RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 SLC52A2Q9HAB3 445 aa32.01■■■□□ 2.71
RFFL-206ENST00000447669 USP21Q9UK80 565 aa32.01■■■□□ 2.71
RFFL-206ENST00000447669 WNK3Q9BYP7 1800 aa32.01■■■□□ 2.71
RFFL-206ENST00000447669 CANXP27824 592 aaKnown RBP32■■■□□ 2.71
RFFL-206ENST00000447669 SLC39A6Q13433 755 aa32■■■□□ 2.71
RFFL-206ENST00000447669 KDM3BQ7LBC6 1761 aa31.99■■■□□ 2.71
RFFL-206ENST00000447669 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.99■■■□□ 2.71
RFFL-206ENST00000447669 CRBNQ96SW2 442 aa31.99■■■□□ 2.71
RFFL-206ENST00000447669 NECTIN2Q92692 538 aa31.97■■■□□ 2.71
RFFL-206ENST00000447669 NOB1Q9ULX3 412 aaKnown RBP31.97■■■□□ 2.71
RFFL-206ENST00000447669 HSP90AB1P08238 724 aaKnown RBP31.97■■■□□ 2.71
RFFL-206ENST00000447669 CLUAP1Q96AJ1 413 aa31.97■■■□□ 2.71
RFFL-206ENST00000447669 BABAM1Q9NWV8 329 aa31.97■■■□□ 2.71
RFFL-206ENST00000447669 EXOC5O00471 708 aa31.96■■■□□ 2.71
RFFL-206ENST00000447669 EIF4A1P60842 406 aaKnown RBP31.96■■■□□ 2.71
RFFL-206ENST00000447669 PANK1Q8TE04 598 aa31.96■■■□□ 2.71
RFFL-206ENST00000447669 FAM98CQ17RN3 349 aaKnown RBP31.95■■■□□ 2.71
RFFL-206ENST00000447669 ALDH1L2Q3SY69 923 aa31.95■■■□□ 2.71
RFFL-206ENST00000447669 VPS72Q15906 364 aa31.95■■■□□ 2.7
RFFL-206ENST00000447669 MRPL50Q8N5N7 158 aaKnown RBP31.95■■■□□ 2.7
RFFL-206ENST00000447669 THRAP3Q9Y2W1 955 aaKnown RBP31.95■■■□□ 2.7
RFFL-206ENST00000447669 KAT6BQ8WYB5 2073 aa31.94■■■□□ 2.7
RFFL-206ENST00000447669 AFF2P51816 1311 aa31.94■■■□□ 2.7
RFFL-206ENST00000447669 CABP4P57796 275 aa31.94■■■□□ 2.7
RFFL-206ENST00000447669 NKX1-1Q15270 411 aaPredicted RBP31.94■■■□□ 2.7
RFFL-206ENST00000447669 RLBP1P12271 317 aa31.93■■■□□ 2.7
RFFL-206ENST00000447669 PRAMEF22A3QJZ6 481 aa31.91■■■□□ 2.7
RFFL-206ENST00000447669 ZNF428Q96B54 188 aa31.91■■■□□ 2.7
RFFL-206ENST00000447669 TOGARAM1Q9Y4F4 1720 aa31.91■■■□□ 2.7
RFFL-206ENST00000447669 DDB1Q16531 1140 aa31.9■■■□□ 2.7
RFFL-206ENST00000447669 MRC1P22897 1456 aa31.89■■■□□ 2.7
RFFL-206ENST00000447669 ZNF790Q6PG37 636 aa31.89■■■□□ 2.7
RFFL-206ENST00000447669 BARGINQ6ZT62 677 aa31.89■■■□□ 2.7
RFFL-206ENST00000447669 TRIM27P14373 513 aa31.88■■■□□ 2.69
RFFL-206ENST00000447669 ZKSCAN2Q63HK3 967 aa31.88■■■□□ 2.69
RFFL-206ENST00000447669 TNS2Q63HR2 1409 aa31.87■■■□□ 2.69
RFFL-206ENST00000447669 COG6Q9Y2V7 657 aa31.87■■■□□ 2.69
RFFL-206ENST00000447669 EIF2S2P20042 333 aaKnown RBP31.87■■■□□ 2.69
RFFL-206ENST00000447669 CDCA7Q9BWT1 371 aaPredicted RBP31.86■■■□□ 2.69
RFFL-206ENST00000447669 B4GALNT3Q6L9W6 998 aa31.85■■■□□ 2.69
RFFL-206ENST00000447669 ERVV-2B6SEH9 535 aa31.85■■■□□ 2.69
RFFL-206ENST00000447669 SLC4A2P04920 1241 aa31.85■■■□□ 2.69
RFFL-206ENST00000447669 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.84■■■□□ 2.69
RFFL-206ENST00000447669 ERICH6BQ5W0A0 696 aa31.84■■■□□ 2.69
RFFL-206ENST00000447669 ATF7IPQ6VMQ6 1270 aa31.84■■■□□ 2.69
RFFL-206ENST00000447669 MARCH10Q8NA82 808 aaPredicted RBP31.84■■■□□ 2.69
RFFL-206ENST00000447669 A0A0G2JS52 829 aa31.83■■■□□ 2.69
RFFL-206ENST00000447669 MYT1Q01538 1121 aa31.83■■■□□ 2.69
RFFL-206ENST00000447669 PDE3AQ14432 1141 aa31.83■■■□□ 2.69
RFFL-206ENST00000447669 PPP4R2Q9NY27 417 aa31.83■■■□□ 2.69
RFFL-206ENST00000447669 KIF16BQ96L93 1317 aa31.83■■■□□ 2.69
RFFL-206ENST00000447669 BRPF1P55201 1214 aaPredicted RBP31.83■■■□□ 2.69
RFFL-206ENST00000447669 ZNF496Q96IT1 587 aaPredicted RBP31.83■■■□□ 2.69
RFFL-206ENST00000447669 G2E3Q7L622 706 aa31.82■■■□□ 2.68
RFFL-206ENST00000447669 GIGYF1O75420 1035 aaPredicted RBP31.82■■■□□ 2.68
RFFL-206ENST00000447669 HDGFL1Q5TGJ6 251 aa31.82■■■□□ 2.68
RFFL-206ENST00000447669 DZIP1LQ8IYY4 767 aaKnown RBP31.8■■■□□ 2.68
RFFL-206ENST00000447669 HEG1Q9ULI3 1381 aa31.8■■■□□ 2.68
RFFL-206ENST00000447669 ITGB4P16144 1822 aa31.8■■■□□ 2.68
RFFL-206ENST00000447669 TTC5Q8N0Z6 440 aa31.8■■■□□ 2.68
RFFL-206ENST00000447669 GJD4Q96KN9 370 aaPredicted RBP31.8■■■□□ 2.68
RFFL-206ENST00000447669 GLI3P10071 1580 aa31.79■■■□□ 2.68
RFFL-206ENST00000447669 FTSJ3Q8IY81 847 aaKnown RBP31.79■■■□□ 2.68
RFFL-206ENST00000447669 PIGBQ92521 554 aa31.79■■■□□ 2.68
RFFL-206ENST00000447669 SYTL4Q96C24 671 aaPredicted RBP31.79■■■□□ 2.68
RFFL-206ENST00000447669 CCDC30Q5VVM6 783 aa31.78■■■□□ 2.68
RFFL-206ENST00000447669 TMOD3Q9NYL9 352 aa31.78■■■□□ 2.68
RFFL-206ENST00000447669 IPO8O15397 1037 aaKnown RBP31.77■■■□□ 2.68
RFFL-206ENST00000447669 ANXA1P04083 346 aa31.77■■■□□ 2.68
RFFL-206ENST00000447669 ACSBG1Q96GR2 724 aa31.77■■■□□ 2.68
RFFL-206ENST00000447669 C5P01031 1676 aa31.76■■■□□ 2.67
RFFL-206ENST00000447669 STK31Q9BXU1 1019 aa31.76■■■□□ 2.67
RFFL-206ENST00000447669 PRIM1P49642 420 aaKnown RBP31.75■■■□□ 2.67
RFFL-206ENST00000447669 TMEM57Q8N5G2 664 aa31.75■■■□□ 2.67
RFFL-206ENST00000447669 QTRT2Q9H974 415 aaKnown RBP31.75■■■□□ 2.67
RFFL-206ENST00000447669 PTCD1O75127 700 aaKnown RBP31.75■■■□□ 2.67
RFFL-206ENST00000447669 CHPF2Q9P2E5 772 aa31.75■■■□□ 2.67
RFFL-206ENST00000447669 ASAP1Q9ULH1 1129 aa31.75■■■□□ 2.67
RFFL-206ENST00000447669 TRPC5Q9UL62 973 aaPredicted RBP31.74■■■□□ 2.67
RFFL-206ENST00000447669 ATRNO75882 1429 aa31.74■■■□□ 2.67
RFFL-206ENST00000447669 DOT1LQ8TEK3 1739 aa31.74■■■□□ 2.67
RFFL-206ENST00000447669 FAM182BQ5T319 152 aa31.73■■■□□ 2.67
RFFL-206ENST00000447669 PHAXQ9H814 394 aaKnown RBP31.73■■■□□ 2.67
RFFL-206ENST00000447669 HOXB7P09629 217 aa31.72■■■□□ 2.67
RFFL-206ENST00000447669 USP16Q9Y5T5 823 aa31.72■■■□□ 2.67
RFFL-206ENST00000447669 SOS1Q07889 1333 aaPredicted RBP31.72■■■□□ 2.67
RFFL-206ENST00000447669 FMNL2Q96PY5 1086 aa31.71■■■□□ 2.67
RFFL-206ENST00000447669 PROSER3Q2NL68 480 aa31.71■■■□□ 2.67
RFFL-206ENST00000447669 ITPRIPQ8IWB1 547 aa31.71■■■□□ 2.67
RFFL-206ENST00000447669 ARHGAP45Q92619 1136 aa31.71■■■□□ 2.67
RFFL-206ENST00000447669 MVPQ14764 893 aaKnown RBP31.7■■■□□ 2.67
RFFL-206ENST00000447669 CCDC136Q96JN2 1154 aa31.7■■■□□ 2.66
RFFL-206ENST00000447669 RGS12O14924 1447 aa31.69■■■□□ 2.66
RFFL-206ENST00000447669 PAPPAQ13219 1627 aa31.69■■■□□ 2.66
RFFL-206ENST00000447669 PIP4K2AP48426 406 aaPredicted RBP31.69■■■□□ 2.66
RFFL-206ENST00000447669 ATG3Q9NT62 314 aa31.69■■■□□ 2.66
RFFL-206ENST00000447669 F6X3S4 739 aa31.68■■■□□ 2.66
RFFL-206ENST00000447669 THSD7AQ9UPZ6 1657 aa31.68■■■□□ 2.66
RFFL-206ENST00000447669 KCPQ6ZWJ8 1503 aa31.68■■■□□ 2.66
RFFL-206ENST00000447669 BCL9O00512 1426 aa31.68■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms