-206ENST00000460194 CCDC87Q9NVE4 849 aa18.13■□□□□ 0.49
SRRT-206ENST00000460194 AFDNP55196 1824 aaKnown RBP18.13■□□□□ 0.49
SRRT-206ENST00000460194 MRC1P22897 1456 aa18.13■□□□□ 0.49
SRRT-206ENST00000460194 NRXN2Q9P2S2 1712 aa18.12■□□□□ 0.49
SRRT-206ENST00000460194 FKBP8Q14318 412 aa18.12■□□□□ 0.49
SRRT-206ENST00000460194 SULT6B1Q6IMI4 303 aa18.12■□□□□ 0.49
SRRT-206ENST00000460194 SRP68Q9UHB9 627 aaKnown RBP18.12■□□□□ 0.49
SRRT-206ENST00000460194 TM4SF1P30408 202 aa18.11■□□□□ 0.49
SRRT-206ENST00000460194 AMER1Q5JTC6 1135 aaPredicted RBP18.11■□□□□ 0.49
SRRT-206ENST00000460194 MORC1Q86VD1 984 aa18.11■□□□□ 0.49
SRRT-206ENST00000460194 PARP3Q9Y6F1 533 aa18.11■□□□□ 0.49
SRRT-206ENST00000460194 C1orf141Q5JVX7 400 aa18.1■□□□□ 0.49
SRRT-206ENST00000460194 UBR2Q8IWV8 1755 aa18.09■□□□□ 0.49
SRRT-206ENST00000460194 KCPQ6ZWJ8 1503 aa18.09■□□□□ 0.49
SRRT-206ENST00000460194 TOMM70O94826 608 aa18.09■□□□□ 0.49
SRRT-206ENST00000460194 ARHGAP27Q6ZUM4 889 aa18.09■□□□□ 0.49
SRRT-206ENST00000460194 DNAJC5GQ8N7S2 189 aa18.09■□□□□ 0.49
SRRT-206ENST00000460194 LGR6Q9HBX8 967 aa18.09■□□□□ 0.49
SRRT-206ENST00000460194 POLRMTO00411 1230 aaKnown RBP18.08■□□□□ 0.48
SRRT-206ENST00000460194 FCHSD2O94868 740 aa18.08■□□□□ 0.48
SRRT-206ENST00000460194 AKAP4Q5JQC9 854 aa18.08■□□□□ 0.48
SRRT-206ENST00000460194 PCGF6Q9BYE7 350 aa18.08■□□□□ 0.48
SRRT-206ENST00000460194 NMRK2Q9NPI5 230 aa18.08■□□□□ 0.48
SRRT-206ENST00000460194 DLEC1Q9Y238 1755 aa18.08■□□□□ 0.48
SRRT-206ENST00000460194 DNAJC10Q8IXB1 793 aa18.07■□□□□ 0.48
SRRT-206ENST00000460194 SLC52A2Q9HAB3 445 aa18.07■□□□□ 0.48
SRRT-206ENST00000460194 SOS1Q07889 1333 aaPredicted RBP18.06■□□□□ 0.48
SRRT-206ENST00000460194 PIM2Q9P1W9 311 aa18.06■□□□□ 0.48
SRRT-206ENST00000460194 WDR90Q96KV7 1748 aa18.06■□□□□ 0.48
SRRT-206ENST00000460194 PER1O15534 1290 aaPredicted RBP18.05■□□□□ 0.48
SRRT-206ENST00000460194 CYP19A1P11511 503 aaPredicted RBP18.05■□□□□ 0.48
SRRT-206ENST00000460194 C9orf131Q5VYM1 1079 aa18.05■□□□□ 0.48
SRRT-206ENST00000460194 KNSTRNQ9Y448 316 aa18.05■□□□□ 0.48
SRRT-206ENST00000460194 RNMTO43148 476 aaKnown RBP18.04■□□□□ 0.48
SRRT-206ENST00000460194 CHRNA5P30532 468 aa18.04■□□□□ 0.48
SRRT-206ENST00000460194 APLP1P51693 650 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms