RNA–Protein interactions for RNA: ENST00000444987.1

LRRC42-204, Transcript of leucine rich repeat containing 42, humanhuman

TSL 5

Gene LRRC42, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-204ENST00000444987 TUBGCP6Q96RT7 1819 aa25.27■■□□□ 1.64
LRRC42-204ENST00000444987 RNMTO43148 476 aaKnown RBP25.26■■□□□ 1.63
LRRC42-204ENST00000444987 PRKAR2BP31323 418 aa25.26■■□□□ 1.63
LRRC42-204ENST00000444987 C4BP0C0L5 1744 aa25.26■■□□□ 1.63
LRRC42-204ENST00000444987 NFATC2IPQ8NCF5 419 aa25.25■■□□□ 1.63
LRRC42-204ENST00000444987 MTFR1LQ9H019 292 aa25.25■■□□□ 1.63
LRRC42-204ENST00000444987 SLC52A2Q9HAB3 445 aa25.25■■□□□ 1.63
LRRC42-204ENST00000444987 MYBBP1AQ9BQG0 1328 aaKnown RBP25.25■■□□□ 1.63
LRRC42-204ENST00000444987 MAP3K5Q99683 1374 aa25.25■■□□□ 1.63
LRRC42-204ENST00000444987 FLAD1Q8NFF5 587 aa25.24■■□□□ 1.63
LRRC42-204ENST00000444987 PNPLA7Q6ZV29 1317 aa25.23■■□□□ 1.63
LRRC42-204ENST00000444987 GNAT3A8MTJ3 354 aa25.23■■□□□ 1.63
LRRC42-204ENST00000444987 PDGFDQ9GZP0 370 aaPredicted RBP25.23■■□□□ 1.63
LRRC42-204ENST00000444987 ATP6V1AP38606 617 aa25.22■■□□□ 1.63
LRRC42-204ENST00000444987 PNNQ9H307 717 aaKnown RBP25.22■■□□□ 1.63
LRRC42-204ENST00000444987 LGR6Q9HBX8 967 aa25.22■■□□□ 1.63
LRRC42-204ENST00000444987 CICQ96RK0 1608 aaPredicted RBP25.22■■□□□ 1.63
LRRC42-204ENST00000444987 COL24A1Q17RW2 1714 aa25.2■■□□□ 1.63
LRRC42-204ENST00000444987 ZBTB7AO95365 584 aa25.2■■□□□ 1.62
LRRC42-204ENST00000444987 PHACTR3Q96KR7 559 aa25.2■■□□□ 1.62
LRRC42-204ENST00000444987 ZNF316A6NFI3 1004 aaPredicted RBP25.19■■□□□ 1.62
LRRC42-204ENST00000444987 NEFMP07197 916 aa25.19■■□□□ 1.62
LRRC42-204ENST00000444987 AK7Q96M32 723 aa25.19■■□□□ 1.62
LRRC42-204ENST00000444987 UBR3Q6ZT12 1888 aa25.18■■□□□ 1.62
LRRC42-204ENST00000444987 RBM42Q9BTD8 480 aaKnown RBP25.18■■□□□ 1.62
LRRC42-204ENST00000444987 COL5A3P25940 1745 aaPredicted RBP25.17■■□□□ 1.62
LRRC42-204ENST00000444987 ITPK1Q13572 414 aa25.17■■□□□ 1.62
LRRC42-204ENST00000444987 PRKRIP1Q9H875 184 aaPredicted RBP25.17■■□□□ 1.62
LRRC42-204ENST00000444987 PPP1R1BQ9UD71 204 aaPredicted RBP25.17■■□□□ 1.62
LRRC42-204ENST00000444987 CEMIPQ8WUJ3 1361 aa25.17■■□□□ 1.62
LRRC42-204ENST00000444987 SRCAPQ6ZRS2 3230 aa25.16■■□□□ 1.62
LRRC42-204ENST00000444987 SIPA1L3O60292 1781 aaPredicted RBP25.16■■□□□ 1.62
LRRC42-204ENST00000444987 HTATSF1O43719 755 aaKnown RBP25.16■■□□□ 1.62
LRRC42-204ENST00000444987 PTGER2P43116 358 aa25.16■■□□□ 1.62
LRRC42-204ENST00000444987 LINC00116Q8NCU8 138 aa25.16■■□□□ 1.62
LRRC42-204ENST00000444987 SSFA2P28290 1259 aa25.15■■□□□ 1.62
LRRC42-204ENST00000444987 TEFQ10587 303 aa25.15■■□□□ 1.62
LRRC42-204ENST00000444987 RC3H1Q5TC82 1133 aaKnown RBP25.15■■□□□ 1.62
LRRC42-204ENST00000444987 IL17REQ8NFR9 667 aa25.15■■□□□ 1.62
LRRC42-204ENST00000444987 SGIP1Q9BQI5 828 aa25.15■■□□□ 1.62
LRRC42-204ENST00000444987 ATF5Q9Y2D1 282 aaPredicted RBP25.15■■□□□ 1.62
LRRC42-204ENST00000444987 COL23A1Q86Y22 540 aaPredicted RBP25.14■■□□□ 1.62
LRRC42-204ENST00000444987 SLC4A9Q96Q91 983 aa25.14■■□□□ 1.62
LRRC42-204ENST00000444987 RTF1Q92541 710 aaKnown RBP25.13■■□□□ 1.61
LRRC42-204ENST00000444987 UBR2Q8IWV8 1755 aa25.13■■□□□ 1.61
LRRC42-204ENST00000444987 CNTNAP4Q9C0A0 1308 aa25.12■■□□□ 1.61
LRRC42-204ENST00000444987 PTCD1O75127 700 aaKnown RBP25.12■■□□□ 1.61
LRRC42-204ENST00000444987 PLEKHF1Q96S99 279 aa25.12■■□□□ 1.61
LRRC42-204ENST00000444987 TJP1Q07157 1748 aa25.12■■□□□ 1.61
LRRC42-204ENST00000444987 VSIG10Q8N0Z9 540 aa25.11■■□□□ 1.61
LRRC42-204ENST00000444987 MSH5O43196 834 aa25.1■■□□□ 1.61
LRRC42-204ENST00000444987 KCPQ6ZWJ8 1503 aa25.1■■□□□ 1.61
LRRC42-204ENST00000444987 GNPATO15228 680 aa25.09■■□□□ 1.61
LRRC42-204ENST00000444987 POLD1P28340 1107 aa25.09■■□□□ 1.61
LRRC42-204ENST00000444987 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.08■■□□□ 1.61
LRRC42-204ENST00000444987 ADRA2BP18089 450 aa25.08■■□□□ 1.61
LRRC42-204ENST00000444987 TTC5Q8N0Z6 440 aa25.08■■□□□ 1.61
LRRC42-204ENST00000444987 MAPK8IP3Q9UPT6 1336 aa25.08■■□□□ 1.6
LRRC42-204ENST00000444987 ARXQ96QS3 562 aa25.07■■□□□ 1.6
LRRC42-204ENST00000444987 RTCBQ9Y3I0 505 aaKnown RBP25.07■■□□□ 1.6
LRRC42-204ENST00000444987 DLG5Q8TDM6 1919 aa25.07■■□□□ 1.6
LRRC42-204ENST00000444987 RPS6KA4O75676 772 aa25.06■■□□□ 1.6
LRRC42-204ENST00000444987 SLC39A6Q13433 755 aa25.06■■□□□ 1.6
LRRC42-204ENST00000444987 NFE2L2Q16236 605 aa25.05■■□□□ 1.6
LRRC42-204ENST00000444987 ZNF790Q6PG37 636 aa25.05■■□□□ 1.6
LRRC42-204ENST00000444987 PHF14O94880 888 aa25.04■■□□□ 1.6
LRRC42-204ENST00000444987 MYH14Q7Z406 1995 aaKnown RBP25.04■■□□□ 1.6
LRRC42-204ENST00000444987 CRKLP46109 303 aaKnown RBP25.03■■□□□ 1.6
LRRC42-204ENST00000444987 WDR43Q15061 677 aaKnown RBP eCLIP25.03■■□□□ 1.6
LRRC42-204ENST00000444987 TRAPPC3LQ5T215 181 aa25.03■■□□□ 1.6
LRRC42-204ENST00000444987 AMIGO3Q86WK7 504 aa25.03■■□□□ 1.6
LRRC42-204ENST00000444987 BTBD11A6QL63 1104 aa25.02■■□□□ 1.6
LRRC42-204ENST00000444987 MCM10Q7L590 875 aa25.02■■□□□ 1.6
LRRC42-204ENST00000444987 TEX13AQ9BXU3 409 aaPredicted RBP25.02■■□□□ 1.6
LRRC42-204ENST00000444987 CYP19A1P11511 503 aaPredicted RBP25■■□□□ 1.59
LRRC42-204ENST00000444987 DNAJC10Q8IXB1 793 aa25■■□□□ 1.59
LRRC42-204ENST00000444987 FMNL2Q96PY5 1086 aa25■■□□□ 1.59
LRRC42-204ENST00000444987 CCDC87Q9NVE4 849 aa25■■□□□ 1.59
LRRC42-204ENST00000444987 HEG1Q9ULI3 1381 aa25■■□□□ 1.59
LRRC42-204ENST00000444987 TAF7Q15545 349 aaPredicted RBP24.98■■□□□ 1.59
LRRC42-204ENST00000444987 INTS5Q6P9B9 1019 aaKnown RBP24.98■■□□□ 1.59
LRRC42-204ENST00000444987 PNISRQ8TF01 805 aaKnown RBP24.98■■□□□ 1.59
LRRC42-204ENST00000444987 ZNF496Q96IT1 587 aaPredicted RBP24.98■■□□□ 1.59
LRRC42-204ENST00000444987 FHDC1Q9C0D6 1143 aaPredicted RBP24.98■■□□□ 1.59
LRRC42-204ENST00000444987 C4AP0C0L4 1744 aa24.98■■□□□ 1.59
LRRC42-204ENST00000444987 STARD3NLO95772 234 aa24.97■■□□□ 1.59
LRRC42-204ENST00000444987 LMOD3Q0VAK6 560 aa24.97■■□□□ 1.59
LRRC42-204ENST00000444987 ARHGEF1Q92888 912 aaKnown RBP24.97■■□□□ 1.59
LRRC42-204ENST00000444987 SYT17Q9BSW7 474 aa24.97■■□□□ 1.59
LRRC42-204ENST00000444987 RFC4P35249 363 aa24.96■■□□□ 1.59
LRRC42-204ENST00000444987 DCTN1Q14203 1278 aa24.96■■□□□ 1.59
LRRC42-204ENST00000444987 RUNDC1Q96C34 613 aa24.96■■□□□ 1.59
LRRC42-204ENST00000444987 MSL1Q68DK7 614 aa24.95■■□□□ 1.58
LRRC42-204ENST00000444987 SMIM5Q71RC9 77 aa24.95■■□□□ 1.58
LRRC42-204ENST00000444987 NLGN1Q8N2Q7 840 aa24.95■■□□□ 1.58
LRRC42-204ENST00000444987 DCAF8L1A6NGE4 600 aa24.94■■□□□ 1.58
LRRC42-204ENST00000444987 ANP32CO43423 234 aa24.94■■□□□ 1.58
LRRC42-204ENST00000444987 TMPOP42166 694 aaKnown RBP24.94■■□□□ 1.58
LRRC42-204ENST00000444987 ADAMTS8Q9UP79 889 aa24.94■■□□□ 1.58
LRRC42-204ENST00000444987 RIPK4P57078 832 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms