RNA–Protein interactions for RNA: ENST00000443423.1

NEFMP1-201, Transcript of neurofilament medium pseudogene 1, humanhuman

BASIC

Gene NEFMP1, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP1-201ENST00000443423 NBPF20Q3BBV1 942 aa5.91□□□□□ -1.46
NEFMP1-201ENST00000443423 KANK4Q5T7N3 995 aaPredicted RBP5.91□□□□□ -1.46
NEFMP1-201ENST00000443423 USP17L2Q6R6M4 530 aa5.91□□□□□ -1.46
NEFMP1-201ENST00000443423 USP17L1Q7RTZ2 530 aa5.91□□□□□ -1.46
NEFMP1-201ENST00000443423 DCAF5Q96JK2 942 aa5.91□□□□□ -1.46
NEFMP1-201ENST00000443423 ZNF395Q9H8N7 513 aaPredicted RBP5.91□□□□□ -1.46
NEFMP1-201ENST00000443423 VRTNQ9H8Y1 702 aa5.91□□□□□ -1.46
NEFMP1-201ENST00000443423 CNTNAP5Q8WYK1 1306 aa5.91□□□□□ -1.46
NEFMP1-201ENST00000443423 RNF20Q5VTR2 975 aa5.9□□□□□ -1.46
NEFMP1-201ENST00000443423 CCDC125Q86Z20 511 aa5.9□□□□□ -1.46
NEFMP1-201ENST00000443423 SEPT12Q8IYM1 358 aa5.9□□□□□ -1.46
NEFMP1-201ENST00000443423 PLPP7Q8NBV4 271 aa5.9□□□□□ -1.46
NEFMP1-201ENST00000443423 TMPRSS4Q9NRS4 437 aa5.9□□□□□ -1.46
NEFMP1-201ENST00000443423 USTQ9Y2C2 406 aa5.9□□□□□ -1.46
NEFMP1-201ENST00000443423 ESPNB1AK53 854 aa5.89□□□□□ -1.47
NEFMP1-201ENST00000443423 GIGYF1O75420 1035 aaPredicted RBP5.89□□□□□ -1.47
NEFMP1-201ENST00000443423 MARSP56192 900 aaKnown RBP5.89□□□□□ -1.47
NEFMP1-201ENST00000443423 SCARF2Q96GP6 870 aaPredicted RBP5.89□□□□□ -1.47
NEFMP1-201ENST00000443423 KRTAP9-2Q9BYQ4 174 aa5.89□□□□□ -1.47
NEFMP1-201ENST00000443423 PGPEP1Q9NXJ5 209 aa5.89□□□□□ -1.47
NEFMP1-201ENST00000443423 CSB-PGBD3P0DP91 1061 aa5.88□□□□□ -1.47
NEFMP1-201ENST00000443423 NCOA4Q13772 614 aa5.88□□□□□ -1.47
NEFMP1-201ENST00000443423 ELOAQ14241 798 aaKnown RBP5.88□□□□□ -1.47
NEFMP1-201ENST00000443423 EML3Q32P44 896 aa5.88□□□□□ -1.47
NEFMP1-201ENST00000443423 DEPDC4Q8N2C3 294 aa5.88□□□□□ -1.47
NEFMP1-201ENST00000443423 ZNF784Q8NCA9 323 aaPredicted RBP5.88□□□□□ -1.47
NEFMP1-201ENST00000443423 FAM196BA6NMK8 535 aa5.87□□□□□ -1.47
NEFMP1-201ENST00000443423 ATP5J2-PTCD1G3V325 749 aa5.87□□□□□ -1.47
NEFMP1-201ENST00000443423 CDCA8Q53HL2 280 aa5.87□□□□□ -1.47
NEFMP1-201ENST00000443423 CCDC85AQ96PX6 553 aaPredicted RBP5.87□□□□□ -1.47
NEFMP1-201ENST00000443423 MKRN1Q9UHC7 482 aaKnown RBP5.87□□□□□ -1.47
NEFMP1-201ENST00000443423 DOLKQ9UPQ8 538 aa5.87□□□□□ -1.47
NEFMP1-201ENST00000443423 KRTAP9-6A0A140TA67 174 aa5.86□□□□□ -1.47
NEFMP1-201ENST00000443423 MSTNO14793 375 aa5.86□□□□□ -1.47
NEFMP1-201ENST00000443423 TSGA10IPQ3SY00 556 aa5.86□□□□□ -1.47
NEFMP1-201ENST00000443423 ACDQ96AP0 544 aa5.86□□□□□ -1.47
NEFMP1-201ENST00000443423 ZNF837Q96EG3 531 aaPredicted RBP5.86□□□□□ -1.47
NEFMP1-201ENST00000443423 POLMQ9NP87 494 aaPredicted RBP5.86□□□□□ -1.47
NEFMP1-201ENST00000443423 GPR25O00155 361 aa5.85□□□□□ -1.47
NEFMP1-201ENST00000443423 ADH1AP07327 375 aa5.85□□□□□ -1.47
NEFMP1-201ENST00000443423 PTK7Q13308 1070 aa5.85□□□□□ -1.47
NEFMP1-201ENST00000443423 DBN1Q16643 649 aa5.85□□□□□ -1.47
NEFMP1-201ENST00000443423 LARP1Q6PKG0 1096 aaKnown RBP5.85□□□□□ -1.47
NEFMP1-201ENST00000443423 TRIM50Q86XT4 487 aa5.85□□□□□ -1.47
NEFMP1-201ENST00000443423 NOD1Q9Y239 953 aa5.85□□□□□ -1.47
NEFMP1-201ENST00000443423 TMEM88BA6NKF7 163 aa5.84□□□□□ -1.47
NEFMP1-201ENST00000443423 USP17L15C9J2P7 530 aa5.84□□□□□ -1.47
NEFMP1-201ENST00000443423 USP17L10C9JJH3 530 aa5.84□□□□□ -1.47
NEFMP1-201ENST00000443423 USP17L13C9JLJ4 530 aa5.84□□□□□ -1.47
NEFMP1-201ENST00000443423 USP17L12C9JPN9 530 aa5.84□□□□□ -1.47
NEFMP1-201ENST00000443423 USP17L11C9JVI0 530 aa5.84□□□□□ -1.47
NEFMP1-201ENST00000443423 USP17L21D6R901 530 aa5.84□□□□□ -1.47
NEFMP1-201ENST00000443423 USP17L18D6R9N7 530 aa5.84□□□□□ -1.47
NEFMP1-201ENST00000443423 USP17L22D6RA61 530 aa5.84□□□□□ -1.47
NEFMP1-201ENST00000443423 USP17L17D6RBQ6 530 aa5.84□□□□□ -1.47
NEFMP1-201ENST00000443423 USP17L19D6RCP7 530 aa5.84□□□□□ -1.47
NEFMP1-201ENST00000443423 USP17L20D6RJB6 530 aa5.84□□□□□ -1.47
NEFMP1-201ENST00000443423 ERVH48-1M5A8F1 160 aa5.84□□□□□ -1.47
NEFMP1-201ENST00000443423 RASA1P20936 1047 aa5.84□□□□□ -1.47
NEFMP1-201ENST00000443423 PTGIRP43119 386 aa5.84□□□□□ -1.47
NEFMP1-201ENST00000443423 ATP1A2P50993 1020 aa5.84□□□□□ -1.47
NEFMP1-201ENST00000443423 USP17L24Q0WX57 530 aa5.84□□□□□ -1.47
NEFMP1-201ENST00000443423 TRIM26Q12899 539 aaPredicted RBP5.84□□□□□ -1.47
NEFMP1-201ENST00000443423 USP4Q13107 963 aa5.84□□□□□ -1.47
NEFMP1-201ENST00000443423 CRTC2Q53ET0 693 aaPredicted RBP5.84□□□□□ -1.47
NEFMP1-201ENST00000443423 SIRT1Q96EB6 747 aa5.84□□□□□ -1.47
NEFMP1-201ENST00000443423 IGF1RP08069 1367 aa5.83□□□□□ -1.48
NEFMP1-201ENST00000443423 THBS1P07996 1170 aa5.83□□□□□ -1.48
NEFMP1-201ENST00000443423 RHOQP17081 205 aa5.83□□□□□ -1.48
NEFMP1-201ENST00000443423 DHX9Q08211 1270 aaKnown RBP5.83□□□□□ -1.48
NEFMP1-201ENST00000443423 OXLD1Q5BKU9 147 aa5.83□□□□□ -1.48
NEFMP1-201ENST00000443423 LARGE2Q8N3Y3 721 aa5.83□□□□□ -1.48
NEFMP1-201ENST00000443423 OGFOD1Q8N543 542 aa5.83□□□□□ -1.48
NEFMP1-201ENST00000443423 TRIM52Q96A61 297 aa5.83□□□□□ -1.48
NEFMP1-201ENST00000443423 MBIPQ9NS73 344 aa5.83□□□□□ -1.48
NEFMP1-201ENST00000443423 ZMIZ1Q9ULJ6 1067 aa5.83□□□□□ -1.48
NEFMP1-201ENST00000443423 NOVA2Q9UNW9 492 aaKnown RBP5.83□□□□□ -1.48
NEFMP1-201ENST00000443423 PCDHB11Q9Y5F2 797 aa5.83□□□□□ -1.48
NEFMP1-201ENST00000443423 ZBTB7CA1YPR0 619 aa5.82□□□□□ -1.48
NEFMP1-201ENST00000443423 KRBA1A5PL33 1030 aa5.82□□□□□ -1.48
NEFMP1-201ENST00000443423 BRD1O95696 1058 aa5.82□□□□□ -1.48
NEFMP1-201ENST00000443423 ITGB7P26010 798 aa5.82□□□□□ -1.48
NEFMP1-201ENST00000443423 SNRPNP63162 240 aaKnown RBP5.82□□□□□ -1.48
NEFMP1-201ENST00000443423 GTF2IP78347 998 aa5.82□□□□□ -1.48
NEFMP1-201ENST00000443423 CLDN10P78369 228 aa5.82□□□□□ -1.48
NEFMP1-201ENST00000443423 TMEM164Q5U3C3 297 aa5.82□□□□□ -1.48
NEFMP1-201ENST00000443423 TRIM22Q8IYM9 498 aa5.82□□□□□ -1.48
NEFMP1-201ENST00000443423 SIX5Q8N196 739 aa5.82□□□□□ -1.48
NEFMP1-201ENST00000443423 STK32AQ8WU08 396 aa5.82□□□□□ -1.48
NEFMP1-201ENST00000443423 CDCA7Q9BWT1 371 aaPredicted RBP5.82□□□□□ -1.48
NEFMP1-201ENST00000443423 DNAAF2Q9NVR5 837 aaKnown RBP5.82□□□□□ -1.48
NEFMP1-201ENST00000443423 PATL2C9JE40 543 aaKnown RBP5.81□□□□□ -1.48
NEFMP1-201ENST00000443423 BCRP11274 1271 aa5.81□□□□□ -1.48
NEFMP1-201ENST00000443423 HOXB4P17483 251 aaPredicted RBP5.81□□□□□ -1.48
NEFMP1-201ENST00000443423 RNF144AP50876 292 aaPredicted RBP5.81□□□□□ -1.48
NEFMP1-201ENST00000443423 C1orf229Q6ZS94 237 aaPredicted RBP5.81□□□□□ -1.48
NEFMP1-201ENST00000443423 LYSMD3Q7Z3D4 306 aa5.81□□□□□ -1.48
NEFMP1-201ENST00000443423 PRICKLE2Q7Z3G6 844 aa5.81□□□□□ -1.48
NEFMP1-201ENST00000443423 ANKMY2Q8IV38 441 aa5.81□□□□□ -1.48
NEFMP1-201ENST00000443423 FAM200AQ8TCP9 573 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms