RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 RC3H1Q5TC82 1133 aaKnown RBP11.96□□□□□ -0.49
PKP4-207ENST00000457109 NCAPD2Q15021 1401 aa11.95□□□□□ -0.5
PKP4-207ENST00000457109 RGPD2P0DJD1 1756 aa11.95□□□□□ -0.5
PKP4-207ENST00000457109 PTCD1O75127 700 aaKnown RBP11.95□□□□□ -0.5
PKP4-207ENST00000457109 ADRA2BP18089 450 aa11.95□□□□□ -0.5
PKP4-207ENST00000457109 SMIM5Q71RC9 77 aa11.95□□□□□ -0.5
PKP4-207ENST00000457109 NFATC2IPQ8NCF5 419 aa11.95□□□□□ -0.5
PKP4-207ENST00000457109 MMP10P09238 476 aa11.94□□□□□ -0.5
PKP4-207ENST00000457109 PARP3Q9Y6F1 533 aa11.94□□□□□ -0.5
PKP4-207ENST00000457109 RPS6KA4O75676 772 aa11.93□□□□□ -0.5
PKP4-207ENST00000457109 GPBP1L1Q9HC44 474 aaPredicted RBP11.93□□□□□ -0.5
PKP4-207ENST00000457109 CCDC87Q9NVE4 849 aa11.93□□□□□ -0.5
PKP4-207ENST00000457109 WWC3Q9ULE0 1092 aa11.93□□□□□ -0.5
PKP4-207ENST00000457109 LY75O60449 1722 aa11.93□□□□□ -0.5
PKP4-207ENST00000457109 IL13P35225 146 aa11.92□□□□□ -0.5
PKP4-207ENST00000457109 TGFB2P61812 414 aa11.92□□□□□ -0.5
PKP4-207ENST00000457109 AKAP4Q5JQC9 854 aa11.92□□□□□ -0.5
PKP4-207ENST00000457109 AMIGO3Q86WK7 504 aa11.92□□□□□ -0.5
PKP4-207ENST00000457109 AEBP1Q8IUX7 1158 aa11.92□□□□□ -0.5
PKP4-207ENST00000457109 ARHGEF1Q92888 912 aaKnown RBP11.92□□□□□ -0.5
PKP4-207ENST00000457109 DIAPH1O60610 1272 aaKnown RBP11.91□□□□□ -0.5
PKP4-207ENST00000457109 CNGB1Q14028 1251 aaPredicted RBP11.91□□□□□ -0.5
PKP4-207ENST00000457109 CC2D1BQ5T0F9 858 aaKnown RBP11.91□□□□□ -0.5
PKP4-207ENST00000457109 QSER1Q2KHR3 1735 aa11.91□□□□□ -0.5
PKP4-207ENST00000457109 CNTNAP4Q9C0A0 1308 aa11.9□□□□□ -0.5
PKP4-207ENST00000457109 ZPR1O75312 459 aa11.9□□□□□ -0.5
PKP4-207ENST00000457109 HMOX1P09601 288 aa11.9□□□□□ -0.5
PKP4-207ENST00000457109 ZNF526Q8TF50 670 aaPredicted RBP11.9□□□□□ -0.5
PKP4-207ENST00000457109 SHANK3Q9BYB0 1731 aa11.9□□□□□ -0.5
PKP4-207ENST00000457109 BCS1LQ9Y276 419 aa11.9□□□□□ -0.5
PKP4-207ENST00000457109 KIF7Q2M1P5 1343 aa11.89□□□□□ -0.51
PKP4-207ENST00000457109 C4BP0C0L5 1744 aa11.89□□□□□ -0.51
PKP4-207ENST00000457109 CRKLP46109 303 aaKnown RBP11.89□□□□□ -0.51
PKP4-207ENST00000457109 AMER1Q5JTC6 1135 aaPredicted RBP11.89□□□□□ -0.51
PKP4-207ENST00000457109 ARHGAP27Q6ZUM4 889 aa11.89□□□□□ -0.51
PKP4-207ENST00000457109 C5P01031 1676 aa11.88□□□□□ -0.51
PKP4-207ENST00000457109 A0A0G2JLW4 131 aa11.88□□□□□ -0.51
PKP4-207ENST00000457109 U2SURPO15042 1029 aaKnown RBP11.88□□□□□ -0.51
PKP4-207ENST00000457109 GYS1P13807 737 aa11.88□□□□□ -0.51
PKP4-207ENST00000457109 NPM2Q86SE8 214 aaKnown RBP11.88□□□□□ -0.51
PKP4-207ENST00000457109 SLC4A9Q96Q91 983 aa11.88□□□□□ -0.51
PKP4-207ENST00000457109 SLC52A2Q9HAB3 445 aa11.88□□□□□ -0.51
PKP4-207ENST00000457109 PKD1L3Q7Z443 1732 aa11.88□□□□□ -0.51
PKP4-207ENST00000457109 MAP2P11137 1827 aaKnown RBP11.88□□□□□ -0.51
PKP4-207ENST00000457109 RNMTO43148 476 aaKnown RBP11.87□□□□□ -0.51
PKP4-207ENST00000457109 FCHSD2O94868 740 aa11.87□□□□□ -0.51
PKP4-207ENST00000457109 TTC5Q8N0Z6 440 aa11.87□□□□□ -0.51
PKP4-207ENST00000457109 CFAP53Q96M91 514 aa11.87□□□□□ -0.51
PKP4-207ENST00000457109 LGR6Q9HBX8 967 aa11.86□□□□□ -0.51
PKP4-207ENST00000457109 PIM2Q9P1W9 311 aa11.86□□□□□ -0.51
PKP4-207ENST00000457109 ATP10DQ9P241 1426 aa11.86□□□□□ -0.51
PKP4-207ENST00000457109 KDRP35968 1356 aa11.85□□□□□ -0.51
PKP4-207ENST00000457109 STARD3NLO95772 234 aa11.85□□□□□ -0.51
PKP4-207ENST00000457109 DPEP1P16444 411 aa11.85□□□□□ -0.51
PKP4-207ENST00000457109 TEFQ10587 303 aa11.85□□□□□ -0.51
PKP4-207ENST00000457109 NUDCQ9Y266 331 aa11.85□□□□□ -0.51
PKP4-207ENST00000457109 KDM6AO15550 1401 aaPredicted RBP11.85□□□□□ -0.51
PKP4-207ENST00000457109 PER1O15534 1290 aaPredicted RBP11.84□□□□□ -0.51
PKP4-207ENST00000457109 SLC39A6Q13433 755 aa11.84□□□□□ -0.51
PKP4-207ENST00000457109 MTHFSDQ2M296 383 aaKnown RBP11.84□□□□□ -0.51
PKP4-207ENST00000457109 DALRD3Q5D0E6 543 aaKnown RBP11.84□□□□□ -0.51
PKP4-207ENST00000457109 DNAJC10Q8IXB1 793 aa11.84□□□□□ -0.51
PKP4-207ENST00000457109 GAS2L2Q8NHY3 880 aa11.84□□□□□ -0.51
PKP4-207ENST00000457109 SRP68Q9UHB9 627 aaKnown RBP11.84□□□□□ -0.51
PKP4-207ENST00000457109 CHD4Q14839 1912 aa11.84□□□□□ -0.51
PKP4-207ENST00000457109 ANKRD26Q9UPS8 1709 aa11.83□□□□□ -0.52
PKP4-207ENST00000457109 TOGARAM1Q9Y4F4 1720 aa11.83□□□□□ -0.52
PKP4-207ENST00000457109 A0A087WZG4 1122 aa11.83□□□□□ -0.52
PKP4-207ENST00000457109 GNAT3A8MTJ3 354 aa11.83□□□□□ -0.52
PKP4-207ENST00000457109 FKBP8Q14318 412 aa11.83□□□□□ -0.52
PKP4-207ENST00000457109 USPL1Q5W0Q7 1092 aa11.83□□□□□ -0.52
PKP4-207ENST00000457109 INTS5Q6P9B9 1019 aaKnown RBP11.83□□□□□ -0.52
PKP4-207ENST00000457109 VSIG10Q8N0Z9 540 aa11.83□□□□□ -0.52
PKP4-207ENST00000457109 TEX13AQ9BXU3 409 aaPredicted RBP11.83□□□□□ -0.52
PKP4-207ENST00000457109 ITGB4P16144 1822 aa11.83□□□□□ -0.52
PKP4-207ENST00000457109 TUBGCP6Q96RT7 1819 aa11.83□□□□□ -0.52
PKP4-207ENST00000457109 USP42Q9H9J4 1324 aaKnown RBP11.83□□□□□ -0.52
PKP4-207ENST00000457109 COL24A1Q17RW2 1714 aa11.83□□□□□ -0.52
PKP4-207ENST00000457109 C16orf71Q8IYS4 520 aaPredicted RBP11.82□□□□□ -0.52
PKP4-207ENST00000457109 UTRNP46939 3433 aa11.82□□□□□ -0.52
PKP4-207ENST00000457109 CYP19A1P11511 503 aaPredicted RBP11.81□□□□□ -0.52
PKP4-207ENST00000457109 CANXP27824 592 aaKnown RBP11.81□□□□□ -0.52
PKP4-207ENST00000457109 NARFQ9UHQ1 456 aa11.81□□□□□ -0.52
PKP4-207ENST00000457109 NPHP1O15259 732 aa11.8□□□□□ -0.52
PKP4-207ENST00000457109 NEFMP07197 916 aa11.8□□□□□ -0.52
PKP4-207ENST00000457109 TM4SF1P30408 202 aa11.8□□□□□ -0.52
PKP4-207ENST00000457109 RTF1Q92541 710 aaKnown RBP11.8□□□□□ -0.52
PKP4-207ENST00000457109 ZNF330Q9Y3S2 320 aaPredicted RBP11.8□□□□□ -0.52
PKP4-207ENST00000457109 TAF1LQ8IZX4 1826 aa11.8□□□□□ -0.52
PKP4-207ENST00000457109 PXDNLA1KZ92 1463 aa11.79□□□□□ -0.52
PKP4-207ENST00000457109 HSPA6P17066 643 aa11.79□□□□□ -0.52
PKP4-207ENST00000457109 C9orf131Q5VYM1 1079 aa11.79□□□□□ -0.52
PKP4-207ENST00000457109 SOS1Q07889 1333 aaPredicted RBP11.79□□□□□ -0.52
PKP4-207ENST00000457109 NPC1L1Q9UHC9 1359 aa11.79□□□□□ -0.52
PKP4-207ENST00000457109 H0YIN7 160 aa11.78□□□□□ -0.52
PKP4-207ENST00000457109 POLRMTO00411 1230 aaKnown RBP11.78□□□□□ -0.52
PKP4-207ENST00000457109 TOMM70O94826 608 aa11.78□□□□□ -0.52
PKP4-207ENST00000457109 SERPINB2P05120 415 aa11.78□□□□□ -0.52
PKP4-207ENST00000457109 CHRNA5P30532 468 aa11.78□□□□□ -0.52
PKP4-207ENST00000457109 DDR1Q08345 913 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 921.9 ms