RNA–Protein interactions for RNA: ENST00000443598.6

HNF4A-205, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,603 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-205ENST00000443598 COL24A1Q17RW2 1714 aa28.53■■■□□ 2.16
HNF4A-205ENST00000443598 MTHFSDQ2M296 383 aaKnown RBP28.53■■■□□ 2.16
HNF4A-205ENST00000443598 ZEB1P37275 1124 aaPredicted RBP28.51■■■□□ 2.15
HNF4A-205ENST00000443598 FLAD1Q8NFF5 587 aa28.51■■■□□ 2.15
HNF4A-205ENST00000443598 ADAMTS7Q9UKP4 1686 aa28.51■■■□□ 2.15
HNF4A-205ENST00000443598 ATP6V1AP38606 617 aa28.5■■■□□ 2.15
HNF4A-205ENST00000443598 NFATC2IPQ8NCF5 419 aa28.5■■■□□ 2.15
HNF4A-205ENST00000443598 UBR3Q6ZT12 1888 aa28.49■■■□□ 2.15
HNF4A-205ENST00000443598 COL23A1Q86Y22 540 aaPredicted RBP28.48■■■□□ 2.15
HNF4A-205ENST00000443598 AK7Q96M32 723 aa28.48■■■□□ 2.15
HNF4A-205ENST00000443598 MRC1P22897 1456 aa28.48■■■□□ 2.15
HNF4A-205ENST00000443598 RNMTO43148 476 aaKnown RBP28.47■■■□□ 2.15
HNF4A-205ENST00000443598 ITPK1Q13572 414 aa28.47■■■□□ 2.15
HNF4A-205ENST00000443598 LINC00116Q8NCU8 138 aa28.47■■■□□ 2.15
HNF4A-205ENST00000443598 GAS2L2Q8NHY3 880 aa28.47■■■□□ 2.15
HNF4A-205ENST00000443598 SLC52A2Q9HAB3 445 aa28.47■■■□□ 2.15
HNF4A-205ENST00000443598 RSPH6AQ9H0K4 717 aa28.46■■■□□ 2.15
HNF4A-205ENST00000443598 LGR6Q9HBX8 967 aa28.46■■■□□ 2.15
HNF4A-205ENST00000443598 DDX10Q13206 875 aaKnown RBP28.44■■■□□ 2.14
HNF4A-205ENST00000443598 RBM42Q9BTD8 480 aaKnown RBP28.44■■■□□ 2.14
HNF4A-205ENST00000443598 SLC4A9Q96Q91 983 aa28.43■■■□□ 2.14
HNF4A-205ENST00000443598 ARXQ96QS3 562 aa28.43■■■□□ 2.14
HNF4A-205ENST00000443598 COL5A3P25940 1745 aaPredicted RBP28.43■■■□□ 2.14
HNF4A-205ENST00000443598 FCHSD2O94868 740 aa28.43■■■□□ 2.14
HNF4A-205ENST00000443598 U2AF1L5P0DN76 240 aaPredicted RBP28.43■■■□□ 2.14
HNF4A-205ENST00000443598 SSFA2P28290 1259 aa28.43■■■□□ 2.14
HNF4A-205ENST00000443598 POLD1P28340 1107 aa28.43■■■□□ 2.14
HNF4A-205ENST00000443598 PRKAR2BP31323 418 aa28.43■■■□□ 2.14
HNF4A-205ENST00000443598 U2AF1Q01081 240 aaKnown RBP eCLIP28.43■■■□□ 2.14
HNF4A-205ENST00000443598 RALBP1Q15311 655 aa28.43■■■□□ 2.14
HNF4A-205ENST00000443598 MSH5O43196 834 aa28.42■■■□□ 2.14
HNF4A-205ENST00000443598 MAP3K5Q99683 1374 aa28.42■■■□□ 2.14
HNF4A-205ENST00000443598 CICQ96RK0 1608 aaPredicted RBP28.41■■■□□ 2.14
HNF4A-205ENST00000443598 GNAT3A8MTJ3 354 aa28.4■■■□□ 2.14
HNF4A-205ENST00000443598 RC3H1Q5TC82 1133 aaKnown RBP28.4■■■□□ 2.14
HNF4A-205ENST00000443598 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.38■■■□□ 2.13
HNF4A-205ENST00000443598 PHACTR3Q96KR7 559 aa28.38■■■□□ 2.13
HNF4A-205ENST00000443598 FHDC1Q9C0D6 1143 aaPredicted RBP28.38■■■□□ 2.13
HNF4A-205ENST00000443598 CNTNAP4Q9C0A0 1308 aa28.37■■■□□ 2.13
HNF4A-205ENST00000443598 GNPATO15228 680 aa28.37■■■□□ 2.13
HNF4A-205ENST00000443598 PTCD1O75127 700 aaKnown RBP28.37■■■□□ 2.13
HNF4A-205ENST00000443598 AMIGO3Q86WK7 504 aa28.37■■■□□ 2.13
HNF4A-205ENST00000443598 SYT17Q9BSW7 474 aa28.36■■■□□ 2.13
HNF4A-205ENST00000443598 MYH14Q7Z406 1995 aaKnown RBP28.35■■■□□ 2.13
HNF4A-205ENST00000443598 IL17REQ8NFR9 667 aa28.35■■■□□ 2.13
HNF4A-205ENST00000443598 TJP1Q07157 1748 aa28.34■■■□□ 2.13
HNF4A-205ENST00000443598 PHF14O94880 888 aa28.34■■■□□ 2.13
HNF4A-205ENST00000443598 RTCBQ9Y3I0 505 aaKnown RBP28.33■■■□□ 2.13
HNF4A-205ENST00000443598 SIPA1L3O60292 1781 aaPredicted RBP28.33■■■□□ 2.13
HNF4A-205ENST00000443598 CEMIPQ8WUJ3 1361 aa28.32■■■□□ 2.12
HNF4A-205ENST00000443598 ADRA2BP18089 450 aa28.32■■■□□ 2.12
HNF4A-205ENST00000443598 TEFQ10587 303 aa28.32■■■□□ 2.12
HNF4A-205ENST00000443598 UBR2Q8IWV8 1755 aa28.32■■■□□ 2.12
HNF4A-205ENST00000443598 DCAF8L1A6NGE4 600 aa28.31■■■□□ 2.12
HNF4A-205ENST00000443598 KCPQ6ZWJ8 1503 aa28.31■■■□□ 2.12
HNF4A-205ENST00000443598 RPS6KA4O75676 772 aa28.3■■■□□ 2.12
HNF4A-205ENST00000443598 SLC39A6Q13433 755 aa28.3■■■□□ 2.12
HNF4A-205ENST00000443598 TRAPPC3LQ5T215 181 aa28.29■■■□□ 2.12
HNF4A-205ENST00000443598 MSL1Q68DK7 614 aa28.29■■■□□ 2.12
HNF4A-205ENST00000443598 SMIM5Q71RC9 77 aa28.29■■■□□ 2.12
HNF4A-205ENST00000443598 VSIG10Q8N0Z9 540 aa28.29■■■□□ 2.12
HNF4A-205ENST00000443598 MYBBP1AQ9BQG0 1328 aaKnown RBP28.28■■■□□ 2.12
HNF4A-205ENST00000443598 NEFMP07197 916 aa28.28■■■□□ 2.12
HNF4A-205ENST00000443598 CRKLP46109 303 aaKnown RBP28.28■■■□□ 2.12
HNF4A-205ENST00000443598 HTATSF1O43719 755 aaKnown RBP28.27■■■□□ 2.12
HNF4A-205ENST00000443598 PNNQ9H307 717 aaKnown RBP28.27■■■□□ 2.12
HNF4A-205ENST00000443598 TTC5Q8N0Z6 440 aa28.26■■■□□ 2.11
HNF4A-205ENST00000443598 RTF1Q92541 710 aaKnown RBP28.25■■■□□ 2.11
HNF4A-205ENST00000443598 DNAJC10Q8IXB1 793 aa28.25■■■□□ 2.11
HNF4A-205ENST00000443598 ARHGEF1Q92888 912 aaKnown RBP28.24■■■□□ 2.11
HNF4A-205ENST00000443598 PLEKHF1Q96S99 279 aa28.24■■■□□ 2.11
HNF4A-205ENST00000443598 ZNF790Q6PG37 636 aa28.23■■■□□ 2.11
HNF4A-205ENST00000443598 C4AP0C0L4 1744 aa28.22■■■□□ 2.11
HNF4A-205ENST00000443598 DLG5Q8TDM6 1919 aa28.22■■■□□ 2.11
HNF4A-205ENST00000443598 CYP19A1P11511 503 aaPredicted RBP28.21■■■□□ 2.11
HNF4A-205ENST00000443598 INTS5Q6P9B9 1019 aaKnown RBP28.21■■■□□ 2.11
HNF4A-205ENST00000443598 RFC4P35249 363 aa28.21■■■□□ 2.11
HNF4A-205ENST00000443598 CCDC87Q9NVE4 849 aa28.21■■■□□ 2.11
HNF4A-205ENST00000443598 KLHL34Q8N239 644 aa28.2■■■□□ 2.1
HNF4A-205ENST00000443598 NLGN1Q8N2Q7 840 aa28.19■■■□□ 2.1
HNF4A-205ENST00000443598 PRKRIP1Q9H875 184 aaPredicted RBP28.19■■■□□ 2.1
HNF4A-205ENST00000443598 CD2APQ9Y5K6 639 aa28.19■■■□□ 2.1
HNF4A-205ENST00000443598 BTBD11A6QL63 1104 aa28.18■■■□□ 2.1
HNF4A-205ENST00000443598 MCM10Q7L590 875 aa28.18■■■□□ 2.1
HNF4A-205ENST00000443598 ZNF496Q96IT1 587 aaPredicted RBP28.18■■■□□ 2.1
HNF4A-205ENST00000443598 HEG1Q9ULI3 1381 aa28.18■■■□□ 2.1
HNF4A-205ENST00000443598 TEX13AQ9BXU3 409 aaPredicted RBP28.18■■■□□ 2.1
HNF4A-205ENST00000443598 FMNL2Q96PY5 1086 aa28.17■■■□□ 2.1
HNF4A-205ENST00000443598 MAPK8IP3Q9UPT6 1336 aa28.16■■■□□ 2.1
HNF4A-205ENST00000443598 SOS1Q07889 1333 aaPredicted RBP28.15■■■□□ 2.1
HNF4A-205ENST00000443598 STARD3NLO95772 234 aa28.15■■■□□ 2.1
HNF4A-205ENST00000443598 GYS1P13807 737 aa28.15■■■□□ 2.1
HNF4A-205ENST00000443598 NFE2L2Q16236 605 aa28.15■■■□□ 2.1
HNF4A-205ENST00000443598 NLGN2Q8NFZ4 835 aa28.14■■■□□ 2.1
HNF4A-205ENST00000443598 USP42Q9H9J4 1324 aaKnown RBP28.13■■■□□ 2.09
HNF4A-205ENST00000443598 MMP10P09238 476 aa28.13■■■□□ 2.09
HNF4A-205ENST00000443598 DCTN1Q14203 1278 aa28.13■■■□□ 2.09
HNF4A-205ENST00000443598 ZBTB1Q9Y2K1 713 aa28.12■■■□□ 2.09
HNF4A-205ENST00000443598 TAF7Q15545 349 aaPredicted RBP28.11■■■□□ 2.09
HNF4A-205ENST00000443598 KCNQ3O43525 872 aa28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms