RNA–Protein interactions for RNA: ENST00000454568.1

RFC3P1-201, Transcript of replication factor C 3 pseudogene 1, humanhuman

BASIC

Gene RFC3P1, Length 682 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P1-201ENST00000454568 SAFB2Q14151 953 aaKnown RBP eCLIP12.44□□□□□ -0.42
RFC3P1-201ENST00000454568 POGKQ9P215 609 aa12.44□□□□□ -0.42
RFC3P1-201ENST00000454568 TECPR2O15040 1411 aa12.44□□□□□ -0.42
RFC3P1-201ENST00000454568 PLEKHH1Q9ULM0 1364 aa12.43□□□□□ -0.42
RFC3P1-201ENST00000454568 NPHP3Q7Z494 1330 aa12.43□□□□□ -0.42
RFC3P1-201ENST00000454568 MYOM2P54296 1465 aa12.43□□□□□ -0.42
RFC3P1-201ENST00000454568 FOXO3O43524 673 aa12.43□□□□□ -0.42
RFC3P1-201ENST00000454568 ADAMTS2O95450 1211 aa12.43□□□□□ -0.42
RFC3P1-201ENST00000454568 MYT1Q01538 1121 aa12.43□□□□□ -0.42
RFC3P1-201ENST00000454568 EMID1Q96A84 441 aaPredicted RBP12.43□□□□□ -0.42
RFC3P1-201ENST00000454568 ZNF775Q96BV0 537 aaPredicted RBP12.43□□□□□ -0.42
RFC3P1-201ENST00000454568 C8orf37Q96NL8 207 aa12.43□□□□□ -0.42
RFC3P1-201ENST00000454568 SLC6A16Q9GZN6 736 aa12.43□□□□□ -0.42
RFC3P1-201ENST00000454568 CDC42BPGQ6DT37 1551 aa12.43□□□□□ -0.42
RFC3P1-201ENST00000454568 PNPLA6Q8IY17 1366 aa12.43□□□□□ -0.42
RFC3P1-201ENST00000454568 KNDC1Q76NI1 1749 aa12.42□□□□□ -0.42
RFC3P1-201ENST00000454568 SOS2Q07890 1332 aaPredicted RBP12.42□□□□□ -0.42
RFC3P1-201ENST00000454568 LAMC1P11047 1609 aa12.42□□□□□ -0.42
RFC3P1-201ENST00000454568 SIRT1Q96EB6 747 aa12.42□□□□□ -0.42
RFC3P1-201ENST00000454568 NGLY1Q96IV0 654 aa12.42□□□□□ -0.42
RFC3P1-201ENST00000454568 PRAM1Q96QH2 718 aa12.42□□□□□ -0.42
RFC3P1-201ENST00000454568 AFF2P51816 1311 aa12.41□□□□□ -0.42
RFC3P1-201ENST00000454568 PPEF1O14829 653 aaPredicted RBP12.41□□□□□ -0.42
RFC3P1-201ENST00000454568 XPCQ01831 940 aaPredicted RBP12.41□□□□□ -0.42
RFC3P1-201ENST00000454568 LIAT1Q6ZQX7 453 aa12.41□□□□□ -0.42
RFC3P1-201ENST00000454568 TRAK1Q9UPV9 953 aa12.41□□□□□ -0.42
RFC3P1-201ENST00000454568 NRXN1Q9ULB1 1477 aa12.4□□□□□ -0.42
RFC3P1-201ENST00000454568 RXRBP28702 533 aa12.4□□□□□ -0.42
RFC3P1-201ENST00000454568 SLC10A3P09131 477 aa12.39□□□□□ -0.43
RFC3P1-201ENST00000454568 TSHZ2Q9NRE2 1034 aa12.39□□□□□ -0.43
RFC3P1-201ENST00000454568 FAM187AA6NFU0 413 aa12.38□□□□□ -0.43
RFC3P1-201ENST00000454568 LMOD2Q6P5Q4 547 aa12.38□□□□□ -0.43
RFC3P1-201ENST00000454568 QTRT2Q9H974 415 aaKnown RBP12.38□□□□□ -0.43
RFC3P1-201ENST00000454568 FMN2Q9NZ56 1722 aa12.37□□□□□ -0.43
RFC3P1-201ENST00000454568 GDF9O60383 454 aa12.37□□□□□ -0.43
RFC3P1-201ENST00000454568 FAM161AQ3B820 660 aa12.37□□□□□ -0.43
RFC3P1-201ENST00000454568 KRT28Q7Z3Y7 464 aa12.37□□□□□ -0.43
RFC3P1-201ENST00000454568 SCUBE3Q8IX30 993 aa12.37□□□□□ -0.43
RFC3P1-201ENST00000454568 PXYLP1Q8TE99 480 aa12.37□□□□□ -0.43
RFC3P1-201ENST00000454568 HAP1P54257 671 aaPredicted RBP12.36□□□□□ -0.43
RFC3P1-201ENST00000454568 PSME1Q06323 249 aa12.36□□□□□ -0.43
RFC3P1-201ENST00000454568 HIRIP3Q9BW71 556 aaPredicted RBP12.36□□□□□ -0.43
RFC3P1-201ENST00000454568 USP21Q9UK80 565 aa12.36□□□□□ -0.43
RFC3P1-201ENST00000454568 MINK1Q8N4C8 1332 aaPredicted RBP12.36□□□□□ -0.43
RFC3P1-201ENST00000454568 HIC1Q14526 733 aa12.35□□□□□ -0.43
RFC3P1-201ENST00000454568 RGPD8O14715 1765 aaPredicted RBP12.35□□□□□ -0.43
RFC3P1-201ENST00000454568 DLC1Q96QB1 1528 aa12.34□□□□□ -0.43
RFC3P1-201ENST00000454568 TNFRSF10AO00220 468 aa12.34□□□□□ -0.43
RFC3P1-201ENST00000454568 RBM6P78332 1123 aaKnown RBP12.34□□□□□ -0.43
RFC3P1-201ENST00000454568 PMFBP1Q8TBY8 1022 aa12.34□□□□□ -0.43
RFC3P1-201ENST00000454568 SPSB2Q99619 263 aa12.34□□□□□ -0.43
RFC3P1-201ENST00000454568 KIF1AQ12756 1690 aa12.34□□□□□ -0.43
RFC3P1-201ENST00000454568 PXDNQ92626 1479 aa12.34□□□□□ -0.43
RFC3P1-201ENST00000454568 SPATA31A3Q5VYP0 1347 aa12.33□□□□□ -0.44
RFC3P1-201ENST00000454568 ADGRB1O14514 1584 aa12.32□□□□□ -0.44
RFC3P1-201ENST00000454568 TRPC5Q9UL62 973 aaPredicted RBP12.32□□□□□ -0.44
RFC3P1-201ENST00000454568 COL22A1Q8NFW1 1626 aaPredicted RBP12.31□□□□□ -0.44
RFC3P1-201ENST00000454568 WASLO00401 505 aaPredicted RBP12.31□□□□□ -0.44
RFC3P1-201ENST00000454568 METTL3Q86U44 580 aaKnown RBP12.31□□□□□ -0.44
RFC3P1-201ENST00000454568 EIF3AQ14152 1382 aaKnown RBP12.3□□□□□ -0.44
RFC3P1-201ENST00000454568 RPIAP49247 311 aa12.3□□□□□ -0.44
RFC3P1-201ENST00000454568 SMYD5Q6GMV2 418 aa12.3□□□□□ -0.44
RFC3P1-201ENST00000454568 FNBP4Q8N3X1 1017 aaPredicted RBP12.3□□□□□ -0.44
RFC3P1-201ENST00000454568 NGDNQ8NEJ9 315 aaKnown RBP12.3□□□□□ -0.44
RFC3P1-201ENST00000454568 ANKARQ7Z5J8 1434 aa12.29□□□□□ -0.44
RFC3P1-201ENST00000454568 SEMA3EO15041 775 aa12.29□□□□□ -0.44
RFC3P1-201ENST00000454568 NEUROD1Q13562 356 aa12.29□□□□□ -0.44
RFC3P1-201ENST00000454568 GPRASP1Q5JY77 1395 aa12.29□□□□□ -0.44
RFC3P1-201ENST00000454568 CDK12Q9NYV4 1490 aaPredicted RBP12.28□□□□□ -0.44
RFC3P1-201ENST00000454568 PUS10Q3MIT2 529 aaKnown RBP12.28□□□□□ -0.44
RFC3P1-201ENST00000454568 PLA2G2CQ5R387 149 aa12.28□□□□□ -0.44
RFC3P1-201ENST00000454568 CABLES1Q8TDN4 633 aa12.28□□□□□ -0.44
RFC3P1-201ENST00000454568 SIN3AQ96ST3 1273 aa12.28□□□□□ -0.44
RFC3P1-201ENST00000454568 TNS3Q68CZ2 1445 aa12.28□□□□□ -0.44
RFC3P1-201ENST00000454568 ADGRB2O60241 1585 aa12.27□□□□□ -0.44
RFC3P1-201ENST00000454568 CD2BP2O95400 341 aaKnown RBP12.27□□□□□ -0.45
RFC3P1-201ENST00000454568 NBPF1Q3BBV0 1214 aa12.27□□□□□ -0.45
RFC3P1-201ENST00000454568 DAXXQ9UER7 740 aaPredicted RBP12.27□□□□□ -0.45
RFC3P1-201ENST00000454568 MARF1Q9Y4F3 1742 aaKnown RBP12.27□□□□□ -0.45
RFC3P1-201ENST00000454568 USP32Q8NFA0 1604 aa12.26□□□□□ -0.45
RFC3P1-201ENST00000454568 ARHGEF28Q8N1W1 1705 aaKnown RBP12.26□□□□□ -0.45
RFC3P1-201ENST00000454568 RDH13Q8NBN7 331 aa12.26□□□□□ -0.45
RFC3P1-201ENST00000454568 NUDT16Q96DE0 195 aaKnown RBP12.26□□□□□ -0.45
RFC3P1-201ENST00000454568 CDK19Q9BWU1 502 aa12.26□□□□□ -0.45
RFC3P1-201ENST00000454568 AAASQ9NRG9 546 aa12.26□□□□□ -0.45
RFC3P1-201ENST00000454568 PRR36Q9H6K5 1346 aa12.26□□□□□ -0.45
RFC3P1-201ENST00000454568 SBNO1A3KN83 1393 aa12.26□□□□□ -0.45
RFC3P1-201ENST00000454568 ARHGEF10O15013 1369 aa12.26□□□□□ -0.45
RFC3P1-201ENST00000454568 TULP4Q9NRJ4 1543 aa12.26□□□□□ -0.45
RFC3P1-201ENST00000454568 FOXC1Q12948 553 aa12.25□□□□□ -0.45
RFC3P1-201ENST00000454568 L3MBTL2Q969R5 705 aa12.25□□□□□ -0.45
RFC3P1-201ENST00000454568 CCDC9Q9Y3X0 531 aaKnown RBP12.25□□□□□ -0.45
RFC3P1-201ENST00000454568 RGS12O14924 1447 aa12.25□□□□□ -0.45
RFC3P1-201ENST00000454568 KIAA1210Q9ULL0 1709 aa12.25□□□□□ -0.45
RFC3P1-201ENST00000454568 ATP6V1AP38606 617 aa12.24□□□□□ -0.45
RFC3P1-201ENST00000454568 UNC5CLQ8IV45 518 aa12.24□□□□□ -0.45
RFC3P1-201ENST00000454568 SULF1Q8IWU6 871 aa12.24□□□□□ -0.45
RFC3P1-201ENST00000454568 CRIPAKQ8N1N5 446 aa12.24□□□□□ -0.45
RFC3P1-201ENST00000454568 GJD4Q96KN9 370 aaPredicted RBP12.24□□□□□ -0.45
RFC3P1-201ENST00000454568 BCL9LQ86UU0 1499 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms