RNA–Protein interactions for RNA: ENST00000457839.6

MBD1-210, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MBD1, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-210ENST00000457839 SIRT2Q8IXJ6 389 aa20.63■□□□□ 0.89
MBD1-210ENST00000457839 STRN4Q9NRL3 753 aa20.63■□□□□ 0.89
MBD1-210ENST00000457839 FAM208AQ9UK61 1670 aaKnown RBP20.63■□□□□ 0.89
MBD1-210ENST00000457839 FLIIQ13045 1269 aa20.62■□□□□ 0.89
MBD1-210ENST00000457839 FKBP5Q13451 457 aaPredicted RBP20.62■□□□□ 0.89
MBD1-210ENST00000457839 C8orf34Q49A92 452 aa20.62■□□□□ 0.89
MBD1-210ENST00000457839 PHAXQ9H814 394 aaKnown RBP20.62■□□□□ 0.89
MBD1-210ENST00000457839 PRAMEF22A3QJZ6 481 aa20.61■□□□□ 0.89
MBD1-210ENST00000457839 PHKG2P15735 406 aa20.61■□□□□ 0.89
MBD1-210ENST00000457839 CYP27B1O15528 508 aa20.61■□□□□ 0.89
MBD1-210ENST00000457839 ANXA1P04083 346 aa20.61■□□□□ 0.89
MBD1-210ENST00000457839 MEIS3Q99687 375 aa20.61■□□□□ 0.89
MBD1-210ENST00000457839 SPG7Q9UQ90 795 aa20.61■□□□□ 0.89
MBD1-210ENST00000457839 SLC39A6Q13433 755 aa20.6■□□□□ 0.89
MBD1-210ENST00000457839 MSH5O43196 834 aa20.6■□□□□ 0.89
MBD1-210ENST00000457839 FAM161AQ3B820 660 aa20.59■□□□□ 0.89
MBD1-210ENST00000457839 SMC5Q8IY18 1101 aa20.59■□□□□ 0.89
MBD1-210ENST00000457839 NFATC2IPQ8NCF5 419 aa20.59■□□□□ 0.89
MBD1-210ENST00000457839 WDR17Q8IZU2 1322 aa20.59■□□□□ 0.89
MBD1-210ENST00000457839 USP35Q9P2H5 1018 aa20.59■□□□□ 0.89
MBD1-210ENST00000457839 KDM6AO15550 1401 aaPredicted RBP20.58■□□□□ 0.89
MBD1-210ENST00000457839 LARP1Q6PKG0 1096 aaKnown RBP20.58■□□□□ 0.89
MBD1-210ENST00000457839 CHMP4BQ9H444 224 aaKnown RBP20.58■□□□□ 0.89
MBD1-210ENST00000457839 CHPF2Q9P2E5 772 aa20.58■□□□□ 0.89
MBD1-210ENST00000457839 VIRMAQ69YN4 1812 aaKnown RBP20.58■□□□□ 0.88
MBD1-210ENST00000457839 IFNL2Q8IZJ0 200 aa20.57■□□□□ 0.88
MBD1-210ENST00000457839 NHSL1Q5SYE7 1610 aa20.57■□□□□ 0.88
MBD1-210ENST00000457839 EVA1CP58658 441 aa20.56■□□□□ 0.88
MBD1-210ENST00000457839 LNPKQ9C0E8 428 aa20.56■□□□□ 0.88
MBD1-210ENST00000457839 COL5A2P05997 1499 aaPredicted RBP20.56■□□□□ 0.88
MBD1-210ENST00000457839 KDM3BQ7LBC6 1761 aa20.56■□□□□ 0.88
MBD1-210ENST00000457839 SLC52A2Q9HAB3 445 aa20.55■□□□□ 0.88
MBD1-210ENST00000457839 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.55■□□□□ 0.881e-7■□□□□ 11
MBD1-210ENST00000457839 GIGYF1O75420 1035 aaPredicted RBP20.54■□□□□ 0.88
MBD1-210ENST00000457839 ANP32EQ9BTT0 268 aa20.54■□□□□ 0.88
MBD1-210ENST00000457839 ABCC6O95255 1503 aa20.54■□□□□ 0.88
MBD1-210ENST00000457839 ABCA3Q99758 1704 aa20.53■□□□□ 0.88
MBD1-210ENST00000457839 SOS1Q07889 1333 aaPredicted RBP20.53■□□□□ 0.88
MBD1-210ENST00000457839 ANKRD45Q5TZF3 282 aa20.53■□□□□ 0.88
MBD1-210ENST00000457839 ROBO1Q9Y6N7 1651 aa20.52■□□□□ 0.88
MBD1-210ENST00000457839 ANP32AP39687 249 aaKnown RBP20.52■□□□□ 0.88
MBD1-210ENST00000457839 PROSER3Q2NL68 480 aa20.52■□□□□ 0.88
MBD1-210ENST00000457839 ZNF790Q6PG37 636 aa20.52■□□□□ 0.88
MBD1-210ENST00000457839 OVOS2A0A0G2JMS6 1433 aa20.52■□□□□ 0.88
MBD1-210ENST00000457839 CCT4P50991 539 aaKnown RBP20.52■□□□□ 0.88
MBD1-210ENST00000457839 NUCB1Q02818 461 aa20.52■□□□□ 0.88
MBD1-210ENST00000457839 BTG4Q9NY30 223 aa20.52■□□□□ 0.88
MBD1-210ENST00000457839 DCAF5Q96JK2 942 aa20.51■□□□□ 0.87
MBD1-210ENST00000457839 HOXB7P09629 217 aa20.5■□□□□ 0.87
MBD1-210ENST00000457839 CEP85Q6P2H3 762 aa20.5■□□□□ 0.87
MBD1-210ENST00000457839 CHD1LQ86WJ1 897 aa20.5■□□□□ 0.87
MBD1-210ENST00000457839 ZCRB1Q8TBF4 217 aaKnown RBP20.5■□□□□ 0.87
MBD1-210ENST00000457839 DDX54Q8TDD1 881 aaKnown RBP20.5■□□□□ 0.87
MBD1-210ENST00000457839 LTBP4Q8N2S1 1624 aa20.5■□□□□ 0.87
MBD1-210ENST00000457839 ATP10DQ9P241 1426 aa20.5■□□□□ 0.87
MBD1-210ENST00000457839 SEC24BO95487 1268 aa20.49■□□□□ 0.87
MBD1-210ENST00000457839 CARD10Q9BWT7 1032 aa20.49■□□□□ 0.87
MBD1-210ENST00000457839 PIP4K2BP78356 416 aa20.49■□□□□ 0.87
MBD1-210ENST00000457839 SIPA1L3O60292 1781 aaPredicted RBP20.49■□□□□ 0.87
MBD1-210ENST00000457839 HEG1Q9ULI3 1381 aa20.48■□□□□ 0.87
MBD1-210ENST00000457839 PI4KAP2A4QPH2 592 aa20.48■□□□□ 0.87
MBD1-210ENST00000457839 IL2RBP14784 551 aa20.48■□□□□ 0.87
MBD1-210ENST00000457839 ANKRD44Q8N8A2 993 aa20.48■□□□□ 0.87
MBD1-210ENST00000457839 PI4KAP1Q8N8J0 262 aa20.48■□□□□ 0.87
MBD1-210ENST00000457839 ZNF496Q96IT1 587 aaPredicted RBP20.48■□□□□ 0.87
MBD1-210ENST00000457839 ADAMTS7Q9UKP4 1686 aa20.48■□□□□ 0.87
MBD1-210ENST00000457839 SCN11AQ9UI33 1791 aa20.48■□□□□ 0.87
MBD1-210ENST00000457839 APBB1O00213 710 aa20.48■□□□□ 0.87
MBD1-210ENST00000457839 GCC1Q96CN9 775 aa20.48■□□□□ 0.87
MBD1-210ENST00000457839 CABP4P57796 275 aa20.47■□□□□ 0.87
MBD1-210ENST00000457839 DBF4Q9UBU7 674 aaPredicted RBP20.47■□□□□ 0.87
MBD1-210ENST00000457839 PIP4K2AP48426 406 aaPredicted RBP20.46■□□□□ 0.87
MBD1-210ENST00000457839 CACNA1FO60840 1977 aa20.45■□□□□ 0.86
MBD1-210ENST00000457839 RPAP2Q8IXW5 612 aaPredicted RBP20.45■□□□□ 0.86
MBD1-210ENST00000457839 PKD1L3Q7Z443 1732 aa20.45■□□□□ 0.86
MBD1-210ENST00000457839 PCDH11XQ9BZA7 1347 aa20.45■□□□□ 0.86
MBD1-210ENST00000457839 PCDH11YQ9BZA8 1340 aa20.45■□□□□ 0.86
MBD1-210ENST00000457839 AIMP1Q12904 312 aaKnown RBP20.45■□□□□ 0.86
MBD1-210ENST00000457839 USP44Q9H0E7 712 aa20.45■□□□□ 0.86
MBD1-210ENST00000457839 ADAMTS2O95450 1211 aa20.44■□□□□ 0.86
MBD1-210ENST00000457839 TTC5Q8N0Z6 440 aa20.44■□□□□ 0.86
MBD1-210ENST00000457839 DCTPP1Q9H773 170 aa20.44■□□□□ 0.86
MBD1-210ENST00000457839 HSP90AB1P08238 724 aaKnown RBP20.44■□□□□ 0.86
MBD1-210ENST00000457839 IPO9Q96P70 1041 aaKnown RBP20.44■□□□□ 0.86
MBD1-210ENST00000457839 USP16Q9Y5T5 823 aa20.44■□□□□ 0.86
MBD1-210ENST00000457839 GNAI2P04899 355 aa20.43■□□□□ 0.86
MBD1-210ENST00000457839 MYL6BP14649 208 aa20.43■□□□□ 0.86
MBD1-210ENST00000457839 DNAAF4Q8WXU2 420 aa20.43■□□□□ 0.86
MBD1-210ENST00000457839 ADCY9O60503 1353 aa20.42■□□□□ 0.86
MBD1-210ENST00000457839 PDIA6Q15084 440 aa20.42■□□□□ 0.86
MBD1-210ENST00000457839 LRRFIP2Q9Y608 721 aaKnown RBP20.42■□□□□ 0.86
MBD1-210ENST00000457839 SMARCA5O60264 1052 aaPredicted RBP20.42■□□□□ 0.86
MBD1-210ENST00000457839 C16orf71Q8IYS4 520 aaPredicted RBP20.42■□□□□ 0.86
MBD1-210ENST00000457839 SRCIN1Q9C0H9 1055 aa20.42■□□□□ 0.86
MBD1-210ENST00000457839 MAP3K2Q9Y2U5 619 aa20.41■□□□□ 0.86
MBD1-210ENST00000457839 PNMA6EA0A0J9YXQ4 647 aa20.41■□□□□ 0.86
MBD1-210ENST00000457839 BEND3Q5T5X7 828 aa20.41■□□□□ 0.86
MBD1-210ENST00000457839 GNAI3P08754 354 aa20.4■□□□□ 0.86
MBD1-210ENST00000457839 CHMP4AQ9BY43 222 aa20.4■□□□□ 0.86
MBD1-210ENST00000457839 NUTM2BA6NNL0 878 aaPredicted RBP20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms