RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 NBPF14Q5TI25 921 aa4.82□□□□□ -1.64
HMGB3P8-201ENST00000449709 SIX5Q8N196 739 aa4.82□□□□□ -1.64
HMGB3P8-201ENST00000449709 MRRFQ96E11 262 aaKnown RBP4.82□□□□□ -1.64
HMGB3P8-201ENST00000449709 ARHGAP9Q9BRR9 750 aa4.82□□□□□ -1.64
HMGB3P8-201ENST00000449709 NAP1L2Q9ULW6 460 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P8-201ENST00000449709 KIAA1024Q9UPX6 916 aa4.82□□□□□ -1.64
HMGB3P8-201ENST00000449709 NOD1Q9Y239 953 aa4.82□□□□□ -1.64
HMGB3P8-201ENST00000449709 NACADO15069 1562 aa4.82□□□□□ -1.64
HMGB3P8-201ENST00000449709 SIAH2O43255 324 aa4.81□□□□□ -1.64
HMGB3P8-201ENST00000449709 MARSP56192 900 aaKnown RBP4.81□□□□□ -1.64
HMGB3P8-201ENST00000449709 SH3BP2P78314 561 aa4.81□□□□□ -1.64
HMGB3P8-201ENST00000449709 NFX1Q12986 1120 aaKnown RBP4.81□□□□□ -1.64
HMGB3P8-201ENST00000449709 OCLNQ16625 522 aa4.81□□□□□ -1.64
HMGB3P8-201ENST00000449709 SH3BP5LQ7L8J4 393 aa4.81□□□□□ -1.64
HMGB3P8-201ENST00000449709 TAS1R3Q7RTX0 852 aa4.81□□□□□ -1.64
HMGB3P8-201ENST00000449709 EHBP1Q8NDI1 1231 aa4.81□□□□□ -1.64
HMGB3P8-201ENST00000449709 ZNF594Q96JF6 807 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P8-201ENST00000449709 TRIM47Q96LD4 638 aa4.81□□□□□ -1.64
HMGB3P8-201ENST00000449709 CCDC85AQ96PX6 553 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P8-201ENST00000449709 BCCIPQ9P287 314 aaKnown RBP eCLIP4.81□□□□□ -1.64
HMGB3P8-201ENST00000449709 EGFL7Q9UHF1 273 aa4.81□□□□□ -1.64
HMGB3P8-201ENST00000449709 CDK11AQ9UQ88 783 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P8-201ENST00000449709 SEC13P55735 322 aa4.8□□□□□ -1.64
HMGB3P8-201ENST00000449709 HSP90AA2PQ14568 343 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P8-201ENST00000449709 LINC01559Q495D7 138 aa4.8□□□□□ -1.64
HMGB3P8-201ENST00000449709 LCE2CQ5TA81 110 aa4.8□□□□□ -1.64
HMGB3P8-201ENST00000449709 ZBTB33Q86T24 672 aa4.8□□□□□ -1.64
HMGB3P8-201ENST00000449709 NPAS4Q8IUM7 802 aa4.8□□□□□ -1.64
HMGB3P8-201ENST00000449709 TEX2Q8IWB9 1127 aa4.8□□□□□ -1.64
HMGB3P8-201ENST00000449709 IPO9Q96P70 1041 aaKnown RBP4.8□□□□□ -1.64
HMGB3P8-201ENST00000449709 BCL2L13Q9BXK5 485 aa4.8□□□□□ -1.64
HMGB3P8-201ENST00000449709 UNC93B1Q9H1C4 597 aa4.8□□□□□ -1.64
HMGB3P8-201ENST00000449709 CXXC1Q9P0U4 656 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P8-201ENST00000449709 PEG3Q9GZU2 1588 aa4.79□□□□□ -1.64
HMGB3P8-201ENST00000449709 ANKRD33BA6NCL7 494 aa4.79□□□□□ -1.64
HMGB3P8-201ENST00000449709 PRMT3O60678 531 aa4.79□□□□□ -1.64
HMGB3P8-201ENST00000449709 GTF2IP78347 998 aa4.79□□□□□ -1.64
HMGB3P8-201ENST00000449709 SH3RF1Q7Z6J0 888 aa4.79□□□□□ -1.64
HMGB3P8-201ENST00000449709 DZIP3Q86Y13 1208 aaKnown RBP4.79□□□□□ -1.64
HMGB3P8-201ENST00000449709 BAP1Q92560 729 aa4.79□□□□□ -1.64
HMGB3P8-201ENST00000449709 CHMP4AQ9BY43 222 aa4.79□□□□□ -1.64
HMGB3P8-201ENST00000449709 SENP2Q9HC62 589 aa4.79□□□□□ -1.64
HMGB3P8-201ENST00000449709 BIN2Q9UBW5 565 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P8-201ENST00000449709 DOLKQ9UPQ8 538 aa4.79□□□□□ -1.64
HMGB3P8-201ENST00000449709 PPM1GO15355 546 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P8-201ENST00000449709 GIGYF1O75420 1035 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P8-201ENST00000449709 BMP1P13497 986 aa4.78□□□□□ -1.64
HMGB3P8-201ENST00000449709 OXLD1Q5BKU9 147 aa4.78□□□□□ -1.64
HMGB3P8-201ENST00000449709 CCDC102BQ68D86 513 aa4.78□□□□□ -1.64
HMGB3P8-201ENST00000449709 GIPC2Q8TF65 315 aa4.78□□□□□ -1.64
HMGB3P8-201ENST00000449709 PRIMPOLQ96LW4 560 aa4.78□□□□□ -1.64
HMGB3P8-201ENST00000449709 BRPF3Q9ULD4 1205 aa4.78□□□□□ -1.64
HMGB3P8-201ENST00000449709 PCDHGA11Q9Y5H2 935 aa4.78□□□□□ -1.64
HMGB3P8-201ENST00000449709 TLL2Q9Y6L7 1015 aa4.78□□□□□ -1.64
HMGB3P8-201ENST00000449709 WASF2Q9Y6W5 498 aa4.78□□□□□ -1.64
HMGB3P8-201ENST00000449709 SFI1A8K8P3 1242 aa4.77□□□□□ -1.65
HMGB3P8-201ENST00000449709 TERTO14746 1132 aaKnown RBP4.77□□□□□ -1.65
HMGB3P8-201ENST00000449709 ICMTO60725 284 aa4.77□□□□□ -1.65
HMGB3P8-201ENST00000449709 ABL1P00519 1130 aa4.77□□□□□ -1.65
HMGB3P8-201ENST00000449709 ECM1Q16610 540 aa4.77□□□□□ -1.65
HMGB3P8-201ENST00000449709 TRIM46Q7Z4K8 759 aa4.77□□□□□ -1.65
HMGB3P8-201ENST00000449709 KIFC2Q96AC6 838 aa4.77□□□□□ -1.65
HMGB3P8-201ENST00000449709 NAP1L5Q96NT1 182 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P8-201ENST00000449709 ARID4BQ4LE39 1312 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P8-201ENST00000449709 CCER2I3L3R5 266 aa4.76□□□□□ -1.65
HMGB3P8-201ENST00000449709 CAPN5O15484 640 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P8-201ENST00000449709 VAMP1P23763 118 aa4.76□□□□□ -1.65
HMGB3P8-201ENST00000449709 ZNF211Q13398 564 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P8-201ENST00000449709 ERFEQ4G0M1 354 aa4.76□□□□□ -1.65
HMGB3P8-201ENST00000449709 UTP14CQ5TAP6 766 aaKnown RBP4.76□□□□□ -1.65
HMGB3P8-201ENST00000449709 RNF20Q5VTR2 975 aa4.76□□□□□ -1.65
HMGB3P8-201ENST00000449709 ZNF511Q8NB15 262 aa4.76□□□□□ -1.65
HMGB3P8-201ENST00000449709 TPCN2Q8NHX9 752 aa4.76□□□□□ -1.65
HMGB3P8-201ENST00000449709 PDCL3Q9H2J4 239 aa4.76□□□□□ -1.65
HMGB3P8-201ENST00000449709 CUX2O14529 1486 aa4.75□□□□□ -1.65
HMGB3P8-201ENST00000449709 MAGEB6P1A0A0J9YX57 407 aa4.75□□□□□ -1.65
HMGB3P8-201ENST00000449709 ESPNB1AK53 854 aa4.75□□□□□ -1.65
HMGB3P8-201ENST00000449709 H3BRB1 525 aa4.75□□□□□ -1.65
HMGB3P8-201ENST00000449709 WIPF1O43516 503 aa4.75□□□□□ -1.65
HMGB3P8-201ENST00000449709 C21orf2O43822 256 aa4.75□□□□□ -1.65
HMGB3P8-201ENST00000449709 WEE1P30291 646 aa4.75□□□□□ -1.65
HMGB3P8-201ENST00000449709 USP4Q13107 963 aa4.75□□□□□ -1.65
HMGB3P8-201ENST00000449709 C4orf48Q5BLP8 95 aa4.75□□□□□ -1.65
HMGB3P8-201ENST00000449709 FBXO33Q7Z6M2 555 aa4.75□□□□□ -1.65
HMGB3P8-201ENST00000449709 BPHLQ86WA6 291 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P8-201ENST00000449709 GLYCTKQ8IVS8 523 aa4.75□□□□□ -1.65
HMGB3P8-201ENST00000449709 SMAP1Q8IYB5 467 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P8-201ENST00000449709 GTF3C2Q8WUA4 911 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P8-201ENST00000449709 CARD14Q9BXL6 1004 aa4.75□□□□□ -1.65
HMGB3P8-201ENST00000449709 TUT1Q9H6E5 874 aaKnown RBP4.75□□□□□ -1.65
HMGB3P8-201ENST00000449709 ANO2Q9NQ90 1003 aa4.75□□□□□ -1.65
HMGB3P8-201ENST00000449709 M0R2N6 131 aa4.74□□□□□ -1.65
HMGB3P8-201ENST00000449709 NEFMP07197 916 aa4.74□□□□□ -1.65
HMGB3P8-201ENST00000449709 HSP90B1P14625 803 aaKnown RBP4.74□□□□□ -1.65
HMGB3P8-201ENST00000449709 TCF3P15923 654 aa4.74□□□□□ -1.65
HMGB3P8-201ENST00000449709 MMP14P50281 582 aa4.74□□□□□ -1.65
HMGB3P8-201ENST00000449709 ARHGAP4P98171 946 aa4.74□□□□□ -1.65
HMGB3P8-201ENST00000449709 FKBP4Q02790 459 aaKnown RBP eCLIP4.74□□□□□ -1.65
HMGB3P8-201ENST00000449709 FTSJ3Q8IY81 847 aaKnown RBP4.74□□□□□ -1.65
HMGB3P8-201ENST00000449709 FOXJ1Q92949 421 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms