RNA–Protein interactions for RNA: ENST00000444172.6

CIRBP-203, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-203ENST00000444172 THUMPD2Q9BTF0 503 aaKnown RBP23.53■■□□□ 1.36
CIRBP-203ENST00000444172 SALL2Q9Y467 1007 aaPredicted RBP23.53■■□□□ 1.36
CIRBP-203ENST00000444172 ADAMTS7Q9UKP4 1686 aa23.53■■□□□ 1.36
CIRBP-203ENST00000444172 CEMIPQ8WUJ3 1361 aa23.52■■□□□ 1.36
CIRBP-203ENST00000444172 EP400Q96L91 3159 aa23.51■■□□□ 1.35
CIRBP-203ENST00000444172 ASAP1Q9ULH1 1129 aa23.51■■□□□ 1.35
CIRBP-203ENST00000444172 TRIM35Q9UPQ4 493 aa23.51■■□□□ 1.35
CIRBP-203ENST00000444172 PLSCR1O15162 318 aa23.5■■□□□ 1.35
CIRBP-203ENST00000444172 EZH2Q15910 746 aaKnown RBP23.5■■□□□ 1.35
CIRBP-203ENST00000444172 SMARCC1Q92922 1105 aaPredicted RBP23.49■■□□□ 1.35
CIRBP-203ENST00000444172 ATG3Q9NT62 314 aa23.49■■□□□ 1.35
CIRBP-203ENST00000444172 SLC39A6Q13433 755 aa23.48■■□□□ 1.35
CIRBP-203ENST00000444172 MRC1P22897 1456 aa23.48■■□□□ 1.35
CIRBP-203ENST00000444172 BTBD11A6QL63 1104 aa23.47■■□□□ 1.35
CIRBP-203ENST00000444172 TAF7Q15545 349 aaPredicted RBP23.47■■□□□ 1.35
CIRBP-203ENST00000444172 CAMKK2Q96RR4 588 aa23.47■■□□□ 1.35
CIRBP-203ENST00000444172 PALLDQ8WX93 1383 aa23.46■■□□□ 1.35
CIRBP-203ENST00000444172 SIPA1L3O60292 1781 aaPredicted RBP23.45■■□□□ 1.34
CIRBP-203ENST00000444172 RBM42Q9BTD8 480 aaKnown RBP23.45■■□□□ 1.34
CIRBP-203ENST00000444172 LAS1LQ9Y4W2 734 aaKnown RBP23.45■■□□□ 1.34
CIRBP-203ENST00000444172 TXNRD1Q16881 649 aa23.44■■□□□ 1.34
CIRBP-203ENST00000444172 TTC5Q8N0Z6 440 aa23.44■■□□□ 1.34
CIRBP-203ENST00000444172 MIS18AQ9NYP9 233 aa23.44■■□□□ 1.34
CIRBP-203ENST00000444172 PTCD1O75127 700 aaKnown RBP23.43■■□□□ 1.34
CIRBP-203ENST00000444172 KCNQ4P56696 695 aa23.42■■□□□ 1.34
CIRBP-203ENST00000444172 PROM2Q8N271 834 aa23.42■■□□□ 1.34
CIRBP-203ENST00000444172 CCNL1Q9UK58 526 aaPredicted RBP23.42■■□□□ 1.34
CIRBP-203ENST00000444172 CCDC27Q2M243 656 aa23.41■■□□□ 1.34
CIRBP-203ENST00000444172 ZNF790Q6PG37 636 aa23.41■■□□□ 1.34
CIRBP-203ENST00000444172 WWC1Q8IX03 1113 aa23.41■■□□□ 1.34
CIRBP-203ENST00000444172 RGPD3A6NKT7 1758 aaPredicted RBP23.41■■□□□ 1.34
CIRBP-203ENST00000444172 RGPD4Q7Z3J3 1758 aa23.41■■□□□ 1.34
CIRBP-203ENST00000444172 LY75O60449 1722 aa23.41■■□□□ 1.34
CIRBP-203ENST00000444172 LOC102724428A0A0B4J2F2 783 aa23.4■■□□□ 1.34
CIRBP-203ENST00000444172 KCNQ3O43525 872 aa23.4■■□□□ 1.34
CIRBP-203ENST00000444172 SIK1P57059 783 aa23.4■■□□□ 1.34
CIRBP-203ENST00000444172 NCBP3Q53F19 620 aaKnown RBP23.4■■□□□ 1.34
CIRBP-203ENST00000444172 ATP6V1AP38606 617 aa23.39■■□□□ 1.33
CIRBP-203ENST00000444172 CALD1Q05682 793 aaKnown RBP23.39■■□□□ 1.33
CIRBP-203ENST00000444172 NGEFQ8N5V2 710 aa23.39■■□□□ 1.33
CIRBP-203ENST00000444172 TSPYL4Q9UJ04 414 aa23.39■■□□□ 1.33
CIRBP-203ENST00000444172 SLC27A3Q5K4L6 730 aa23.38■■□□□ 1.33
CIRBP-203ENST00000444172 PAPPAQ13219 1627 aa23.37■■□□□ 1.33
CIRBP-203ENST00000444172 LRRC4BQ9NT99 713 aa23.37■■□□□ 1.33
CIRBP-203ENST00000444172 ZNF496Q96IT1 587 aaPredicted RBP23.35■■□□□ 1.33
CIRBP-203ENST00000444172 CFAP44Q96MT7 982 aa23.35■■□□□ 1.33
CIRBP-203ENST00000444172 RREB1Q92766 1687 aa23.35■■□□□ 1.33
CIRBP-203ENST00000444172 GNAI1P63096 354 aa23.34■■□□□ 1.33
CIRBP-203ENST00000444172 HNRNPUQ00839 825 aaKnown RBP eCLIP23.34■■□□□ 1.33
CIRBP-203ENST00000444172 FMNL2Q96PY5 1086 aa23.34■■□□□ 1.33
CIRBP-203ENST00000444172 SLC4A9Q96Q91 983 aa23.34■■□□□ 1.33
CIRBP-203ENST00000444172 BABAM1Q9NWV8 329 aa23.34■■□□□ 1.33
CIRBP-203ENST00000444172 KDM3BQ7LBC6 1761 aa23.33■■□□□ 1.33
CIRBP-203ENST00000444172 UBR2Q8IWV8 1755 aa23.33■■□□□ 1.33
CIRBP-203ENST00000444172 CHL1O00533 1208 aa23.33■■□□□ 1.33
CIRBP-203ENST00000444172 WDR63Q8IWG1 891 aa23.33■■□□□ 1.33
CIRBP-203ENST00000444172 IFT57Q9NWB7 429 aa23.33■■□□□ 1.33
CIRBP-203ENST00000444172 NUP188Q5SRE5 1749 aa23.33■■□□□ 1.32
CIRBP-203ENST00000444172 KCPQ6ZWJ8 1503 aa23.33■■□□□ 1.32
CIRBP-203ENST00000444172 ITPK1Q13572 414 aa23.32■■□□□ 1.32
CIRBP-203ENST00000444172 NBPF14Q5TI25 921 aa23.32■■□□□ 1.32
CIRBP-203ENST00000444172 MBIPQ9NS73 344 aa23.31■■□□□ 1.32
CIRBP-203ENST00000444172 TAF1LQ8IZX4 1826 aa23.31■■□□□ 1.32
CIRBP-203ENST00000444172 HEG1Q9ULI3 1381 aa23.3■■□□□ 1.32
CIRBP-203ENST00000444172 ZNF853P0CG23 659 aa23.3■■□□□ 1.32
CIRBP-203ENST00000444172 EIF4A1P60842 406 aaKnown RBP23.3■■□□□ 1.32
CIRBP-203ENST00000444172 DNAJC10Q8IXB1 793 aa23.3■■□□□ 1.32
CIRBP-203ENST00000444172 C5P01031 1676 aa23.29■■□□□ 1.32
CIRBP-203ENST00000444172 HMGB2P26583 209 aaKnown RBP23.29■■□□□ 1.32
CIRBP-203ENST00000444172 VSIG10Q8N0Z9 540 aa23.29■■□□□ 1.32
CIRBP-203ENST00000444172 LINC00116Q8NCU8 138 aa23.29■■□□□ 1.32
CIRBP-203ENST00000444172 IL16Q14005 1332 aa23.29■■□□□ 1.32
CIRBP-203ENST00000444172 STK32BQ9NY57 414 aa23.28■■□□□ 1.32
CIRBP-203ENST00000444172 SNRPA1P09661 255 aaKnown RBP23.27■■□□□ 1.32
CIRBP-203ENST00000444172 TSR2Q969E8 191 aaKnown RBP23.27■■□□□ 1.32
CIRBP-203ENST00000444172 ZNF831Q5JPB2 1677 aa23.27■■□□□ 1.32
CIRBP-203ENST00000444172 ZNF521Q96K83 1311 aa23.27■■□□□ 1.32
CIRBP-203ENST00000444172 TJP1Q07157 1748 aa23.26■■□□□ 1.31
CIRBP-203ENST00000444172 PRAMEF22A3QJZ6 481 aa23.26■■□□□ 1.31
CIRBP-203ENST00000444172 GOLGA2Q08379 1002 aa23.26■■□□□ 1.31
CIRBP-203ENST00000444172 TEX13AQ9BXU3 409 aaPredicted RBP23.26■■□□□ 1.31
CIRBP-203ENST00000444172 ANO8Q9HCE9 1232 aaPredicted RBP23.26■■□□□ 1.31
CIRBP-203ENST00000444172 AK7Q96M32 723 aa23.25■■□□□ 1.31
CIRBP-203ENST00000444172 SPINK5Q9NQ38 1064 aaPredicted RBP23.25■■□□□ 1.31
CIRBP-203ENST00000444172 USP16Q9Y5T5 823 aa23.25■■□□□ 1.31
CIRBP-203ENST00000444172 GIGYF1O75420 1035 aaPredicted RBP23.24■■□□□ 1.31
CIRBP-203ENST00000444172 SLC15A2Q16348 729 aa23.24■■□□□ 1.31
CIRBP-203ENST00000444172 ZNF827Q17R98 1081 aa23.24■■□□□ 1.31
CIRBP-203ENST00000444172 KRT24Q2M2I5 525 aa23.24■■□□□ 1.31
CIRBP-203ENST00000444172 TFCP2L1Q9NZI6 479 aa23.24■■□□□ 1.31
CIRBP-203ENST00000444172 C4BP0C0L5 1744 aa23.24■■□□□ 1.31
CIRBP-203ENST00000444172 COL5A3P25940 1745 aaPredicted RBP23.23■■□□□ 1.31
CIRBP-203ENST00000444172 STARD3NLO95772 234 aa23.23■■□□□ 1.31
CIRBP-203ENST00000444172 CYP19A1P11511 503 aaPredicted RBP23.23■■□□□ 1.31
CIRBP-203ENST00000444172 AKT1S1Q96B36 256 aa23.23■■□□□ 1.31
CIRBP-203ENST00000444172 CRKLP46109 303 aaKnown RBP23.22■■□□□ 1.31
CIRBP-203ENST00000444172 MYH16Q9H6N6 1097 aa23.22■■□□□ 1.31
CIRBP-203ENST00000444172 ELL2O00472 640 aaPredicted RBP23.21■■□□□ 1.31
CIRBP-203ENST00000444172 R3HDM1Q15032 1099 aaKnown RBP23.21■■□□□ 1.31
CIRBP-203ENST00000444172 CICQ96RK0 1608 aaPredicted RBP23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms