RNA–Protein interactions for RNA: ENST00000457232.5

HNF4A-206, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-206ENST00000457232 KIF7Q2M1P5 1343 aa17.47■□□□□ 0.39
HNF4A-206ENST00000457232 AEBP1Q8IUX7 1158 aa17.47■□□□□ 0.39
HNF4A-206ENST00000457232 CICQ96RK0 1608 aaPredicted RBP17.46■□□□□ 0.39
HNF4A-206ENST00000457232 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.46■□□□□ 0.38
HNF4A-206ENST00000457232 PHF14O94880 888 aa17.46■□□□□ 0.38
HNF4A-206ENST00000457232 AMER1Q5JTC6 1135 aaPredicted RBP17.46■□□□□ 0.38
HNF4A-206ENST00000457232 C4AP0C0L4 1744 aa17.45■□□□□ 0.38
HNF4A-206ENST00000457232 MYH14Q7Z406 1995 aaKnown RBP17.45■□□□□ 0.38
HNF4A-206ENST00000457232 TJP1Q07157 1748 aa17.45■□□□□ 0.38
HNF4A-206ENST00000457232 KIAA1551Q9HCM1 1747 aa17.45■□□□□ 0.38
HNF4A-206ENST00000457232 YBX3P16989 372 aaKnown RBP eCLIP17.45■□□□□ 0.38
HNF4A-206ENST00000457232 SSFA2P28290 1259 aa17.45■□□□□ 0.38
HNF4A-206ENST00000457232 SLC4A9Q96Q91 983 aa17.45■□□□□ 0.38
HNF4A-206ENST00000457232 KIF13BQ9NQT8 1826 aa17.44■□□□□ 0.38
HNF4A-206ENST00000457232 ERVV-2B6SEH9 535 aa17.44■□□□□ 0.38
HNF4A-206ENST00000457232 ATP6V1AP38606 617 aa17.44■□□□□ 0.38
HNF4A-206ENST00000457232 PELP1Q8IZL8 1130 aaKnown RBP17.44■□□□□ 0.38
HNF4A-206ENST00000457232 DCAF5Q96JK2 942 aa17.44■□□□□ 0.38
HNF4A-206ENST00000457232 KNSTRNQ9Y448 316 aa17.44■□□□□ 0.38
HNF4A-206ENST00000457232 IL13P35225 146 aa17.43■□□□□ 0.38
HNF4A-206ENST00000457232 PLEKHO1Q53GL0 409 aaPredicted RBP17.43■□□□□ 0.38
HNF4A-206ENST00000457232 ZNF530Q6P9A1 599 aaPredicted RBP17.43■□□□□ 0.38
HNF4A-206ENST00000457232 CD2APQ9Y5K6 639 aa17.43■□□□□ 0.38
HNF4A-206ENST00000457232 GNPATO15228 680 aa17.42■□□□□ 0.38
HNF4A-206ENST00000457232 HSP90AB1P08238 724 aaKnown RBP17.42■□□□□ 0.38
HNF4A-206ENST00000457232 ADAMTS7Q9UKP4 1686 aa17.41■□□□□ 0.38
HNF4A-206ENST00000457232 AMOTQ4VCS5 1084 aa17.41■□□□□ 0.38
HNF4A-206ENST00000457232 PER1O15534 1290 aaPredicted RBP17.4■□□□□ 0.38
HNF4A-206ENST00000457232 SULT6B1Q6IMI4 303 aa17.4■□□□□ 0.38
HNF4A-206ENST00000457232 MRC1P22897 1456 aa17.38■□□□□ 0.37
HNF4A-206ENST00000457232 N4BP2Q86UW6 1770 aaPredicted RBP17.38■□□□□ 0.37
HNF4A-206ENST00000457232 CNTNAP4Q9C0A0 1308 aa17.37■□□□□ 0.37
HNF4A-206ENST00000457232 GRIN3BO60391 1043 aa17.37■□□□□ 0.37
HNF4A-206ENST00000457232 MTHFSP49914 203 aa17.37■□□□□ 0.37
HNF4A-206ENST00000457232 CABP4P57796 275 aa17.37■□□□□ 0.37
HNF4A-206ENST00000457232 RBM42Q9BTD8 480 aaKnown RBP17.37■□□□□ 0.37
HNF4A-206ENST00000457232 COL3A1P02461 1466 aaPredicted RBP17.37■□□□□ 0.37
HNF4A-206ENST00000457232 BRCA1P38398 1863 aaKnown RBP17.36■□□□□ 0.37
HNF4A-206ENST00000457232 C1orf141Q5JVX7 400 aa17.36■□□□□ 0.37
HNF4A-206ENST00000457232 RC3H1Q5TC82 1133 aaKnown RBP17.35■□□□□ 0.37
HNF4A-206ENST00000457232 UBR2Q8IWV8 1755 aa17.34■□□□□ 0.37
HNF4A-206ENST00000457232 NFATC2IPQ8NCF5 419 aa17.34■□□□□ 0.37
HNF4A-206ENST00000457232 RTCBQ9Y3I0 505 aaKnown RBP17.34■□□□□ 0.37
HNF4A-206ENST00000457232 PXDNLA1KZ92 1463 aa17.33■□□□□ 0.37
HNF4A-206ENST00000457232 MMP10P09238 476 aa17.33■□□□□ 0.36
HNF4A-206ENST00000457232 ARHGEF1Q92888 912 aaKnown RBP17.33■□□□□ 0.36
HNF4A-206ENST00000457232 NPC1L1Q9UHC9 1359 aa17.33■□□□□ 0.36
HNF4A-206ENST00000457232 C10orf71Q711Q0 1435 aa17.32■□□□□ 0.36
HNF4A-206ENST00000457232 KCPQ6ZWJ8 1503 aa17.32■□□□□ 0.36
HNF4A-206ENST00000457232 PTCD1O75127 700 aaKnown RBP17.32■□□□□ 0.36
HNF4A-206ENST00000457232 RPS6KA4O75676 772 aa17.32■□□□□ 0.36
HNF4A-206ENST00000457232 ADRA2BP18089 450 aa17.32■□□□□ 0.36
HNF4A-206ENST00000457232 AKAP4Q5JQC9 854 aa17.32■□□□□ 0.36
HNF4A-206ENST00000457232 CC2D1BQ5T0F9 858 aaKnown RBP17.32■□□□□ 0.36
HNF4A-206ENST00000457232 TRAPPC3LQ5T215 181 aa17.32■□□□□ 0.36
HNF4A-206ENST00000457232 ADCY9O60503 1353 aa17.32■□□□□ 0.36
HNF4A-206ENST00000457232 HMOX1P09601 288 aa17.31■□□□□ 0.36
HNF4A-206ENST00000457232 SIPA1L3O60292 1781 aaPredicted RBP17.31■□□□□ 0.36
HNF4A-206ENST00000457232 ATP10DQ9P241 1426 aa17.31■□□□□ 0.36
HNF4A-206ENST00000457232 GYS1P13807 737 aa17.3■□□□□ 0.36
HNF4A-206ENST00000457232 C1QTNF8P60827 252 aa17.3■□□□□ 0.36
HNF4A-206ENST00000457232 LGR6Q9HBX8 967 aa17.3■□□□□ 0.36
HNF4A-206ENST00000457232 WWC3Q9ULE0 1092 aa17.3■□□□□ 0.36
HNF4A-206ENST00000457232 CRKLP46109 303 aaKnown RBP17.29■□□□□ 0.36
HNF4A-206ENST00000457232 NLGN1Q8N2Q7 840 aa17.29■□□□□ 0.36
HNF4A-206ENST00000457232 SLC52A2Q9HAB3 445 aa17.29■□□□□ 0.36
HNF4A-206ENST00000457232 DIAPH1O60610 1272 aaKnown RBP17.28■□□□□ 0.36
HNF4A-206ENST00000457232 MTHFSDQ2M296 383 aaKnown RBP17.28■□□□□ 0.36
HNF4A-206ENST00000457232 ARFGEF1Q9Y6D6 1849 aa17.28■□□□□ 0.36
HNF4A-206ENST00000457232 RNMTO43148 476 aaKnown RBP17.27■□□□□ 0.36
HNF4A-206ENST00000457232 GIGYF1O75420 1035 aaPredicted RBP17.26■□□□□ 0.35
HNF4A-206ENST00000457232 RFC4P35249 363 aa17.26■□□□□ 0.35
HNF4A-206ENST00000457232 INTS5Q6P9B9 1019 aaKnown RBP17.26■□□□□ 0.35
HNF4A-206ENST00000457232 USP42Q9H9J4 1324 aaKnown RBP17.26■□□□□ 0.35
HNF4A-206ENST00000457232 AFDNP55196 1824 aaKnown RBP17.26■□□□□ 0.35
HNF4A-206ENST00000457232 DNAJC10Q8IXB1 793 aa17.25■□□□□ 0.35
HNF4A-206ENST00000457232 SRP68Q9UHB9 627 aaKnown RBP17.25■□□□□ 0.35
HNF4A-206ENST00000457232 SLC39A6Q13433 755 aa17.24■□□□□ 0.35
HNF4A-206ENST00000457232 NRXN2Q9P2S2 1712 aa17.24■□□□□ 0.35
HNF4A-206ENST00000457232 TGFB2P61812 414 aa17.23■□□□□ 0.35
HNF4A-206ENST00000457232 DDR1Q08345 913 aa17.22■□□□□ 0.35
HNF4A-206ENST00000457232 FKBP8Q14318 412 aa17.22■□□□□ 0.35
HNF4A-206ENST00000457232 CCDC87Q9NVE4 849 aa17.22■□□□□ 0.35
HNF4A-206ENST00000457232 SOS1Q07889 1333 aaPredicted RBP17.22■□□□□ 0.35
HNF4A-206ENST00000457232 SENP3-EIF4A1A0A087X0R7 540 aa17.21■□□□□ 0.35
HNF4A-206ENST00000457232 A0A0G2JLW4 131 aa17.21■□□□□ 0.35
HNF4A-206ENST00000457232 CYP19A1P11511 503 aaPredicted RBP17.21■□□□□ 0.35
HNF4A-206ENST00000457232 CNGB1Q14028 1251 aaPredicted RBP17.21■□□□□ 0.35
HNF4A-206ENST00000457232 PARP3Q9Y6F1 533 aa17.21■□□□□ 0.35
HNF4A-206ENST00000457232 DLEC1Q9Y238 1755 aa17.21■□□□□ 0.35
HNF4A-206ENST00000457232 DPEP1P16444 411 aa17.21■□□□□ 0.34
HNF4A-206ENST00000457232 SCN7AQ01118 1682 aa17.2■□□□□ 0.34
HNF4A-206ENST00000457232 KCNA3P22001 575 aa17.2■□□□□ 0.34
HNF4A-206ENST00000457232 U2SURPO15042 1029 aaKnown RBP17.19■□□□□ 0.34
HNF4A-206ENST00000457232 ZBTB1Q9Y2K1 713 aa17.19■□□□□ 0.34
HNF4A-206ENST00000457232 COL15A1P39059 1388 aa17.19■□□□□ 0.34
HNF4A-206ENST00000457232 POLRMTO00411 1230 aaKnown RBP17.18■□□□□ 0.34
HNF4A-206ENST00000457232 TM4SF1P30408 202 aa17.18■□□□□ 0.34
HNF4A-206ENST00000457232 USPL1Q5W0Q7 1092 aa17.18■□□□□ 0.34
HNF4A-206ENST00000457232 VSIG10Q8N0Z9 540 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms