RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 TIMELESSQ9UNS1 1208 aa33.61■■■□□ 2.97
PMS1-214ENST00000446877 TRAPPC3LQ5T215 181 aa33.6■■■□□ 2.97
PMS1-214ENST00000446877 RTCBQ9Y3I0 505 aaKnown RBP33.6■■■□□ 2.97
PMS1-214ENST00000446877 UBR3Q6ZT12 1888 aa33.59■■■□□ 2.97
PMS1-214ENST00000446877 ERVV-2B6SEH9 535 aa33.57■■■□□ 2.96
PMS1-214ENST00000446877 HSP90AB1P08238 724 aaKnown RBP33.57■■■□□ 2.96
PMS1-214ENST00000446877 NLGN1Q8N2Q7 840 aa33.57■■■□□ 2.96
PMS1-214ENST00000446877 RBM42Q9BTD8 480 aaKnown RBP33.57■■■□□ 2.96
PMS1-214ENST00000446877 HSPA6P17066 643 aa33.56■■■□□ 2.96
PMS1-214ENST00000446877 MAP2P11137 1827 aaKnown RBP33.54■■■□□ 2.96
PMS1-214ENST00000446877 IFFO2Q5TF58 517 aa33.54■■■□□ 2.96
PMS1-214ENST00000446877 DCAF5Q96JK2 942 aa33.54■■■□□ 2.96
PMS1-214ENST00000446877 PLEKHG2Q9H7P9 1386 aa33.54■■■□□ 2.96
PMS1-214ENST00000446877 TGFB2P61812 414 aa33.53■■■□□ 2.96
PMS1-214ENST00000446877 PLEKHO1Q53GL0 409 aaPredicted RBP33.53■■■□□ 2.96
PMS1-214ENST00000446877 ANKRD26Q9UPS8 1709 aa33.51■■■□□ 2.96
PMS1-214ENST00000446877 RC3H1Q5TC82 1133 aaKnown RBP33.51■■■□□ 2.95
PMS1-214ENST00000446877 ADRA2BP18089 450 aa33.5■■■□□ 2.95
PMS1-214ENST00000446877 RFC4P35249 363 aa33.49■■■□□ 2.95
PMS1-214ENST00000446877 CABP4P57796 275 aa33.49■■■□□ 2.95
PMS1-214ENST00000446877 ARHGEF1Q92888 912 aaKnown RBP33.49■■■□□ 2.95
PMS1-214ENST00000446877 SLC4A9Q96Q91 983 aa33.49■■■□□ 2.95
PMS1-214ENST00000446877 BCS1LQ9Y276 419 aa33.49■■■□□ 2.95
PMS1-214ENST00000446877 A0A0G2JLW4 131 aa33.48■■■□□ 2.95
PMS1-214ENST00000446877 AMOTQ4VCS5 1084 aa33.48■■■□□ 2.95
PMS1-214ENST00000446877 CCDC87Q9NVE4 849 aa33.48■■■□□ 2.95
PMS1-214ENST00000446877 KDRP35968 1356 aa33.47■■■□□ 2.95
PMS1-214ENST00000446877 ZNF530Q6P9A1 599 aaPredicted RBP33.47■■■□□ 2.95
PMS1-214ENST00000446877 RPS6KA4O75676 772 aa33.46■■■□□ 2.95
PMS1-214ENST00000446877 PARP3Q9Y6F1 533 aa33.45■■■□□ 2.95
PMS1-214ENST00000446877 CNTNAP4Q9C0A0 1308 aa33.45■■■□□ 2.95
PMS1-214ENST00000446877 PXDNLA1KZ92 1463 aa33.44■■■□□ 2.94
PMS1-214ENST00000446877 KIF3CO14782 793 aa33.44■■■□□ 2.94
PMS1-214ENST00000446877 ARHGAP27Q6ZUM4 889 aa33.44■■■□□ 2.94
PMS1-214ENST00000446877 GYS1P13807 737 aa33.43■■■□□ 2.94
PMS1-214ENST00000446877 MTHFSP49914 203 aa33.43■■■□□ 2.94
PMS1-214ENST00000446877 PANK3Q9H999 370 aa33.43■■■□□ 2.94
PMS1-214ENST00000446877 C1orf141Q5JVX7 400 aa33.42■■■□□ 2.94
PMS1-214ENST00000446877 DPEP1P16444 411 aa33.41■■■□□ 2.94
PMS1-214ENST00000446877 PTCD1O75127 700 aaKnown RBP33.4■■■□□ 2.94
PMS1-214ENST00000446877 FCHSD2O94868 740 aa33.4■■■□□ 2.94
PMS1-214ENST00000446877 CICQ96RK0 1608 aaPredicted RBP33.39■■■□□ 2.94
PMS1-214ENST00000446877 C10orf71Q711Q0 1435 aa33.38■■■□□ 2.93
PMS1-214ENST00000446877 EIF4G2P78344 907 aaKnown RBP eCLIP33.38■■■□□ 2.93
PMS1-214ENST00000446877 MORC1Q86VD1 984 aa33.38■■■□□ 2.93
PMS1-214ENST00000446877 NFATC2IPQ8NCF5 419 aa33.36■■■□□ 2.93
PMS1-214ENST00000446877 KDM6AO15550 1401 aaPredicted RBP33.36■■■□□ 2.93
PMS1-214ENST00000446877 CLSPNQ9HAW4 1339 aa33.35■■■□□ 2.93
PMS1-214ENST00000446877 TOMM70O94826 608 aa33.34■■■□□ 2.93
PMS1-214ENST00000446877 AEBP1Q8IUX7 1158 aa33.34■■■□□ 2.93
PMS1-214ENST00000446877 PCGF6Q9BYE7 350 aa33.34■■■□□ 2.93
PMS1-214ENST00000446877 CRKLP46109 303 aaKnown RBP33.33■■■□□ 2.93
PMS1-214ENST00000446877 APLP1P51693 650 aa33.32■■■□□ 2.92
PMS1-214ENST00000446877 SULT6B1Q6IMI4 303 aa33.32■■■□□ 2.92
PMS1-214ENST00000446877 HSPA5P11021 654 aaKnown RBP33.31■■■□□ 2.92
PMS1-214ENST00000446877 PIM2Q9P1W9 311 aa33.31■■■□□ 2.92
PMS1-214ENST00000446877 ZNF831Q5JPB2 1677 aa33.29■■■□□ 2.92
PMS1-214ENST00000446877 SRP68Q9UHB9 627 aaKnown RBP33.29■■■□□ 2.92
PMS1-214ENST00000446877 KIF13BQ9NQT8 1826 aa33.28■■■□□ 2.92
PMS1-214ENST00000446877 KCNA3P22001 575 aa33.27■■■□□ 2.92
PMS1-214ENST00000446877 FKBP8Q14318 412 aa33.27■■■□□ 2.92
PMS1-214ENST00000446877 DALRD3Q5D0E6 543 aaKnown RBP33.27■■■□□ 2.92
PMS1-214ENST00000446877 C9orf131Q5VYM1 1079 aa33.27■■■□□ 2.92
PMS1-214ENST00000446877 C4AP0C0L4 1744 aa33.27■■■□□ 2.92
PMS1-214ENST00000446877 NMRK2Q9NPI5 230 aa33.26■■■□□ 2.91
PMS1-214ENST00000446877 KNSTRNQ9Y448 316 aa33.26■■■□□ 2.91
PMS1-214ENST00000446877 USP42Q9H9J4 1324 aaKnown RBP33.26■■■□□ 2.91
PMS1-214ENST00000446877 N4BP2Q86UW6 1770 aaPredicted RBP33.25■■■□□ 2.91
PMS1-214ENST00000446877 C16orf71Q8IYS4 520 aaPredicted RBP33.23■■■□□ 2.91
PMS1-214ENST00000446877 COL5A3P25940 1745 aaPredicted RBP33.22■■■□□ 2.91
PMS1-214ENST00000446877 KIAA1551Q9HCM1 1747 aa33.22■■■□□ 2.91
PMS1-214ENST00000446877 ZPR1O75312 459 aa33.22■■■□□ 2.91
PMS1-214ENST00000446877 IL13P35225 146 aa33.22■■■□□ 2.91
PMS1-214ENST00000446877 DDR1Q08345 913 aa33.22■■■□□ 2.91
PMS1-214ENST00000446877 AKAP4Q5JQC9 854 aa33.21■■■□□ 2.91
PMS1-214ENST00000446877 INTS5Q6P9B9 1019 aaKnown RBP33.21■■■□□ 2.91
PMS1-214ENST00000446877 CHRNA5P30532 468 aa33.17■■■□□ 2.9
PMS1-214ENST00000446877 DNAJC10Q8IXB1 793 aa33.17■■■□□ 2.9
PMS1-214ENST00000446877 RBM46Q8TBY0 533 aaKnown RBP33.17■■■□□ 2.9
PMS1-214ENST00000446877 SLC52A2Q9HAB3 445 aa33.17■■■□□ 2.9
PMS1-214ENST00000446877 MYH14Q7Z406 1995 aaKnown RBP33.17■■■□□ 2.9
PMS1-214ENST00000446877 KDM2BQ8NHM5 1336 aa33.17■■■□□ 2.9
PMS1-214ENST00000446877 TM4SF1P30408 202 aa33.16■■■□□ 2.9
PMS1-214ENST00000446877 RNF181Q9P0P0 153 aa33.16■■■□□ 2.9
PMS1-214ENST00000446877 POLRMTO00411 1230 aaKnown RBP33.15■■■□□ 2.9
PMS1-214ENST00000446877 USPL1Q5W0Q7 1092 aa33.15■■■□□ 2.9
PMS1-214ENST00000446877 DNAJC5GQ8N7S2 189 aa33.15■■■□□ 2.9
PMS1-214ENST00000446877 LGR6Q9HBX8 967 aa33.14■■■□□ 2.9
PMS1-214ENST00000446877 SOS1Q07889 1333 aaPredicted RBP33.1■■■□□ 2.89
PMS1-214ENST00000446877 CYP19A1P11511 503 aaPredicted RBP33.1■■■□□ 2.89
PMS1-214ENST00000446877 FSTL1Q12841 308 aa33.1■■■□□ 2.89
PMS1-214ENST00000446877 RNMTO43148 476 aaKnown RBP33.09■■■□□ 2.89
PMS1-214ENST00000446877 SLC39A6Q13433 755 aa33.09■■■□□ 2.89
PMS1-214ENST00000446877 NARFQ9UHQ1 456 aa33.09■■■□□ 2.89
PMS1-214ENST00000446877 HMOX1P09601 288 aa33.08■■■□□ 2.89
PMS1-214ENST00000446877 RRAGCQ9HB90 399 aa33.08■■■□□ 2.89
PMS1-214ENST00000446877 AMER1Q5JTC6 1135 aaPredicted RBP33.07■■■□□ 2.88
PMS1-214ENST00000446877 NFIXQ14938 502 aa33.06■■■□□ 2.88
PMS1-214ENST00000446877 BRCA1P38398 1863 aaKnown RBP33.05■■■□□ 2.88
PMS1-214ENST00000446877 KCPQ6ZWJ8 1503 aa33.04■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms