RNA–Protein interactions for RNA: ENST00000449469.5

SNHG17-207, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,138 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-207ENST00000449469 SALL3Q9BXA9 1300 aa20.66■□□□□ 0.9
SNHG17-207ENST00000449469 ANKARQ7Z5J8 1434 aa20.66■□□□□ 0.9
SNHG17-207ENST00000449469 ARHGAP23Q9P227 1491 aa20.66■□□□□ 0.9
SNHG17-207ENST00000449469 XRN1Q8IZH2 1706 aaKnown RBP20.66■□□□□ 0.9
SNHG17-207ENST00000449469 KIF13AQ9H1H9 1805 aa20.66■□□□□ 0.9
SNHG17-207ENST00000449469 IL17RAQ96F46 866 aa20.65■□□□□ 0.9
SNHG17-207ENST00000449469 LRRCC1Q9C099 1032 aa20.65■□□□□ 0.9
SNHG17-207ENST00000449469 NASPP49321 788 aaPredicted RBP20.65■□□□□ 0.9
SNHG17-207ENST00000449469 TBX22Q9Y458 520 aa20.64■□□□□ 0.89
SNHG17-207ENST00000449469 PIK3C2AO00443 1686 aa20.64■□□□□ 0.89
SNHG17-207ENST00000449469 CEP170BQ9Y4F5 1589 aaPredicted RBP20.64■□□□□ 0.89
SNHG17-207ENST00000449469 AMPHP49418 695 aa20.63■□□□□ 0.89
SNHG17-207ENST00000449469 SLC4A10Q6U841 1118 aa20.63■□□□□ 0.89
SNHG17-207ENST00000449469 FLIIQ13045 1269 aa20.63■□□□□ 0.89
SNHG17-207ENST00000449469 MCTP1Q6DN14 999 aa20.63■□□□□ 0.89
SNHG17-207ENST00000449469 LMBRD1Q9NUN5 540 aa20.63■□□□□ 0.89
SNHG17-207ENST00000449469 LTKP29376 864 aa20.62■□□□□ 0.89
SNHG17-207ENST00000449469 ATP8B2P98198 1209 aa20.62■□□□□ 0.89
SNHG17-207ENST00000449469 G2E3Q7L622 706 aa20.62■□□□□ 0.89
SNHG17-207ENST00000449469 CHMP4AQ9BY43 222 aa20.62■□□□□ 0.89
SNHG17-207ENST00000449469 STAP2Q9UGK3 403 aa20.62■□□□□ 0.89
SNHG17-207ENST00000449469 GNAT3A8MTJ3 354 aa20.62■□□□□ 0.89
SNHG17-207ENST00000449469 EYA1Q99502 592 aa20.62■□□□□ 0.89
SNHG17-207ENST00000449469 APBB1O00213 710 aa20.61■□□□□ 0.89
SNHG17-207ENST00000449469 MX1P20591 662 aa20.61■□□□□ 0.89
SNHG17-207ENST00000449469 ESYT1Q9BSJ8 1104 aa20.61■□□□□ 0.89
SNHG17-207ENST00000449469 HS1BP3Q53T59 392 aa20.6■□□□□ 0.89
SNHG17-207ENST00000449469 NGDNQ8NEJ9 315 aaKnown RBP20.6■□□□□ 0.89
SNHG17-207ENST00000449469 INTS4Q96HW7 963 aaKnown RBP20.6■□□□□ 0.89
SNHG17-207ENST00000449469 MAP3K5Q99683 1374 aa20.6■□□□□ 0.89
SNHG17-207ENST00000449469 F6X3S4 739 aa20.6■□□□□ 0.89
SNHG17-207ENST00000449469 FOXO3O43524 673 aa20.6■□□□□ 0.89
SNHG17-207ENST00000449469 FKBP5Q13451 457 aaPredicted RBP20.59■□□□□ 0.89
SNHG17-207ENST00000449469 MIS18AQ9NYP9 233 aa20.59■□□□□ 0.89
SNHG17-207ENST00000449469 AMOTL2Q9Y2J4 779 aa20.59■□□□□ 0.89
SNHG17-207ENST00000449469 MBD3O95983 291 aa20.58■□□□□ 0.89
SNHG17-207ENST00000449469 CUL4AQ13619 759 aa20.58■□□□□ 0.89
SNHG17-207ENST00000449469 ZSCAN23Q3MJ62 389 aa20.58■□□□□ 0.89
SNHG17-207ENST00000449469 NWD1Q149M9 1564 aa20.57■□□□□ 0.88
SNHG17-207ENST00000449469 RAB11FIP3O75154 756 aa20.57■□□□□ 0.88
SNHG17-207ENST00000449469 PLPPR3Q6T4P5 718 aa20.56■□□□□ 0.88
SNHG17-207ENST00000449469 NAP1L5Q96NT1 182 aaPredicted RBP20.56■□□□□ 0.88
SNHG17-207ENST00000449469 EXOC6BQ9Y2D4 811 aa20.56■□□□□ 0.88
SNHG17-207ENST00000449469 AK9Q5TCS8 1911 aa20.56■□□□□ 0.88
SNHG17-207ENST00000449469 NUTM2FA1L443 756 aa20.56■□□□□ 0.88
SNHG17-207ENST00000449469 CAVIN1Q6NZI2 390 aaKnown RBP20.56■□□□□ 0.88
SNHG17-207ENST00000449469 ZGPATQ8N5A5 531 aaKnown RBP20.56■□□□□ 0.88
SNHG17-207ENST00000449469 CHMLP26374 656 aa20.55■□□□□ 0.88
SNHG17-207ENST00000449469 NEK4P51957 841 aa20.55■□□□□ 0.88
SNHG17-207ENST00000449469 TAF7Q15545 349 aaPredicted RBP20.55■□□□□ 0.88
SNHG17-207ENST00000449469 TMX3Q96JJ7 454 aa20.55■□□□□ 0.88
SNHG17-207ENST00000449469 SOX12O15370 315 aa20.54■□□□□ 0.88
SNHG17-207ENST00000449469 ZSCAN30Q86W11 494 aa20.54■□□□□ 0.88
SNHG17-207ENST00000449469 ERBB4Q15303 1308 aa20.54■□□□□ 0.88
SNHG17-207ENST00000449469 HOXB7P09629 217 aa20.54■□□□□ 0.88
SNHG17-207ENST00000449469 HOXC9P31274 260 aa20.54■□□□□ 0.88
SNHG17-207ENST00000449469 ZDHHC9Q9Y397 364 aa20.54■□□□□ 0.88
SNHG17-207ENST00000449469 MARF1Q9Y4F3 1742 aaKnown RBP20.54■□□□□ 0.88
SNHG17-207ENST00000449469 SLC26A8Q96RN1 970 aa20.53■□□□□ 0.88
SNHG17-207ENST00000449469 BRD1O95696 1058 aa20.53■□□□□ 0.88
SNHG17-207ENST00000449469 UBTFL1P0CB47 393 aaPredicted RBP20.53■□□□□ 0.88
SNHG17-207ENST00000449469 PKP1Q13835 747 aa20.53■□□□□ 0.88
SNHG17-207ENST00000449469 SSH3Q8TE77 659 aa20.53■□□□□ 0.88
SNHG17-207ENST00000449469 PNMA6EA0A0J9YXQ4 647 aa20.52■□□□□ 0.88
SNHG17-207ENST00000449469 NLRP6P59044 892 aa20.52■□□□□ 0.88
SNHG17-207ENST00000449469 RGPD8O14715 1765 aaPredicted RBP20.52■□□□□ 0.88
SNHG17-207ENST00000449469 PRPF40AO75400 957 aaKnown RBP20.51■□□□□ 0.87
SNHG17-207ENST00000449469 NCLP19338 710 aaKnown RBP20.51■□□□□ 0.87
SNHG17-207ENST00000449469 LRRFIP2Q9Y608 721 aaKnown RBP20.51■□□□□ 0.87
SNHG17-207ENST00000449469 MED1Q15648 1581 aaPredicted RBP20.51■□□□□ 0.87
SNHG17-207ENST00000449469 TRIM6-TRIM34B2RNG4 842 aa20.5■□□□□ 0.87
SNHG17-207ENST00000449469 ANO2Q9NQ90 1003 aa20.5■□□□□ 0.87
SNHG17-207ENST00000449469 LRSAM1Q6UWE0 723 aa20.5■□□□□ 0.87
SNHG17-207ENST00000449469 SYAP1Q96A49 352 aaPredicted RBP20.5■□□□□ 0.87
SNHG17-207ENST00000449469 PDLIM2Q96JY6 352 aa20.5■□□□□ 0.87
SNHG17-207ENST00000449469 USP44Q9H0E7 712 aa20.5■□□□□ 0.87
SNHG17-207ENST00000449469 CEMIPQ8WUJ3 1361 aa20.49■□□□□ 0.87
SNHG17-207ENST00000449469 THEMISQ8N1K5 641 aaPredicted RBP20.49■□□□□ 0.87
SNHG17-207ENST00000449469 GPT2Q8TD30 523 aa20.49■□□□□ 0.87
SNHG17-207ENST00000449469 POLA2Q14181 598 aa20.48■□□□□ 0.87
SNHG17-207ENST00000449469 HSP90AB4PQ58FF6 505 aa20.48■□□□□ 0.87
SNHG17-207ENST00000449469 IL17REQ8NFR9 667 aa20.48■□□□□ 0.87
SNHG17-207ENST00000449469 RILPL2Q969X0 211 aa20.48■□□□□ 0.87
SNHG17-207ENST00000449469 TPM2P07951 284 aa20.48■□□□□ 0.87
SNHG17-207ENST00000449469 MSNP26038 577 aaKnown RBP20.48■□□□□ 0.87
SNHG17-207ENST00000449469 HDGFL1Q5TGJ6 251 aa20.48■□□□□ 0.87
SNHG17-207ENST00000449469 KLHL34Q8N239 644 aa20.47■□□□□ 0.87
SNHG17-207ENST00000449469 ADGRL3Q9HAR2 1447 aa20.47■□□□□ 0.87
SNHG17-207ENST00000449469 PHF14O94880 888 aa20.46■□□□□ 0.87
SNHG17-207ENST00000449469 HSPA4P34932 840 aa20.46■□□□□ 0.87
SNHG17-207ENST00000449469 KIF1BPQ96EK5 621 aa20.46■□□□□ 0.87
SNHG17-207ENST00000449469 MCM5P33992 734 aa20.45■□□□□ 0.86
SNHG17-207ENST00000449469 WDR33Q9C0J8 1336 aaKnown RBP20.45■□□□□ 0.86
SNHG17-207ENST00000449469 PLEKHG5O94827 1062 aa20.45■□□□□ 0.86
SNHG17-207ENST00000449469 TERF1P54274 439 aa20.45■□□□□ 0.86
SNHG17-207ENST00000449469 KDM3BQ7LBC6 1761 aa20.45■□□□□ 0.86
SNHG17-207ENST00000449469 CRYBG1Q9Y4K1 1723 aa20.44■□□□□ 0.86
SNHG17-207ENST00000449469 PRIM1P49642 420 aaKnown RBP20.44■□□□□ 0.86
SNHG17-207ENST00000449469 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.44■□□□□ 0.86
SNHG17-207ENST00000449469 RBSNQ9H1K0 784 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms