RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 RBM27Q9P2N5 1060 aaKnown RBP5.83□□□□□ -1.48
PCDH9-203ENST00000456367 CKAP4Q07065 602 aaKnown RBP5.83□□□□□ -1.48
PCDH9-203ENST00000456367 DAPK1P53355 1430 aa5.83□□□□□ -1.48
PCDH9-203ENST00000456367 OPA1O60313 960 aa5.83□□□□□ -1.48
PCDH9-203ENST00000456367 SURF6O75683 361 aaKnown RBP5.83□□□□□ -1.48
PCDH9-203ENST00000456367 CDKL5O76039 1030 aa5.83□□□□□ -1.48
PCDH9-203ENST00000456367 TXLNAP40222 546 aa5.83□□□□□ -1.48
PCDH9-203ENST00000456367 ODF2Q5BJF6 829 aa5.83□□□□□ -1.48
PCDH9-203ENST00000456367 FSD1Q9BTV5 496 aa5.83□□□□□ -1.48
PCDH9-203ENST00000456367 TTC12Q9H892 705 aaPredicted RBP5.83□□□□□ -1.48
PCDH9-203ENST00000456367 ERICH2A1L162 156 aa5.83□□□□□ -1.48
PCDH9-203ENST00000456367 ATP8B1O43520 1251 aa5.83□□□□□ -1.48
PCDH9-203ENST00000456367 GBP2P32456 591 aaPredicted RBP5.83□□□□□ -1.48
PCDH9-203ENST00000456367 HSPA4P34932 840 aa5.83□□□□□ -1.48
PCDH9-203ENST00000456367 GIGYF2Q6Y7W6 1299 aaKnown RBP5.83□□□□□ -1.48
PCDH9-203ENST00000456367 C10orf67Q8IYJ2 551 aa5.83□□□□□ -1.48
PCDH9-203ENST00000456367 FAM177A1Q8N128 213 aaPredicted RBP5.83□□□□□ -1.48
PCDH9-203ENST00000456367 PAIP2Q9BPZ3 127 aaKnown RBP5.83□□□□□ -1.48
PCDH9-203ENST00000456367 RBSNQ9H1K0 784 aa5.83□□□□□ -1.48
PCDH9-203ENST00000456367 ZSCAN16Q9H4T2 348 aaPredicted RBP5.83□□□□□ -1.48
PCDH9-203ENST00000456367 NCAPD3P42695 1498 aa5.82□□□□□ -1.48
PCDH9-203ENST00000456367 RIOK3O14730 519 aaKnown RBP5.82□□□□□ -1.48
PCDH9-203ENST00000456367 KIF3BO15066 747 aa5.82□□□□□ -1.48
PCDH9-203ENST00000456367 FCHSD2O94868 740 aa5.82□□□□□ -1.48
PCDH9-203ENST00000456367 RSPH14Q9UHP6 348 aa5.82□□□□□ -1.48
PCDH9-203ENST00000456367 TDRD9Q8NDG6 1382 aaKnown RBP5.82□□□□□ -1.48
PCDH9-203ENST00000456367 PIP4K2BP78356 416 aa5.82□□□□□ -1.48
PCDH9-203ENST00000456367 B4GALNT4Q76KP1 1039 aa5.82□□□□□ -1.48
PCDH9-203ENST00000456367 HDXQ7Z353 690 aa5.82□□□□□ -1.48
PCDH9-203ENST00000456367 SKAP1Q86WV1 359 aa5.82□□□□□ -1.48
PCDH9-203ENST00000456367 LIG1P18858 919 aa5.82□□□□□ -1.48
PCDH9-203ENST00000456367 RNF187Q5TA31 235 aaPredicted RBP5.82□□□□□ -1.48
PCDH9-203ENST00000456367 TTC22Q5TAA0 569 aa5.82□□□□□ -1.48
PCDH9-203ENST00000456367 SPECC1LQ69YQ0 1117 aa5.82□□□□□ -1.48
PCDH9-203ENST00000456367 PLCD3Q8N3E9 789 aa5.82□□□□□ -1.48
PCDH9-203ENST00000456367 MICALL1Q8N3F8 863 aa5.82□□□□□ -1.48
PCDH9-203ENST00000456367 JAKMIP1Q96N16 626 aaKnown RBP5.82□□□□□ -1.48
PCDH9-203ENST00000456367 NAA15Q9BXJ9 866 aaKnown RBP5.82□□□□□ -1.48
PCDH9-203ENST00000456367 TRMT1Q9NXH9 659 aaKnown RBP5.82□□□□□ -1.48
PCDH9-203ENST00000456367 TSPYL4Q9UJ04 414 aa5.82□□□□□ -1.48
PCDH9-203ENST00000456367 CCDC141Q6ZP82 1450 aa5.82□□□□□ -1.48
PCDH9-203ENST00000456367 PAFAH1B1P43034 410 aa5.82□□□□□ -1.48
PCDH9-203ENST00000456367 AMPHP49418 695 aa5.82□□□□□ -1.48
PCDH9-203ENST00000456367 SARNPP82979 210 aaKnown RBP5.82□□□□□ -1.48
PCDH9-203ENST00000456367 KRBA2Q6ZNG9 492 aa5.82□□□□□ -1.48
PCDH9-203ENST00000456367 FMNL3Q8IVF7 1028 aa5.82□□□□□ -1.48
PCDH9-203ENST00000456367 TMX3Q96JJ7 454 aa5.82□□□□□ -1.48
PCDH9-203ENST00000456367 BCL2L12Q9HB09 334 aa5.82□□□□□ -1.48
PCDH9-203ENST00000456367 NEFHP12036 1026 aa5.81□□□□□ -1.48
PCDH9-203ENST00000456367 NFXL1Q6ZNB6 911 aa5.81□□□□□ -1.48
PCDH9-203ENST00000456367 TSR2Q969E8 191 aaKnown RBP5.81□□□□□ -1.48
PCDH9-203ENST00000456367 TOMM22Q9NS69 142 aa5.81□□□□□ -1.48
PCDH9-203ENST00000456367 CPSF2Q9P2I0 782 aaKnown RBP5.81□□□□□ -1.48
PCDH9-203ENST00000456367 HECW1Q76N89 1606 aa5.81□□□□□ -1.48
PCDH9-203ENST00000456367 ELP1O95163 1332 aa5.81□□□□□ -1.48
PCDH9-203ENST00000456367 U2AF2P26368 475 aaKnown RBP eCLIP5.81□□□□□ -1.48
PCDH9-203ENST00000456367 ATP6V1AP38606 617 aa5.81□□□□□ -1.48
PCDH9-203ENST00000456367 DNAJC21Q5F1R6 531 aaKnown RBP5.81□□□□□ -1.48
PCDH9-203ENST00000456367 STK11IPQ8N1F8 1099 aa5.81□□□□□ -1.48
PCDH9-203ENST00000456367 ARFGAP2Q8N6H7 521 aa5.81□□□□□ -1.48
PCDH9-203ENST00000456367 RSRC1Q96IZ7 334 aaKnown RBP5.81□□□□□ -1.48
PCDH9-203ENST00000456367 RALGAPBQ86X10 1494 aa5.81□□□□□ -1.48
PCDH9-203ENST00000456367 CTAGE15A4D2H0 777 aa5.81□□□□□ -1.48
PCDH9-203ENST00000456367 MARCH6O60337 910 aa5.81□□□□□ -1.48
PCDH9-203ENST00000456367 GLRX3O76003 335 aaKnown RBP5.81□□□□□ -1.48
PCDH9-203ENST00000456367 CTAGE8P0CG41 777 aa5.81□□□□□ -1.48
PCDH9-203ENST00000456367 GNG11P61952 73 aa5.81□□□□□ -1.48
PCDH9-203ENST00000456367 SKIDA1Q1XH10 827 aa5.81□□□□□ -1.48
PCDH9-203ENST00000456367 CTAGE6Q86UF2 777 aa5.81□□□□□ -1.48
PCDH9-203ENST00000456367 USP48Q86UV5 1035 aa5.81□□□□□ -1.48
PCDH9-203ENST00000456367 CTAGE4Q8IX94 777 aa5.81□□□□□ -1.48
PCDH9-203ENST00000456367 OTUD6BQ8N6M0 293 aa5.81□□□□□ -1.48
PCDH9-203ENST00000456367 SSH1Q8WYL5 1049 aa5.81□□□□□ -1.48
PCDH9-203ENST00000456367 NSD2O96028 1365 aa5.81□□□□□ -1.48
PCDH9-203ENST00000456367 TMPOP42166 694 aaKnown RBP5.81□□□□□ -1.48
PCDH9-203ENST00000456367 EIF5P55010 431 aaKnown RBP5.81□□□□□ -1.48
PCDH9-203ENST00000456367 SART3Q15020 963 aaKnown RBP5.81□□□□□ -1.48
PCDH9-203ENST00000456367 CAMK4Q16566 473 aa5.81□□□□□ -1.48
PCDH9-203ENST00000456367 TMC6Q7Z403 805 aa5.81□□□□□ -1.48
PCDH9-203ENST00000456367 WASF1Q92558 559 aa5.81□□□□□ -1.48
PCDH9-203ENST00000456367 C1orf115Q9H7X2 142 aa5.81□□□□□ -1.48
PCDH9-203ENST00000456367 CEP131Q9UPN4 1083 aa5.81□□□□□ -1.48
PCDH9-203ENST00000456367 NPHP3Q7Z494 1330 aa5.8□□□□□ -1.48
PCDH9-203ENST00000456367 CASTP20810 708 aaKnown RBP5.8□□□□□ -1.48
PCDH9-203ENST00000456367 MAP2K2P36507 400 aa5.8□□□□□ -1.48
PCDH9-203ENST00000456367 ANKRD18AQ8IVF6 992 aa5.8□□□□□ -1.48
PCDH9-203ENST00000456367 GAS2L2Q8NHY3 880 aa5.8□□□□□ -1.48
PCDH9-203ENST00000456367 ZNF830Q96NB3 372 aaPredicted RBP5.8□□□□□ -1.48
PCDH9-203ENST00000456367 USO1O60763 962 aaKnown RBP5.8□□□□□ -1.48
PCDH9-203ENST00000456367 CCDC175P0C221 793 aa5.8□□□□□ -1.48
PCDH9-203ENST00000456367 TEFQ10587 303 aa5.8□□□□□ -1.48
PCDH9-203ENST00000456367 SPATS2Q86XZ4 545 aaKnown RBP5.8□□□□□ -1.48
PCDH9-203ENST00000456367 TAF4BQ92750 862 aa5.8□□□□□ -1.48
PCDH9-203ENST00000456367 CTNNA3Q9UI47 895 aa5.8□□□□□ -1.48
PCDH9-203ENST00000456367 TRIM27P14373 513 aa5.8□□□□□ -1.48
PCDH9-203ENST00000456367 NUTM1Q86Y26 1132 aa5.8□□□□□ -1.48
PCDH9-203ENST00000456367 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.8□□□□□ -1.48
PCDH9-203ENST00000456367 IMPACTQ9P2X3 320 aa5.8□□□□□ -1.48
PCDH9-203ENST00000456367 DNAI1Q9UI46 699 aa5.8□□□□□ -1.48
PCDH9-203ENST00000456367 HSF2BPO75031 334 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms