RNA–Protein interactions for RNA: ENST00000453396.5

SMIM27-204, Transcript of small integral membrane protein 27, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SMIM27, Length 1,003 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27-204ENST00000453396 ITPK1Q13572 414 aa23.28■■□□□ 1.32
SMIM27-204ENST00000453396 AMER1Q5JTC6 1135 aaPredicted RBP23.27■■□□□ 1.32
SMIM27-204ENST00000453396 ZNF530Q6P9A1 599 aaPredicted RBP23.27■■□□□ 1.32
SMIM27-204ENST00000453396 HSP90AB1P08238 724 aaKnown RBP23.26■■□□□ 1.31
SMIM27-204ENST00000453396 DCAF5Q96JK2 942 aa23.26■■□□□ 1.31
SMIM27-204ENST00000453396 ERVV-2B6SEH9 535 aa23.25■■□□□ 1.31
SMIM27-204ENST00000453396 AMOTQ4VCS5 1084 aa23.25■■□□□ 1.31
SMIM27-204ENST00000453396 SULT6B1Q6IMI4 303 aa23.25■■□□□ 1.31
SMIM27-204ENST00000453396 GNPATO15228 680 aa23.24■■□□□ 1.31
SMIM27-204ENST00000453396 SSFA2P28290 1259 aa23.24■■□□□ 1.31
SMIM27-204ENST00000453396 IL13P35225 146 aa23.23■■□□□ 1.31
SMIM27-204ENST00000453396 KDM6AO15550 1401 aaPredicted RBP23.23■■□□□ 1.31
SMIM27-204ENST00000453396 RBM42Q9BTD8 480 aaKnown RBP23.22■■□□□ 1.31
SMIM27-204ENST00000453396 YBX3P16989 372 aaKnown RBP eCLIP23.21■■□□□ 1.319e-6■□□□□ 10.4
SMIM27-204ENST00000453396 MTHFSP49914 203 aa23.21■■□□□ 1.31
SMIM27-204ENST00000453396 CABP4P57796 275 aa23.21■■□□□ 1.31
SMIM27-204ENST00000453396 C1orf141Q5JVX7 400 aa23.21■■□□□ 1.31
SMIM27-204ENST00000453396 SLC4A9Q96Q91 983 aa23.21■■□□□ 1.31
SMIM27-204ENST00000453396 CD2APQ9Y5K6 639 aa23.21■■□□□ 1.31
SMIM27-204ENST00000453396 KDRP35968 1356 aa23.21■■□□□ 1.31
SMIM27-204ENST00000453396 PER1O15534 1290 aaPredicted RBP23.18■■□□□ 1.3
SMIM27-204ENST00000453396 GRIN3BO60391 1043 aa23.17■■□□□ 1.3
SMIM27-204ENST00000453396 CC2D1BQ5T0F9 858 aaKnown RBP23.17■■□□□ 1.3
SMIM27-204ENST00000453396 ZNF831Q5JPB2 1677 aa23.16■■□□□ 1.3
SMIM27-204ENST00000453396 NFATC2IPQ8NCF5 419 aa23.16■■□□□ 1.3
SMIM27-204ENST00000453396 RTCBQ9Y3I0 505 aaKnown RBP23.15■■□□□ 1.3
SMIM27-204ENST00000453396 COL5A3P25940 1745 aaPredicted RBP23.14■■□□□ 1.3
SMIM27-204ENST00000453396 TRAPPC3LQ5T215 181 aa23.14■■□□□ 1.29
SMIM27-204ENST00000453396 PTCD1O75127 700 aaKnown RBP23.13■■□□□ 1.29
SMIM27-204ENST00000453396 HMOX1P09601 288 aa23.13■■□□□ 1.29
SMIM27-204ENST00000453396 SCN11AQ9UI33 1791 aa23.13■■□□□ 1.29
SMIM27-204ENST00000453396 MYH14Q7Z406 1995 aaKnown RBP23.12■■□□□ 1.29
SMIM27-204ENST00000453396 CNGB1Q14028 1251 aaPredicted RBP23.12■■□□□ 1.29
SMIM27-204ENST00000453396 RC3H1Q5TC82 1133 aaKnown RBP23.12■■□□□ 1.29
SMIM27-204ENST00000453396 CNTNAP4Q9C0A0 1308 aa23.11■■□□□ 1.29
SMIM27-204ENST00000453396 MMP10P09238 476 aa23.11■■□□□ 1.29
SMIM27-204ENST00000453396 AKAP4Q5JQC9 854 aa23.11■■□□□ 1.29
SMIM27-204ENST00000453396 ARHGEF1Q92888 912 aaKnown RBP23.11■■□□□ 1.29
SMIM27-204ENST00000453396 WWC3Q9ULE0 1092 aa23.11■■□□□ 1.29
SMIM27-204ENST00000453396 DIAPH1O60610 1272 aaKnown RBP23.09■■□□□ 1.29
SMIM27-204ENST00000453396 RPS6KA4O75676 772 aa23.09■■□□□ 1.29
SMIM27-204ENST00000453396 ADRA2BP18089 450 aa23.09■■□□□ 1.29
SMIM27-204ENST00000453396 LGR6Q9HBX8 967 aa23.08■■□□□ 1.29
SMIM27-204ENST00000453396 RFC4P35249 363 aa23.07■■□□□ 1.28
SMIM27-204ENST00000453396 NLGN1Q8N2Q7 840 aa23.07■■□□□ 1.28
SMIM27-204ENST00000453396 VIRMAQ69YN4 1812 aaKnown RBP23.07■■□□□ 1.28
SMIM27-204ENST00000453396 CRKLP46109 303 aaKnown RBP23.06■■□□□ 1.28
SMIM27-204ENST00000453396 SLC52A2Q9HAB3 445 aa23.06■■□□□ 1.28
SMIM27-204ENST00000453396 TJP1Q07157 1748 aa23.05■■□□□ 1.28
SMIM27-204ENST00000453396 GYS1P13807 737 aa23.05■■□□□ 1.28
SMIM27-204ENST00000453396 MTHFSDQ2M296 383 aaKnown RBP23.05■■□□□ 1.28
SMIM27-204ENST00000453396 C4AP0C0L4 1744 aa23.05■■□□□ 1.28
SMIM27-204ENST00000453396 CICQ96RK0 1608 aaPredicted RBP23.04■■□□□ 1.28
SMIM27-204ENST00000453396 NPC1L1Q9UHC9 1359 aa23.04■■□□□ 1.28
SMIM27-204ENST00000453396 RNMTO43148 476 aaKnown RBP23.04■■□□□ 1.28
SMIM27-204ENST00000453396 C1QTNF8P60827 252 aa23.03■■□□□ 1.28
SMIM27-204ENST00000453396 SLC39A6Q13433 755 aa23.02■■□□□ 1.28
SMIM27-204ENST00000453396 KIF13BQ9NQT8 1826 aa23.02■■□□□ 1.28
SMIM27-204ENST00000453396 COL3A1P02461 1466 aaPredicted RBP23.01■■□□□ 1.27
SMIM27-204ENST00000453396 MRC1P22897 1456 aa23.01■■□□□ 1.27
SMIM27-204ENST00000453396 GIGYF1O75420 1035 aaPredicted RBP23.01■■□□□ 1.27
SMIM27-204ENST00000453396 DNAJC10Q8IXB1 793 aa23.01■■□□□ 1.27
SMIM27-204ENST00000453396 N4BP2Q86UW6 1770 aaPredicted RBP23■■□□□ 1.27
SMIM27-204ENST00000453396 U2SURPO15042 1029 aaKnown RBP23■■□□□ 1.27
SMIM27-204ENST00000453396 SRP68Q9UHB9 627 aaKnown RBP23■■□□□ 1.27
SMIM27-204ENST00000453396 PARP3Q9Y6F1 533 aa23■■□□□ 1.27
SMIM27-204ENST00000453396 PXDNLA1KZ92 1463 aa22.99■■□□□ 1.27
SMIM27-204ENST00000453396 INTS5Q6P9B9 1019 aaKnown RBP22.99■■□□□ 1.27
SMIM27-204ENST00000453396 CCDC87Q9NVE4 849 aa22.99■■□□□ 1.27
SMIM27-204ENST00000453396 KIAA1551Q9HCM1 1747 aa22.99■■□□□ 1.27
SMIM27-204ENST00000453396 ATP10DQ9P241 1426 aa22.99■■□□□ 1.27
SMIM27-204ENST00000453396 ADAMTS7Q9UKP4 1686 aa22.98■■□□□ 1.27
SMIM27-204ENST00000453396 TGFB2P61812 414 aa22.98■■□□□ 1.27
SMIM27-204ENST00000453396 C10orf71Q711Q0 1435 aa22.98■■□□□ 1.27
SMIM27-204ENST00000453396 A0A0G2JLW4 131 aa22.97■■□□□ 1.27
SMIM27-204ENST00000453396 USP42Q9H9J4 1324 aaKnown RBP22.97■■□□□ 1.27
SMIM27-204ENST00000453396 FKBP8Q14318 412 aa22.96■■□□□ 1.27
SMIM27-204ENST00000453396 SENP3-EIF4A1A0A087X0R7 540 aa22.95■■□□□ 1.26
SMIM27-204ENST00000453396 KCPQ6ZWJ8 1503 aa22.95■■□□□ 1.26
SMIM27-204ENST00000453396 ADCY9O60503 1353 aa22.94■■□□□ 1.26
SMIM27-204ENST00000453396 CYP19A1P11511 503 aaPredicted RBP22.94■■□□□ 1.26
SMIM27-204ENST00000453396 DPEP1P16444 411 aa22.94■■□□□ 1.26
SMIM27-204ENST00000453396 BCS1LQ9Y276 419 aa22.94■■□□□ 1.26
SMIM27-204ENST00000453396 SOS1Q07889 1333 aaPredicted RBP22.93■■□□□ 1.26
SMIM27-204ENST00000453396 DDR1Q08345 913 aa22.92■■□□□ 1.26
SMIM27-204ENST00000453396 USPL1Q5W0Q7 1092 aa22.92■■□□□ 1.26
SMIM27-204ENST00000453396 GAS2L2Q8NHY3 880 aa22.92■■□□□ 1.26
SMIM27-204ENST00000453396 ZNF526Q8TF50 670 aaPredicted RBP22.92■■□□□ 1.26
SMIM27-204ENST00000453396 GNAT3A8MTJ3 354 aa22.91■■□□□ 1.26
SMIM27-204ENST00000453396 ZPR1O75312 459 aa22.91■■□□□ 1.26
SMIM27-204ENST00000453396 IL17REQ8NFR9 667 aa22.91■■□□□ 1.26
SMIM27-204ENST00000453396 GPBP1L1Q9HC44 474 aaPredicted RBP22.91■■□□□ 1.26
SMIM27-204ENST00000453396 ZBTB1Q9Y2K1 713 aa22.91■■□□□ 1.26
SMIM27-204ENST00000453396 TTC5Q8N0Z6 440 aa22.9■■□□□ 1.26
SMIM27-204ENST00000453396 VSIG10Q8N0Z9 540 aa22.9■■□□□ 1.26
SMIM27-204ENST00000453396 CFAP53Q96M91 514 aa22.9■■□□□ 1.26
SMIM27-204ENST00000453396 UBR2Q8IWV8 1755 aa22.9■■□□□ 1.26
SMIM27-204ENST00000453396 BRCA1P38398 1863 aaKnown RBP22.9■■□□□ 1.26
SMIM27-204ENST00000453396 TEFQ10587 303 aa22.89■■□□□ 1.25
SMIM27-204ENST00000453396 COL15A1P39059 1388 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms