RNA–Protein interactions for RNA: ENST00000457463.1

CNOT3-205, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 3

Gene CNOT3, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-205ENST00000457463 LY75O60449 1722 aa16.21■□□□□ 0.19
CNOT3-205ENST00000457463 SLC27A3Q5K4L6 730 aa16.2■□□□□ 0.18
CNOT3-205ENST00000457463 SMARCC1Q92922 1105 aaPredicted RBP16.2■□□□□ 0.18
CNOT3-205ENST00000457463 MRS2Q9HD23 443 aa16.2■□□□□ 0.18
CNOT3-205ENST00000457463 RRP7AQ9Y3A4 280 aaKnown RBP16.2■□□□□ 0.18
CNOT3-205ENST00000457463 MRC1P22897 1456 aa16.2■□□□□ 0.18
CNOT3-205ENST00000457463 PAPPAQ13219 1627 aa16.19■□□□□ 0.18
CNOT3-205ENST00000457463 CEMIPQ8WUJ3 1361 aa16.19■□□□□ 0.18
CNOT3-205ENST00000457463 LOC102724428A0A0B4J2F2 783 aa16.19■□□□□ 0.18
CNOT3-205ENST00000457463 SIK1P57059 783 aa16.19■□□□□ 0.18
CNOT3-205ENST00000457463 ITPK1Q13572 414 aa16.19■□□□□ 0.18
CNOT3-205ENST00000457463 NFE2L2Q16236 605 aa16.19■□□□□ 0.18
CNOT3-205ENST00000457463 NBPF14Q5TI25 921 aa16.19■□□□□ 0.18
CNOT3-205ENST00000457463 PNISRQ8TF01 805 aaKnown RBP16.19■□□□□ 0.18
CNOT3-205ENST00000457463 THUMPD2Q9BTF0 503 aaKnown RBP16.19■□□□□ 0.18
CNOT3-205ENST00000457463 PDGFDQ9GZP0 370 aaPredicted RBP16.19■□□□□ 0.18
CNOT3-205ENST00000457463 MAPK8IP3Q9UPT6 1336 aa16.19■□□□□ 0.18
CNOT3-205ENST00000457463 SENP3-EIF4A1A0A087X0R7 540 aa16.18■□□□□ 0.18
CNOT3-205ENST00000457463 SLC15A2Q16348 729 aa16.18■□□□□ 0.18
CNOT3-205ENST00000457463 RBM42Q9BTD8 480 aaKnown RBP16.18■□□□□ 0.18
CNOT3-205ENST00000457463 PTCD1O75127 700 aaKnown RBP16.17■□□□□ 0.18
CNOT3-205ENST00000457463 NEFMP07197 916 aa16.17■□□□□ 0.18
CNOT3-205ENST00000457463 AKT1S1Q96B36 256 aa16.17■□□□□ 0.18
CNOT3-205ENST00000457463 RUNDC1Q96C34 613 aa16.17■□□□□ 0.18
CNOT3-205ENST00000457463 PNNQ9H307 717 aaKnown RBP16.17■□□□□ 0.18
CNOT3-205ENST00000457463 VIRMAQ69YN4 1812 aaKnown RBP16.17■□□□□ 0.18
CNOT3-205ENST00000457463 KCNQ3O43525 872 aa16.16■□□□□ 0.18
CNOT3-205ENST00000457463 ATP6V1AP38606 617 aa16.16■□□□□ 0.18
CNOT3-205ENST00000457463 TMPOP42166 694 aaKnown RBP16.16■□□□□ 0.18
CNOT3-205ENST00000457463 NEUROD2Q15784 382 aa16.16■□□□□ 0.18
CNOT3-205ENST00000457463 SMIM5Q71RC9 77 aa16.16■□□□□ 0.18
CNOT3-205ENST00000457463 LINC00116Q8NCU8 138 aa16.16■□□□□ 0.18
CNOT3-205ENST00000457463 RTF1Q92541 710 aaKnown RBP16.16■□□□□ 0.18
CNOT3-205ENST00000457463 STK32BQ9NY57 414 aa16.16■□□□□ 0.18
CNOT3-205ENST00000457463 RIPK4P57078 832 aa16.15■□□□□ 0.18
CNOT3-205ENST00000457463 TEFQ10587 303 aa16.15■□□□□ 0.18
CNOT3-205ENST00000457463 AMIGO3Q86WK7 504 aa16.15■□□□□ 0.18
CNOT3-205ENST00000457463 HTATSF1O43719 755 aaKnown RBP16.14■□□□□ 0.17
CNOT3-205ENST00000457463 MIS18AQ9NYP9 233 aa16.14■□□□□ 0.17
CNOT3-205ENST00000457463 DLG5Q8TDM6 1919 aa16.13■□□□□ 0.17
CNOT3-205ENST00000457463 APAF1O14727 1248 aa16.13■□□□□ 0.17
CNOT3-205ENST00000457463 KCPQ6ZWJ8 1503 aa16.13■□□□□ 0.17
CNOT3-205ENST00000457463 SRCAPQ6ZRS2 3230 aa16.12■□□□□ 0.17
CNOT3-205ENST00000457463 BTBD11A6QL63 1104 aa16.12■□□□□ 0.17
CNOT3-205ENST00000457463 DIEXFQ68CQ4 756 aaKnown RBP16.12■□□□□ 0.17
CNOT3-205ENST00000457463 TRIM35Q9UPQ4 493 aa16.12■□□□□ 0.17
CNOT3-205ENST00000457463 SIPA1L3O60292 1781 aaPredicted RBP16.12■□□□□ 0.17
CNOT3-205ENST00000457463 C5P01031 1676 aa16.11■□□□□ 0.17
CNOT3-205ENST00000457463 ZNF790Q6PG37 636 aa16.11■□□□□ 0.17
CNOT3-205ENST00000457463 DNAJC10Q8IXB1 793 aa16.11■□□□□ 0.17
CNOT3-205ENST00000457463 ZNF496Q96IT1 587 aaPredicted RBP16.11■□□□□ 0.17
CNOT3-205ENST00000457463 PNPLA7Q6ZV29 1317 aa16.11■□□□□ 0.17
CNOT3-205ENST00000457463 FAM9BQ8IZU0 186 aa16.1■□□□□ 0.17
CNOT3-205ENST00000457463 TFCP2L1Q9NZI6 479 aa16.1■□□□□ 0.17
CNOT3-205ENST00000457463 C4BP0C0L5 1744 aa16.1■□□□□ 0.17
CNOT3-205ENST00000457463 TAF1LQ8IZX4 1826 aa16.1■□□□□ 0.17
CNOT3-205ENST00000457463 TAF7Q15545 349 aaPredicted RBP16.09■□□□□ 0.17
CNOT3-205ENST00000457463 TTC5Q8N0Z6 440 aa16.09■□□□□ 0.17
CNOT3-205ENST00000457463 PRAMEF22A3QJZ6 481 aa16.08■□□□□ 0.16
CNOT3-205ENST00000457463 ZBTB7AO95365 584 aa16.08■□□□□ 0.16
CNOT3-205ENST00000457463 COL23A1Q86Y22 540 aaPredicted RBP16.08■□□□□ 0.16
CNOT3-205ENST00000457463 MIER1Q8N108 512 aa16.08■□□□□ 0.16
CNOT3-205ENST00000457463 TJP1Q07157 1748 aa16.08■□□□□ 0.16
CNOT3-205ENST00000457463 CASZ1Q86V15 1759 aa16.08■□□□□ 0.16
CNOT3-205ENST00000457463 TUBGCP6Q96RT7 1819 aa16.08■□□□□ 0.16
CNOT3-205ENST00000457463 GNPATO15228 680 aa16.07■□□□□ 0.16
CNOT3-205ENST00000457463 PHF14O94880 888 aa16.07■□□□□ 0.16
CNOT3-205ENST00000457463 AK7Q96M32 723 aa16.07■□□□□ 0.16
CNOT3-205ENST00000457463 UBR2Q8IWV8 1755 aa16.06■□□□□ 0.16
CNOT3-205ENST00000457463 HEG1Q9ULI3 1381 aa16.06■□□□□ 0.16
CNOT3-205ENST00000457463 ATF5Q9Y2D1 282 aaPredicted RBP16.06■□□□□ 0.16
CNOT3-205ENST00000457463 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.05■□□□□ 0.16
CNOT3-205ENST00000457463 CYP19A1P11511 503 aaPredicted RBP16.05■□□□□ 0.16
CNOT3-205ENST00000457463 CRKLP46109 303 aaKnown RBP16.05■□□□□ 0.16
CNOT3-205ENST00000457463 INTS5Q6P9B9 1019 aaKnown RBP16.05■□□□□ 0.16
CNOT3-205ENST00000457463 FMNL2Q96PY5 1086 aa16.05■□□□□ 0.16
CNOT3-205ENST00000457463 COL5A3P25940 1745 aaPredicted RBP16.05■□□□□ 0.16
CNOT3-205ENST00000457463 ZNF831Q5JPB2 1677 aa16.05■□□□□ 0.16
CNOT3-205ENST00000457463 CNTNAP4Q9C0A0 1308 aa16.04■□□□□ 0.16
CNOT3-205ENST00000457463 LMOD3Q0VAK6 560 aa16.04■□□□□ 0.16
CNOT3-205ENST00000457463 SALL2Q9Y467 1007 aaPredicted RBP16.04■□□□□ 0.16
CNOT3-205ENST00000457463 MSH5O43196 834 aa16.03■□□□□ 0.16
CNOT3-205ENST00000457463 RC3H1Q5TC82 1133 aaKnown RBP16.03■□□□□ 0.16
CNOT3-205ENST00000457463 VSIG10Q8N0Z9 540 aa16.03■□□□□ 0.16
CNOT3-205ENST00000457463 ZBTB1Q9Y2K1 713 aa16.03■□□□□ 0.16
CNOT3-205ENST00000457463 USP16Q9Y5T5 823 aa16.03■□□□□ 0.16
CNOT3-205ENST00000457463 MYH14Q7Z406 1995 aaKnown RBP16.03■□□□□ 0.16
CNOT3-205ENST00000457463 CICQ96RK0 1608 aaPredicted RBP16.02■□□□□ 0.16
CNOT3-205ENST00000457463 CCER2I3L3R5 266 aa16.02■□□□□ 0.16
CNOT3-205ENST00000457463 EIF4A1P60842 406 aaKnown RBP16.02■□□□□ 0.16
CNOT3-205ENST00000457463 TSPYL4Q9UJ04 414 aa16.02■□□□□ 0.16
CNOT3-205ENST00000457463 LAS1LQ9Y4W2 734 aaKnown RBP16.02■□□□□ 0.16
CNOT3-205ENST00000457463 UBR3Q6ZT12 1888 aa16.01■□□□□ 0.15
CNOT3-205ENST00000457463 KDM3BQ7LBC6 1761 aa16.01■□□□□ 0.15
CNOT3-205ENST00000457463 RPS6KA4O75676 772 aa16.01■□□□□ 0.15
CNOT3-205ENST00000457463 PTGER2P43116 358 aa16.01■□□□□ 0.15
CNOT3-205ENST00000457463 PIP4K2AP48426 406 aaPredicted RBP16.01■□□□□ 0.15
CNOT3-205ENST00000457463 MSL1Q68DK7 614 aa16.01■□□□□ 0.15
CNOT3-205ENST00000457463 ARHGEF1Q92888 912 aaKnown RBP16.01■□□□□ 0.15
CNOT3-205ENST00000457463 CCDC87Q9NVE4 849 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms