RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 SBF2Q86WG5 1849 aa17.7■□□□□ 0.42
SNHG4-201ENST00000448190 KAT6BQ8WYB5 2073 aa17.7■□□□□ 0.42
SNHG4-201ENST00000448190 LOC102724428A0A0B4J2F2 783 aa17.7■□□□□ 0.42
SNHG4-201ENST00000448190 SIK1P57059 783 aa17.7■□□□□ 0.42
SNHG4-201ENST00000448190 NFE2L2Q16236 605 aa17.7■□□□□ 0.42
SNHG4-201ENST00000448190 SLC15A2Q16348 729 aa17.7■□□□□ 0.42
SNHG4-201ENST00000448190 ZNF827Q17R98 1081 aa17.7■□□□□ 0.42
SNHG4-201ENST00000448190 PDGFDQ9GZP0 370 aaPredicted RBP17.7■□□□□ 0.42
SNHG4-201ENST00000448190 NHSQ6T4R5 1651 aa17.7■□□□□ 0.42
SNHG4-201ENST00000448190 ATP6V1AP38606 617 aa17.69■□□□□ 0.42
SNHG4-201ENST00000448190 TEFQ10587 303 aa17.69■□□□□ 0.42
SNHG4-201ENST00000448190 SLC4A9Q96Q91 983 aa17.69■□□□□ 0.42
SNHG4-201ENST00000448190 RIPK4P57078 832 aa17.68■□□□□ 0.42
SNHG4-201ENST00000448190 ITPK1Q13572 414 aa17.68■□□□□ 0.42
SNHG4-201ENST00000448190 SMIM5Q71RC9 77 aa17.68■□□□□ 0.42
SNHG4-201ENST00000448190 THUMPD2Q9BTF0 503 aaKnown RBP17.68■□□□□ 0.42
SNHG4-201ENST00000448190 DOT1LQ8TEK3 1739 aa17.67■□□□□ 0.42
SNHG4-201ENST00000448190 RUNDC1Q96C34 613 aa17.67■□□□□ 0.42
SNHG4-201ENST00000448190 MIS18AQ9NYP9 233 aa17.67■□□□□ 0.42
SNHG4-201ENST00000448190 TFCP2L1Q9NZI6 479 aa17.67■□□□□ 0.42
SNHG4-201ENST00000448190 KCNQ3O43525 872 aa17.66■□□□□ 0.42
SNHG4-201ENST00000448190 TMPOP42166 694 aaKnown RBP17.66■□□□□ 0.42
SNHG4-201ENST00000448190 LINC00116Q8NCU8 138 aa17.66■□□□□ 0.42
SNHG4-201ENST00000448190 PNISRQ8TF01 805 aaKnown RBP17.66■□□□□ 0.42
SNHG4-201ENST00000448190 AKT1S1Q96B36 256 aa17.66■□□□□ 0.42
SNHG4-201ENST00000448190 TOGARAM1Q9Y4F4 1720 aa17.65■□□□□ 0.42
SNHG4-201ENST00000448190 BTAF1O14981 1849 aa17.65■□□□□ 0.42
SNHG4-201ENST00000448190 BTBD11A6QL63 1104 aa17.64■□□□□ 0.41
SNHG4-201ENST00000448190 HTATSF1O43719 755 aaKnown RBP17.64■□□□□ 0.41
SNHG4-201ENST00000448190 APAF1O14727 1248 aa17.63■□□□□ 0.41
SNHG4-201ENST00000448190 MSH5O43196 834 aa17.63■□□□□ 0.41
SNHG4-201ENST00000448190 ZBTB7AO95365 584 aa17.62■□□□□ 0.41
SNHG4-201ENST00000448190 DIEXFQ68CQ4 756 aaKnown RBP17.62■□□□□ 0.41
SNHG4-201ENST00000448190 FAM9BQ8IZU0 186 aa17.62■□□□□ 0.41
SNHG4-201ENST00000448190 TTC5Q8N0Z6 440 aa17.62■□□□□ 0.41
SNHG4-201ENST00000448190 ATF5Q9Y2D1 282 aaPredicted RBP17.62■□□□□ 0.41
SNHG4-201ENST00000448190 TAF7Q15545 349 aaPredicted RBP17.61■□□□□ 0.41
SNHG4-201ENST00000448190 ZNF790Q6PG37 636 aa17.61■□□□□ 0.41
SNHG4-201ENST00000448190 AMIGO3Q86WK7 504 aa17.61■□□□□ 0.41
SNHG4-201ENST00000448190 DNAJC10Q8IXB1 793 aa17.61■□□□□ 0.41
SNHG4-201ENST00000448190 AK7Q96M32 723 aa17.61■□□□□ 0.41
SNHG4-201ENST00000448190 CEMIPQ8WUJ3 1361 aa17.61■□□□□ 0.41
SNHG4-201ENST00000448190 PHF14O94880 888 aa17.6■□□□□ 0.41
SNHG4-201ENST00000448190 ZNF496Q96IT1 587 aaPredicted RBP17.6■□□□□ 0.41
SNHG4-201ENST00000448190 COL23A1Q86Y22 540 aaPredicted RBP17.59■□□□□ 0.41
SNHG4-201ENST00000448190 TRIM35Q9UPQ4 493 aa17.59■□□□□ 0.41
SNHG4-201ENST00000448190 PNPLA7Q6ZV29 1317 aa17.58■□□□□ 0.4
SNHG4-201ENST00000448190 GNPATO15228 680 aa17.58■□□□□ 0.4
SNHG4-201ENST00000448190 SALL2Q9Y467 1007 aaPredicted RBP17.57■□□□□ 0.4
SNHG4-201ENST00000448190 LAS1LQ9Y4W2 734 aaKnown RBP17.57■□□□□ 0.4
SNHG4-201ENST00000448190 NUP188Q5SRE5 1749 aa17.57■□□□□ 0.4
SNHG4-201ENST00000448190 RREB1Q92766 1687 aa17.57■□□□□ 0.4
SNHG4-201ENST00000448190 MIER1Q8N108 512 aa17.56■□□□□ 0.4
SNHG4-201ENST00000448190 ITGB4P16144 1822 aa17.56■□□□□ 0.4
SNHG4-201ENST00000448190 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.55■□□□□ 0.4
SNHG4-201ENST00000448190 PRAMEF22A3QJZ6 481 aa17.55■□□□□ 0.4
SNHG4-201ENST00000448190 CRKLP46109 303 aaKnown RBP17.55■□□□□ 0.4
SNHG4-201ENST00000448190 LMOD3Q0VAK6 560 aa17.55■□□□□ 0.4
SNHG4-201ENST00000448190 FMNL2Q96PY5 1086 aa17.55■□□□□ 0.4
SNHG4-201ENST00000448190 CYP19A1P11511 503 aaPredicted RBP17.54■□□□□ 0.4
SNHG4-201ENST00000448190 INTS5Q6P9B9 1019 aaKnown RBP17.54■□□□□ 0.4
SNHG4-201ENST00000448190 SPON1Q9HCB6 807 aa17.54■□□□□ 0.4
SNHG4-201ENST00000448190 MRC1P22897 1456 aa17.53■□□□□ 0.4
SNHG4-201ENST00000448190 HMGB2P26583 209 aaKnown RBP17.53■□□□□ 0.4
SNHG4-201ENST00000448190 RC3H1Q5TC82 1133 aaKnown RBP17.53■□□□□ 0.4
SNHG4-201ENST00000448190 MSL1Q68DK7 614 aa17.53■□□□□ 0.4
SNHG4-201ENST00000448190 TSPYL4Q9UJ04 414 aa17.53■□□□□ 0.4
SNHG4-201ENST00000448190 RTCBQ9Y3I0 505 aaKnown RBP17.53■□□□□ 0.4
SNHG4-201ENST00000448190 RPS6KA4O75676 772 aa17.52■□□□□ 0.4
SNHG4-201ENST00000448190 CANXP27824 592 aaKnown RBP17.52■□□□□ 0.4
SNHG4-201ENST00000448190 TRAPPC3LQ5T215 181 aa17.52■□□□□ 0.4
SNHG4-201ENST00000448190 VSIG10Q8N0Z9 540 aa17.52■□□□□ 0.4
SNHG4-201ENST00000448190 CCDC87Q9NVE4 849 aa17.52■□□□□ 0.4
SNHG4-201ENST00000448190 USP16Q9Y5T5 823 aa17.52■□□□□ 0.4
SNHG4-201ENST00000448190 RGPD3A6NKT7 1758 aaPredicted RBP17.52■□□□□ 0.4
SNHG4-201ENST00000448190 RGPD4Q7Z3J3 1758 aa17.52■□□□□ 0.4
SNHG4-201ENST00000448190 STARD3NLO95772 234 aa17.51■□□□□ 0.39
SNHG4-201ENST00000448190 A1BGP04217 495 aa17.51■□□□□ 0.39
SNHG4-201ENST00000448190 ARHGEF1Q92888 912 aaKnown RBP17.51■□□□□ 0.39
SNHG4-201ENST00000448190 HEG1Q9ULI3 1381 aa17.51■□□□□ 0.39
SNHG4-201ENST00000448190 SCN11AQ9UI33 1791 aa17.51■□□□□ 0.39
SNHG4-201ENST00000448190 PIP4K2AP48426 406 aaPredicted RBP17.5■□□□□ 0.39
SNHG4-201ENST00000448190 EIF4A1P60842 406 aaKnown RBP17.5■□□□□ 0.39
SNHG4-201ENST00000448190 FLAD1Q8NFF5 587 aa17.5■□□□□ 0.39
SNHG4-201ENST00000448190 MTFR1LQ9H019 292 aa17.5■□□□□ 0.39
SNHG4-201ENST00000448190 LY75O60449 1722 aa17.5■□□□□ 0.39
SNHG4-201ENST00000448190 CNTNAP4Q9C0A0 1308 aa17.49■□□□□ 0.39
SNHG4-201ENST00000448190 SNRPA1P09661 255 aaKnown RBP17.49■□□□□ 0.39
SNHG4-201ENST00000448190 SSFA2P28290 1259 aa17.49■□□□□ 0.39
SNHG4-201ENST00000448190 TEX13AQ9BXU3 409 aaPredicted RBP17.49■□□□□ 0.39
SNHG4-201ENST00000448190 ZBTB1Q9Y2K1 713 aa17.49■□□□□ 0.39
SNHG4-201ENST00000448190 ZNF330Q9Y3S2 320 aaPredicted RBP17.49■□□□□ 0.39
SNHG4-201ENST00000448190 PAPPAQ13219 1627 aa17.49■□□□□ 0.39
SNHG4-201ENST00000448190 ADAMTS7Q9UKP4 1686 aa17.48■□□□□ 0.39
SNHG4-201ENST00000448190 KCPQ6ZWJ8 1503 aa17.48■□□□□ 0.39
SNHG4-201ENST00000448190 RFC4P35249 363 aa17.48■□□□□ 0.39
SNHG4-201ENST00000448190 PTGER2P43116 358 aa17.48■□□□□ 0.39
SNHG4-201ENST00000448190 SLC16A10Q8TF71 515 aa17.48■□□□□ 0.39
SNHG4-201ENST00000448190 ARXQ96QS3 562 aa17.48■□□□□ 0.39
SNHG4-201ENST00000448190 PPP1R1BQ9UD71 204 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms