RNA–Protein interactions for RNA: ENST00000449504.5

HDLBP-222, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-222	ENST00000449504	TERF2IP	Q9NYB0	399 aa		10.24	□□□□□ -0.77
HDLBP-222	ENST00000449504	PIM2	Q9P1W9	311 aa		10.24	□□□□□ -0.77
HDLBP-222	ENST00000449504	PARP3	Q9Y6F1	533 aa		10.24	□□□□□ -0.77
HDLBP-222	ENST00000449504	CGNL1	Q0VF96	1302 aa		10.24	□□□□□ -0.77
HDLBP-222	ENST00000449504	PCDH11X	Q9BZA7	1347 aa		10.24	□□□□□ -0.77
HDLBP-222	ENST00000449504	PCDH11Y	Q9BZA8	1340 aa		10.24	□□□□□ -0.77
HDLBP-222	ENST00000449504	N4BP2	Q86UW6	1770 aa	Predicted RBP	10.24	□□□□□ -0.77
HDLBP-222	ENST00000449504	CYP27B1	O15528	508 aa		10.23	□□□□□ -0.77
HDLBP-222	ENST00000449504	KCNA3	P22001	575 aa		10.23	□□□□□ -0.77
HDLBP-222	ENST00000449504	ITPK1	Q13572	414 aa		10.23	□□□□□ -0.77
HDLBP-222	ENST00000449504	FAM161A	Q3B820	660 aa		10.23	□□□□□ -0.77
HDLBP-222	ENST00000449504	DALRD3	Q5D0E6	543 aa	Known RBP	10.23	□□□□□ -0.77
HDLBP-222	ENST00000449504	PCDH10	Q9P2E7	1040 aa		10.23	□□□□□ -0.77
HDLBP-222	ENST00000449504	MKRN1	Q9UHC7	482 aa	Known RBP	10.23	□□□□□ -0.77
HDLBP-222	ENST00000449504	MON2	Q7Z3U7	1717 aa		10.23	□□□□□ -0.77
HDLBP-222	ENST00000449504	TOGARAM1	Q9Y4F4	1720 aa		10.23	□□□□□ -0.77
HDLBP-222	ENST00000449504	CD163L1	Q9NR16	1453 aa		10.23	□□□□□ -0.77
HDLBP-222	ENST00000449504	FAM208A	Q9UK61	1670 aa	Known RBP	10.22	□□□□□ -0.77
HDLBP-222	ENST00000449504	TAF1L	Q8IZX4	1826 aa		10.22	□□□□□ -0.77
HDLBP-222	ENST00000449504	FOXN1	O15353	648 aa		10.22	□□□□□ -0.77
HDLBP-222	ENST00000449504	VEGFA	P15692	232 aa	Predicted RBP	10.22	□□□□□ -0.77
HDLBP-222	ENST00000449504	RRS1	Q15050	365 aa	Known RBP	10.22	□□□□□ -0.77
HDLBP-222	ENST00000449504	L3MBTL2	Q969R5	705 aa		10.22	□□□□□ -0.77
HDLBP-222	ENST00000449504	DCAF5	Q96JK2	942 aa		10.22	□□□□□ -0.77
HDLBP-222	ENST00000449504	RTCB	Q9Y3I0	505 aa	Known RBP	10.22	□□□□□ -0.77
HDLBP-222	ENST00000449504	ROCK2	O75116	1388 aa	Known RBP	10.22	□□□□□ -0.77
HDLBP-222	ENST00000449504	EDC4	Q6P2E9	1401 aa	Known RBP	10.22	□□□□□ -0.77
HDLBP-222	ENST00000449504	C10orf71	Q711Q0	1435 aa		10.22	□□□□□ -0.77
HDLBP-222	ENST00000449504	ASAP1	Q9ULH1	1129 aa		10.21	□□□□□ -0.77
HDLBP-222	ENST00000449504	UBR3	Q6ZT12	1888 aa		10.21	□□□□□ -0.78
HDLBP-222	ENST00000449504		A0A1W2PP64	1363 aa		10.2	□□□□□ -0.78
HDLBP-222	ENST00000449504	RGPD2	P0DJD1	1756 aa		10.2	□□□□□ -0.78
HDLBP-222	ENST00000449504	CHRNA5	P30532	468 aa		10.2	□□□□□ -0.78
HDLBP-222	ENST00000449504	RFC4	P35249	363 aa		10.2	□□□□□ -0.78
HDLBP-222	ENST00000449504	RASSF7	Q02833	373 aa		10.2	□□□□□ -0.78
HDLBP-222	ENST00000449504	ARHGEF1	Q92888	912 aa	Known RBP	10.2	□□□□□ -0.78
HDLBP-222	ENST00000449504	TMOD3	Q9NYL9	352 aa		10.2	□□□□□ -0.78
HDLBP-222	ENST00000449504	KIAA1551	Q9HCM1	1747 aa		10.19	□□□□□ -0.78
HDLBP-222	ENST00000449504	GLTPD2	A6NH11	291 aa		10.19	□□□□□ -0.78
HDLBP-222	ENST00000449504	GYS1	P13807	737 aa		10.19	□□□□□ -0.78
HDLBP-222	ENST00000449504	AIDA	Q96BJ3	306 aa		10.19	□□□□□ -0.78
HDLBP-222	ENST00000449504	PRDM10	Q9NQV6	1147 aa		10.19	□□□□□ -0.78
HDLBP-222	ENST00000449504	SMG6	Q86US8	1419 aa	Known RBP	10.18	□□□□□ -0.78
HDLBP-222	ENST00000449504	HSP90AB2P	Q58FF8	381 aa		10.18	□□□□□ -0.78
HDLBP-222	ENST00000449504	RBM42	Q9BTD8	480 aa	Known RBP	10.18	□□□□□ -0.78
HDLBP-222	ENST00000449504	PKD1L3	Q7Z443	1732 aa		10.17	□□□□□ -0.78
HDLBP-222	ENST00000449504	CTCF	P49711	727 aa	Predicted RBP	10.17	□□□□□ -0.78
HDLBP-222	ENST00000449504	ABHD8	Q96I13	439 aa		10.17	□□□□□ -0.78
HDLBP-222	ENST00000449504	ATG3	Q9NT62	314 aa		10.17	□□□□□ -0.78
HDLBP-222	ENST00000449504	TNRC6C	Q9HCJ0	1690 aa	Known RBP	10.16	□□□□□ -0.78
HDLBP-222	ENST00000449504	LMNB1	P20700	586 aa		10.16	□□□□□ -0.78
HDLBP-222	ENST00000449504	LBX1	P52954	281 aa		10.16	□□□□□ -0.78
HDLBP-222	ENST00000449504	MLLT1	Q03111	559 aa	Predicted RBP	10.16	□□□□□ -0.78
HDLBP-222	ENST00000449504	CREBZF	Q9NS37	354 aa		10.16	□□□□□ -0.78
HDLBP-222	ENST00000449504	SPG7	Q9UQ90	795 aa		10.16	□□□□□ -0.78
HDLBP-222	ENST00000449504	KIF13B	Q9NQT8	1826 aa		10.16	□□□□□ -0.78
HDLBP-222	ENST00000449504	CCDC85C	A6NKD9	419 aa		10.15	□□□□□ -0.78
HDLBP-222	ENST00000449504	RPS6KA4	O75676	772 aa		10.15	□□□□□ -0.78
HDLBP-222	ENST00000449504	NKX1-1	Q15270	411 aa	Predicted RBP	10.15	□□□□□ -0.78
HDLBP-222	ENST00000449504	GGNBP2	Q9H3C7	697 aa		10.15	□□□□□ -0.78
HDLBP-222	ENST00000449504	SRP68	Q9UHB9	627 aa	Known RBP	10.15	□□□□□ -0.78
HDLBP-222	ENST00000449504	C4A	P0C0L4	1744 aa		10.15	□□□□□ -0.78
HDLBP-222	ENST00000449504	RTL1	A6NKG5	1358 aa		10.14	□□□□□ -0.79
HDLBP-222	ENST00000449504	ZC3H4	Q9UPT8	1303 aa	Known RBP	10.14	□□□□□ -0.79
HDLBP-222	ENST00000449504	POTEC	B2RU33	542 aa		10.14	□□□□□ -0.79
HDLBP-222	ENST00000449504	DDR1	Q08345	913 aa		10.14	□□□□□ -0.79
HDLBP-222	ENST00000449504	NEUROD1	Q13562	356 aa		10.14	□□□□□ -0.79
HDLBP-222	ENST00000449504	FKBP8	Q14318	412 aa		10.14	□□□□□ -0.79
HDLBP-222	ENST00000449504	DPY19L2	Q6NUT2	758 aa		10.14	□□□□□ -0.79
HDLBP-222	ENST00000449504	SLC4A9	Q96Q91	983 aa		10.14	□□□□□ -0.79
HDLBP-222	ENST00000449504	PCNT	O95613	3336 aa		10.13	□□□□□ -0.79
HDLBP-222	ENST00000449504	ITGB4	P16144	1822 aa		10.13	□□□□□ -0.79
HDLBP-222	ENST00000449504	RC3H1	Q5TC82	1133 aa	Known RBP	10.13	□□□□□ -0.79
HDLBP-222	ENST00000449504	CHADL	Q6NUI6	762 aa		10.13	□□□□□ -0.79
HDLBP-222	ENST00000449504	SIN3A	Q96ST3	1273 aa		10.13	□□□□□ -0.79
HDLBP-222	ENST00000449504	CARD11	Q9BXL7	1154 aa		10.13	□□□□□ -0.79
HDLBP-222	ENST00000449504	INSR	P06213	1382 aa		10.13	□□□□□ -0.79
HDLBP-222	ENST00000449504	MAP2	P11137	1827 aa	Known RBP	10.12	□□□□□ -0.79
HDLBP-222	ENST00000449504	ARFGEF1	Q9Y6D6	1849 aa		10.12	□□□□□ -0.79
HDLBP-222	ENST00000449504	PPM1G	O15355	546 aa	Predicted RBP	10.12	□□□□□ -0.79
HDLBP-222	ENST00000449504	POTEI	P0CG38	1075 aa		10.12	□□□□□ -0.79
HDLBP-222	ENST00000449504	POTEJ	P0CG39	1038 aa		10.12	□□□□□ -0.79
HDLBP-222	ENST00000449504	VEGFB	P49765	207 aa		10.12	□□□□□ -0.79
HDLBP-222	ENST00000449504	IFNL2	Q8IZJ0	200 aa		10.12	□□□□□ -0.79
HDLBP-222	ENST00000449504	CFAP44	Q96MT7	982 aa		10.12	□□□□□ -0.79
HDLBP-222	ENST00000449504	CNTNAP1	P78357	1384 aa		10.12	□□□□□ -0.79
HDLBP-222	ENST00000449504	BRCA1	P38398	1863 aa	Known RBP	10.11	□□□□□ -0.79
HDLBP-222	ENST00000449504	FYB1	O15117	783 aa		10.11	□□□□□ -0.79
HDLBP-222	ENST00000449504	PHKG2	P15735	406 aa		10.11	□□□□□ -0.79
HDLBP-222	ENST00000449504	CNTNAP4	Q9C0A0	1308 aa		10.1	□□□□□ -0.79
HDLBP-222	ENST00000449504	ABCB7	O75027	752 aa		10.1	□□□□□ -0.79
HDLBP-222	ENST00000449504	TTLL6	Q8N841	843 aa		10.1	□□□□□ -0.79
HDLBP-222	ENST00000449504	WBP1L	Q9NX94	342 aa		10.1	□□□□□ -0.79
HDLBP-222	ENST00000449504	ZNF219	Q9P2Y4	722 aa	Predicted RBP	10.1	□□□□□ -0.79
HDLBP-222	ENST00000449504	FLT4	P35916	1363 aa		10.1	□□□□□ -0.79
HDLBP-222	ENST00000449504	USP42	Q9H9J4	1324 aa	Known RBP	10.09	□□□□□ -0.79
HDLBP-222	ENST00000449504	KDM6A	O15550	1401 aa	Predicted RBP	10.09	□□□□□ -0.79
HDLBP-222	ENST00000449504	NFKBIE	O00221	500 aa		10.09	□□□□□ -0.79
HDLBP-222	ENST00000449504	POLRMT	O00411	1230 aa	Known RBP	10.09	□□□□□ -0.79
HDLBP-222	ENST00000449504	PTCD1	O75127	700 aa	Known RBP	10.09	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms