RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.72■□□□□ 0.757e-7■■■□□ 17.2
SNX13-204ENST00000444712 PXDNLA1KZ92 1463 aa19.72■□□□□ 0.75
SNX13-204ENST00000444712 TATP17735 454 aaPredicted RBP19.71■□□□□ 0.75
SNX13-204ENST00000444712 ERICH6Q7L0X2 663 aa19.71■□□□□ 0.75
SNX13-204ENST00000444712 NLRP2Q9NX02 1062 aa19.71■□□□□ 0.75
SNX13-204ENST00000444712 CSB-PGBD3P0DP91 1061 aa19.7■□□□□ 0.74
SNX13-204ENST00000444712 LGR6Q9HBX8 967 aa19.7■□□□□ 0.74
SNX13-204ENST00000444712 SPG7Q9UQ90 795 aa19.7■□□□□ 0.74
SNX13-204ENST00000444712 PARP4Q9UKK3 1724 aaKnown RBP19.7■□□□□ 0.74
SNX13-204ENST00000444712 NUCB1Q02818 461 aa19.69■□□□□ 0.74
SNX13-204ENST00000444712 BTBD11A6QL63 1104 aa19.69■□□□□ 0.74
SNX13-204ENST00000444712 EIF4A1P60842 406 aaKnown RBP19.69■□□□□ 0.74
SNX13-204ENST00000444712 DDRGK1Q96HY6 314 aa19.69■□□□□ 0.74
SNX13-204ENST00000444712 MSH5O43196 834 aa19.68■□□□□ 0.74
SNX13-204ENST00000444712 FLIIQ13045 1269 aa19.68■□□□□ 0.74
SNX13-204ENST00000444712 MPRIPQ6WCQ1 1025 aa19.68■□□□□ 0.74
SNX13-204ENST00000444712 NPM2Q86SE8 214 aaKnown RBP19.68■□□□□ 0.74
SNX13-204ENST00000444712 RPAP2Q8IXW5 612 aaPredicted RBP19.68■□□□□ 0.74
SNX13-204ENST00000444712 CABLES1Q8TDN4 633 aa19.68■□□□□ 0.74
SNX13-204ENST00000444712 HDGFL1Q5TGJ6 251 aa19.68■□□□□ 0.74
SNX13-204ENST00000444712 C1orf115Q9H7X2 142 aa19.66■□□□□ 0.74
SNX13-204ENST00000444712 FKBP5Q13451 457 aaPredicted RBP19.66■□□□□ 0.74
SNX13-204ENST00000444712 G2E3Q7L622 706 aa19.66■□□□□ 0.74
SNX13-204ENST00000444712 CHD1LQ86WJ1 897 aa19.66■□□□□ 0.74
SNX13-204ENST00000444712 MEGF6O75095 1541 aa19.65■□□□□ 0.74
SNX13-204ENST00000444712 NOP58Q9Y2X3 529 aaKnown RBP19.65■□□□□ 0.74
SNX13-204ENST00000444712 ANKRD44Q8N8A2 993 aa19.64■□□□□ 0.74
SNX13-204ENST00000444712 ATP10DQ9P241 1426 aa19.64■□□□□ 0.74
SNX13-204ENST00000444712 CHRNA2Q15822 529 aa19.64■□□□□ 0.73
SNX13-204ENST00000444712 ZBTB47Q9UFB7 747 aaPredicted RBP19.64■□□□□ 0.73
SNX13-204ENST00000444712 HSP90AB1P08238 724 aaKnown RBP19.63■□□□□ 0.73
SNX13-204ENST00000444712 IFNL2Q8IZJ0 200 aa19.63■□□□□ 0.73
SNX13-204ENST00000444712 PRDM11Q9NQV5 511 aa19.63■□□□□ 0.73
SNX13-204ENST00000444712 MRC1P22897 1456 aa19.63■□□□□ 0.73
SNX13-204ENST00000444712 SLC4A10Q6U841 1118 aa19.63■□□□□ 0.73
SNX13-204ENST00000444712 HMMRO75330 724 aa19.62■□□□□ 0.73
SNX13-204ENST00000444712 GNAI3P08754 354 aa19.62■□□□□ 0.73
SNX13-204ENST00000444712 SIRT2Q8IXJ6 389 aa19.62■□□□□ 0.73
SNX13-204ENST00000444712 WDR17Q8IZU2 1322 aa19.62■□□□□ 0.73
SNX13-204ENST00000444712 PHKG2P15735 406 aa19.61■□□□□ 0.73
SNX13-204ENST00000444712 UPF2Q9HAU5 1272 aaKnown RBP19.61■□□□□ 0.73
SNX13-204ENST00000444712 HEG1Q9ULI3 1381 aa19.61■□□□□ 0.73
SNX13-204ENST00000444712 ANKRD45Q5TZF3 282 aa19.61■□□□□ 0.73
SNX13-204ENST00000444712 COL5A2P05997 1499 aaPredicted RBP19.6■□□□□ 0.73
SNX13-204ENST00000444712 F6X3S4 739 aa19.6■□□□□ 0.73
SNX13-204ENST00000444712 CEP85Q6P2H3 762 aa19.6■□□□□ 0.73
SNX13-204ENST00000444712 NECTIN2Q92692 538 aa19.6■□□□□ 0.73
SNX13-204ENST00000444712 MEIS3Q99687 375 aa19.6■□□□□ 0.73
SNX13-204ENST00000444712 DCTPP1Q9H773 170 aa19.6■□□□□ 0.73
SNX13-204ENST00000444712 LNPKQ9C0E8 428 aa19.59■□□□□ 0.73
SNX13-204ENST00000444712 KDM6AO15550 1401 aaPredicted RBP19.59■□□□□ 0.73
SNX13-204ENST00000444712 DCAF5Q96JK2 942 aa19.59■□□□□ 0.73
SNX13-204ENST00000444712 SLC52A2Q9HAB3 445 aa19.59■□□□□ 0.73
SNX13-204ENST00000444712 DBF4Q9UBU7 674 aaPredicted RBP19.59■□□□□ 0.73
SNX13-204ENST00000444712 GNAI2P04899 355 aa19.58■□□□□ 0.73
SNX13-204ENST00000444712 EIF2S2P20042 333 aaKnown RBP19.58■□□□□ 0.73
SNX13-204ENST00000444712 GIGYF1O75420 1035 aaPredicted RBP19.57■□□□□ 0.72
SNX13-204ENST00000444712 ANP32EQ9BTT0 268 aa19.57■□□□□ 0.72
SNX13-204ENST00000444712 KCNQ3O43525 872 aa19.56■□□□□ 0.72
SNX13-204ENST00000444712 CHPF2Q9P2E5 772 aa19.56■□□□□ 0.72
SNX13-204ENST00000444712 AHDC1Q5TGY3 1603 aaPredicted RBP19.56■□□□□ 0.72
SNX13-204ENST00000444712 ROBO1Q9Y6N7 1651 aa19.55■□□□□ 0.72
SNX13-204ENST00000444712 TOM1L2Q6ZVM7 507 aa19.55■□□□□ 0.72
SNX13-204ENST00000444712 PCDH11XQ9BZA7 1347 aa19.55■□□□□ 0.72
SNX13-204ENST00000444712 PCDH11YQ9BZA8 1340 aa19.55■□□□□ 0.72
SNX13-204ENST00000444712 C5P01031 1676 aa19.54■□□□□ 0.72
SNX13-204ENST00000444712 BMP2KLQ5H9B9 411 aa19.54■□□□□ 0.72
SNX13-204ENST00000444712 COL22A1Q8NFW1 1626 aaPredicted RBP19.54■□□□□ 0.72
SNX13-204ENST00000444712 ZNF790Q6PG37 636 aa19.54■□□□□ 0.72
SNX13-204ENST00000444712 CARD10Q9BWT7 1032 aa19.54■□□□□ 0.72
SNX13-204ENST00000444712 PHAXQ9H814 394 aaKnown RBP19.54■□□□□ 0.72
SNX13-204ENST00000444712 LAMB4A4D0S4 1761 aa19.53■□□□□ 0.72
SNX13-204ENST00000444712 SRCIN1Q9C0H9 1055 aa19.53■□□□□ 0.72
SNX13-204ENST00000444712 HYPKQ9NX55 129 aa19.53■□□□□ 0.72
SNX13-204ENST00000444712 COL14A1Q05707 1796 aaKnown RBP19.53■□□□□ 0.72
SNX13-204ENST00000444712 EIF5BO60841 1220 aaKnown RBP19.52■□□□□ 0.72
SNX13-204ENST00000444712 CYP27B1O15528 508 aa19.52■□□□□ 0.72
SNX13-204ENST00000444712 DNAAF4Q8WXU2 420 aa19.52■□□□□ 0.72
SNX13-204ENST00000444712 DAXXQ9UER7 740 aaPredicted RBP19.51■□□□□ 0.71
SNX13-204ENST00000444712 SHANK3Q9BYB0 1731 aa19.51■□□□□ 0.71
SNX13-204ENST00000444712 UBTFL1P0CB47 393 aaPredicted RBP19.51■□□□□ 0.71
SNX13-204ENST00000444712 TTC5Q8N0Z6 440 aa19.51■□□□□ 0.71
SNX13-204ENST00000444712 ZCRB1Q8TBF4 217 aaKnown RBP19.5■□□□□ 0.71
SNX13-204ENST00000444712 HDAC5Q9UQL6 1122 aa19.5■□□□□ 0.71
SNX13-204ENST00000444712 DDX58O95786 925 aaKnown RBP19.49■□□□□ 0.71
SNX13-204ENST00000444712 IL2RBP14784 551 aa19.49■□□□□ 0.71
SNX13-204ENST00000444712 EVA1CP58658 441 aa19.49■□□□□ 0.71
SNX13-204ENST00000444712 NFATC2IPQ8NCF5 419 aa19.49■□□□□ 0.71
SNX13-204ENST00000444712 DDX21Q9NR30 783 aaKnown RBP eCLIP19.49■□□□□ 0.71
SNX13-204ENST00000444712 ATP8B2P98198 1209 aa19.49■□□□□ 0.71
SNX13-204ENST00000444712 LTBP4Q8N2S1 1624 aa19.48■□□□□ 0.71
SNX13-204ENST00000444712 CABP4P57796 275 aa19.48■□□□□ 0.71
SNX13-204ENST00000444712 UBR2Q8IWV8 1755 aa19.47■□□□□ 0.71
SNX13-204ENST00000444712 PI4KAP2A4QPH2 592 aa19.47■□□□□ 0.71
SNX13-204ENST00000444712 SEC24BO95487 1268 aa19.47■□□□□ 0.71
SNX13-204ENST00000444712 PI4KAP1Q8N8J0 262 aa19.47■□□□□ 0.71
SNX13-204ENST00000444712 FMNL2Q96PY5 1086 aa19.47■□□□□ 0.71
SNX13-204ENST00000444712 USP44Q9H0E7 712 aa19.47■□□□□ 0.71
SNX13-204ENST00000444712 ADCY9O60503 1353 aa19.47■□□□□ 0.71
SNX13-204ENST00000444712 PAPPAQ13219 1627 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms