RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 IFNL2Q8IZJ0 200 aa9.97□□□□□ -0.81
AC004540.1-206ENST00000448056 GAS2L2Q8NHY3 880 aa9.97□□□□□ -0.81
AC004540.1-206ENST00000448056 PCDH11XQ9BZA7 1347 aa9.97□□□□□ -0.81
AC004540.1-206ENST00000448056 PCDH11YQ9BZA8 1340 aa9.97□□□□□ -0.81
AC004540.1-206ENST00000448056 MAPK8IP3Q9UPT6 1336 aa9.97□□□□□ -0.81
AC004540.1-206ENST00000448056 APAF1O14727 1248 aa9.96□□□□□ -0.82
AC004540.1-206ENST00000448056 PYGBP11216 843 aa9.96□□□□□ -0.82
AC004540.1-206ENST00000448056 CD44P16070 742 aaKnown RBP9.96□□□□□ -0.82
AC004540.1-206ENST00000448056 TMPOP42166 694 aaKnown RBP9.96□□□□□ -0.82
AC004540.1-206ENST00000448056 NKX1-1Q15270 411 aaPredicted RBP9.96□□□□□ -0.82
AC004540.1-206ENST00000448056 NFE2L2Q16236 605 aa9.96□□□□□ -0.82
AC004540.1-206ENST00000448056 AKAP4Q5JQC9 854 aa9.96□□□□□ -0.82
AC004540.1-206ENST00000448056 C1orf141Q5JVX7 400 aa9.96□□□□□ -0.82
AC004540.1-206ENST00000448056 GNAT3A8MTJ3 354 aa9.95□□□□□ -0.82
AC004540.1-206ENST00000448056 HSP90AB1P08238 724 aaKnown RBP9.95□□□□□ -0.82
AC004540.1-206ENST00000448056 RIPK4P57078 832 aa9.95□□□□□ -0.82
AC004540.1-206ENST00000448056 FAM182BQ5T319 152 aa9.95□□□□□ -0.82
AC004540.1-206ENST00000448056 RGS12O14924 1447 aa9.95□□□□□ -0.82
AC004540.1-206ENST00000448056 TNS2Q63HR2 1409 aa9.95□□□□□ -0.82
AC004540.1-206ENST00000448056 THSD7AQ9UPZ6 1657 aa9.95□□□□□ -0.82
AC004540.1-206ENST00000448056 HTATSF1O43719 755 aaKnown RBP9.94□□□□□ -0.82
AC004540.1-206ENST00000448056 NEUROD2Q15784 382 aa9.94□□□□□ -0.82
AC004540.1-206ENST00000448056 MPRIPQ6WCQ1 1025 aa9.94□□□□□ -0.82
AC004540.1-206ENST00000448056 FAM196AQ6ZSG2 479 aa9.94□□□□□ -0.82
AC004540.1-206ENST00000448056 DCAF5Q96JK2 942 aa9.94□□□□□ -0.82
AC004540.1-206ENST00000448056 LGR6Q9HBX8 967 aa9.94□□□□□ -0.82
AC004540.1-206ENST00000448056 RRP7AQ9Y3A4 280 aaKnown RBP9.94□□□□□ -0.82
AC004540.1-206ENST00000448056 SENP3-EIF4A1A0A087X0R7 540 aa9.93□□□□□ -0.82
AC004540.1-206ENST00000448056 RNMTO43148 476 aaKnown RBP9.93□□□□□ -0.82
AC004540.1-206ENST00000448056 IL17REQ8NFR9 667 aa9.93□□□□□ -0.82
AC004540.1-206ENST00000448056 RTF1Q92541 710 aaKnown RBP9.93□□□□□ -0.82
AC004540.1-206ENST00000448056 RNF25Q96BH1 459 aaPredicted RBP9.93□□□□□ -0.82
AC004540.1-206ENST00000448056 PARP4Q9UKK3 1724 aaKnown RBP9.93□□□□□ -0.82
AC004540.1-206ENST00000448056 MAP3K5Q99683 1374 aa9.92□□□□□ -0.82
AC004540.1-206ENST00000448056 ERVV-2B6SEH9 535 aa9.92□□□□□ -0.82
AC004540.1-206ENST00000448056 PRIM1P49642 420 aaKnown RBP9.92□□□□□ -0.82
AC004540.1-206ENST00000448056 POTEHQ6S545 545 aa9.92□□□□□ -0.82
AC004540.1-206ENST00000448056 MCM10Q7L590 875 aa9.92□□□□□ -0.82
AC004540.1-206ENST00000448056 TRIM35Q9UPQ4 493 aa9.92□□□□□ -0.82
AC004540.1-206ENST00000448056 LRRC37A3O60309 1634 aa9.92□□□□□ -0.82
AC004540.1-206ENST00000448056 BCL9O00512 1426 aa9.91□□□□□ -0.82
AC004540.1-206ENST00000448056 PKD1L3Q7Z443 1732 aa9.91□□□□□ -0.82
AC004540.1-206ENST00000448056 LMOD3Q0VAK6 560 aa9.91□□□□□ -0.82
AC004540.1-206ENST00000448056 DCTN1Q14203 1278 aa9.91□□□□□ -0.82
AC004540.1-206ENST00000448056 CCDC27Q2M243 656 aa9.91□□□□□ -0.82
AC004540.1-206ENST00000448056 NGEFQ8N5V2 710 aa9.91□□□□□ -0.82
AC004540.1-206ENST00000448056 ACSBG1Q96GR2 724 aa9.91□□□□□ -0.82
AC004540.1-206ENST00000448056 WNK3Q9BYP7 1800 aa9.91□□□□□ -0.82
AC004540.1-206ENST00000448056 HAX1O00165 279 aa9.9□□□□□ -0.82
AC004540.1-206ENST00000448056 KCNQ2O43526 872 aa9.9□□□□□ -0.82
AC004540.1-206ENST00000448056 WWC1Q8IX03 1113 aa9.9□□□□□ -0.82
AC004540.1-206ENST00000448056 NFATC2IPQ8NCF5 419 aa9.9□□□□□ -0.82
AC004540.1-206ENST00000448056 KIF12Q96FN5 646 aa9.9□□□□□ -0.82
AC004540.1-206ENST00000448056 THUMPD2Q9BTF0 503 aaKnown RBP9.9□□□□□ -0.82
AC004540.1-206ENST00000448056 SALL2Q9Y467 1007 aaPredicted RBP9.9□□□□□ -0.82
AC004540.1-206ENST00000448056 CEMIPQ8WUJ3 1361 aa9.89□□□□□ -0.83
AC004540.1-206ENST00000448056 RIOK3O14730 519 aaKnown RBP9.89□□□□□ -0.83
AC004540.1-206ENST00000448056 CABP4P57796 275 aa9.89□□□□□ -0.83
AC004540.1-206ENST00000448056 PTF1AQ7RTS3 328 aa9.89□□□□□ -0.83
AC004540.1-206ENST00000448056 PIGBQ92521 554 aa9.89□□□□□ -0.83
AC004540.1-206ENST00000448056 SYTL4Q96C24 671 aaPredicted RBP9.89□□□□□ -0.83
AC004540.1-206ENST00000448056 BCL11BQ9C0K0 894 aaPredicted RBP9.89□□□□□ -0.83
AC004540.1-206ENST00000448056 SLC52A2Q9HAB3 445 aa9.89□□□□□ -0.83
AC004540.1-206ENST00000448056 KDM6AO15550 1401 aaPredicted RBP9.89□□□□□ -0.83
AC004540.1-206ENST00000448056 BRWD3Q6RI45 1802 aa9.89□□□□□ -0.83
AC004540.1-206ENST00000448056 SHANK3Q9BYB0 1731 aa9.88□□□□□ -0.83
AC004540.1-206ENST00000448056 TRIM37O94972 964 aa9.88□□□□□ -0.83
AC004540.1-206ENST00000448056 EVX2Q03828 476 aa9.88□□□□□ -0.83
AC004540.1-206ENST00000448056 TEFQ10587 303 aa9.88□□□□□ -0.83
AC004540.1-206ENST00000448056 TAF7Q15545 349 aaPredicted RBP9.88□□□□□ -0.83
AC004540.1-206ENST00000448056 SGIP1Q9BQI5 828 aa9.88□□□□□ -0.83
AC004540.1-206ENST00000448056 TMOD3Q9NYL9 352 aa9.88□□□□□ -0.83
AC004540.1-206ENST00000448056 HNRNPUQ00839 825 aaKnown RBP eCLIP9.87□□□□□ -0.83
AC004540.1-206ENST00000448056 WDR63Q8IWG1 891 aa9.87□□□□□ -0.83
AC004540.1-206ENST00000448056 ZNF579Q8NAF0 562 aaKnown RBP9.87□□□□□ -0.83
AC004540.1-206ENST00000448056 EP400Q96L91 3159 aa9.86□□□□□ -0.83
AC004540.1-206ENST00000448056 BTBD11A6QL63 1104 aa9.86□□□□□ -0.83
AC004540.1-206ENST00000448056 MAP3K13O43283 966 aa9.86□□□□□ -0.83
AC004540.1-206ENST00000448056 CALD1Q05682 793 aaKnown RBP9.86□□□□□ -0.83
AC004540.1-206ENST00000448056 MIS18AQ9NYP9 233 aa9.86□□□□□ -0.83
AC004540.1-206ENST00000448056 ASAP1Q9ULH1 1129 aa9.86□□□□□ -0.83
AC004540.1-206ENST00000448056 ZNF521Q96K83 1311 aa9.85□□□□□ -0.83
AC004540.1-206ENST00000448056 CHL1O00533 1208 aa9.85□□□□□ -0.83
AC004540.1-206ENST00000448056 ZNF853P0CG23 659 aa9.85□□□□□ -0.83
AC004540.1-206ENST00000448056 CCDC125Q86Z20 511 aa9.85□□□□□ -0.83
AC004540.1-206ENST00000448056 CFAP44Q96MT7 982 aa9.85□□□□□ -0.83
AC004540.1-206ENST00000448056 ATG3Q9NT62 314 aa9.85□□□□□ -0.83
AC004540.1-206ENST00000448056 BABAM1Q9NWV8 329 aa9.85□□□□□ -0.83
AC004540.1-206ENST00000448056 LAS1LQ9Y4W2 734 aaKnown RBP9.85□□□□□ -0.83
AC004540.1-206ENST00000448056 IL16Q14005 1332 aa9.84□□□□□ -0.83
AC004540.1-206ENST00000448056 APBA3O96018 575 aa9.84□□□□□ -0.83
AC004540.1-206ENST00000448056 SLC39A6Q13433 755 aa9.84□□□□□ -0.83
AC004540.1-206ENST00000448056 ZNF790Q6PG37 636 aa9.84□□□□□ -0.83
AC004540.1-206ENST00000448056 ZNF467Q7Z7K2 595 aaPredicted RBP9.84□□□□□ -0.83
AC004540.1-206ENST00000448056 PHF12Q96QT6 1004 aa9.84□□□□□ -0.83
AC004540.1-206ENST00000448056 IFT57Q9NWB7 429 aa9.84□□□□□ -0.83
AC004540.1-206ENST00000448056 TAOK2Q9UL54 1235 aa9.84□□□□□ -0.83
AC004540.1-206ENST00000448056 ADAMTS7Q9UKP4 1686 aa9.83□□□□□ -0.84
AC004540.1-206ENST00000448056 PLSCR1O15162 318 aa9.83□□□□□ -0.84
AC004540.1-206ENST00000448056 KCNQ3O43525 872 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms