RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 KCNQ3O43525 872 aa12.89□□□□□ -0.35
CALD1-210ENST00000443197 MX1P20591 662 aa12.89□□□□□ -0.35
CALD1-210ENST00000443197 ATP7BP35670 1465 aa12.89□□□□□ -0.35
CALD1-210ENST00000443197 CWC27Q6UX04 472 aaKnown RBP12.89□□□□□ -0.35
CALD1-210ENST00000443197 TBC1D9Q6ZT07 1266 aa12.89□□□□□ -0.35
CALD1-210ENST00000443197 FAM135BQ49AJ0 1406 aa12.89□□□□□ -0.35
CALD1-210ENST00000443197 ZKSCAN1P17029 563 aaPredicted RBP12.88□□□□□ -0.35
CALD1-210ENST00000443197 TOMM22Q9NS69 142 aa12.88□□□□□ -0.35
CALD1-210ENST00000443197 CWF19L2Q2TBE0 894 aaKnown RBP12.88□□□□□ -0.35
CALD1-210ENST00000443197 SMC5Q8IY18 1101 aa12.88□□□□□ -0.35
CALD1-210ENST00000443197 ANKRD44Q8N8A2 993 aa12.88□□□□□ -0.35
CALD1-210ENST00000443197 CCDC8Q9H0W5 538 aaPredicted RBP12.88□□□□□ -0.35
CALD1-210ENST00000443197 DIP2BQ9P265 1576 aa12.88□□□□□ -0.35
CALD1-210ENST00000443197 DDX49Q9Y6V7 483 aaKnown RBP12.88□□□□□ -0.35
CALD1-210ENST00000443197 PIK3C2BO00750 1634 aa12.87□□□□□ -0.35
CALD1-210ENST00000443197 PTPRMP28827 1452 aa12.87□□□□□ -0.35
CALD1-210ENST00000443197 MEX3CQ5U5Q3 659 aaKnown RBP12.87□□□□□ -0.35
CALD1-210ENST00000443197 COPS6Q7L5N1 327 aa12.87□□□□□ -0.35
CALD1-210ENST00000443197 TMOD3Q9NYL9 352 aa12.87□□□□□ -0.35
CALD1-210ENST00000443197 OTUD7AQ8TE49 926 aaPredicted RBP12.87□□□□□ -0.35
CALD1-210ENST00000443197 TBC1D2Q9BYX2 928 aa12.87□□□□□ -0.35
CALD1-210ENST00000443197 VWDEQ8N2E2 1590 aa12.87□□□□□ -0.35
CALD1-210ENST00000443197 HTATSF1O43719 755 aaKnown RBP12.87□□□□□ -0.35
CALD1-210ENST00000443197 CEP85Q6P2H3 762 aa12.87□□□□□ -0.35
CALD1-210ENST00000443197 LARP1Q6PKG0 1096 aaKnown RBP12.87□□□□□ -0.35
CALD1-210ENST00000443197 FMNL2Q96PY5 1086 aa12.87□□□□□ -0.35
CALD1-210ENST00000443197 AATKQ6ZMQ8 1374 aa12.86□□□□□ -0.35
CALD1-210ENST00000443197 SETBP1Q9Y6X0 1596 aa12.86□□□□□ -0.35
CALD1-210ENST00000443197 RNMTO43148 476 aaKnown RBP12.86□□□□□ -0.35
CALD1-210ENST00000443197 PTMAP06454 111 aaKnown RBP12.86□□□□□ -0.35
CALD1-210ENST00000443197 XAGE3Q8WTP9 111 aa12.86□□□□□ -0.35
CALD1-210ENST00000443197 PIK3R4Q99570 1358 aa12.86□□□□□ -0.35
CALD1-210ENST00000443197 A0A087WZG4 1122 aa12.86□□□□□ -0.35
CALD1-210ENST00000443197 BMP2KLQ5H9B9 411 aa12.86□□□□□ -0.35
CALD1-210ENST00000443197 KIF6Q6ZMV9 814 aa12.86□□□□□ -0.35
CALD1-210ENST00000443197 UBE3BQ7Z3V4 1068 aa12.86□□□□□ -0.35
CALD1-210ENST00000443197 UPF3BQ9BZI7 483 aaKnown RBP12.86□□□□□ -0.35
CALD1-210ENST00000443197 HYPKQ9NX55 129 aa12.86□□□□□ -0.35
CALD1-210ENST00000443197 MROH1Q8NDA8 1641 aa12.86□□□□□ -0.35
CALD1-210ENST00000443197 MROH2AA6NES4 1674 aa12.86□□□□□ -0.35
CALD1-210ENST00000443197 KIF1BPQ96EK5 621 aa12.85□□□□□ -0.35
CALD1-210ENST00000443197 APPP05067 770 aa12.85□□□□□ -0.35
CALD1-210ENST00000443197 ADGRB1O14514 1584 aa12.85□□□□□ -0.35
CALD1-210ENST00000443197 ZCRB1Q8TBF4 217 aaKnown RBP12.85□□□□□ -0.35
CALD1-210ENST00000443197 BOLA2Q9H3K6 86 aa12.85□□□□□ -0.35
CALD1-210ENST00000443197 TMEM94Q12767 1356 aa12.85□□□□□ -0.35
CALD1-210ENST00000443197 LAMC1P11047 1609 aa12.84□□□□□ -0.35
CALD1-210ENST00000443197 GOLGA6L3A6NEY3 463 aa12.84□□□□□ -0.35
CALD1-210ENST00000443197 WASHC4Q2M389 1173 aa12.84□□□□□ -0.35
CALD1-210ENST00000443197 TBC1D32Q96NH3 1257 aa12.84□□□□□ -0.35
CALD1-210ENST00000443197 PA2G4Q9UQ80 394 aaKnown RBP12.84□□□□□ -0.35
CALD1-210ENST00000443197 SETD1BQ9UPS6 1966 aaKnown RBP12.84□□□□□ -0.35
CALD1-210ENST00000443197 USP19O94966 1318 aa12.84□□□□□ -0.35
CALD1-210ENST00000443197 SDSP20132 328 aa12.84□□□□□ -0.35
CALD1-210ENST00000443197 DEPDC5O75140 1603 aa12.84□□□□□ -0.35
CALD1-210ENST00000443197 ARHGEF40Q8TER5 1519 aa12.84□□□□□ -0.35
CALD1-210ENST00000443197 GPTP24298 496 aa12.84□□□□□ -0.35
CALD1-210ENST00000443197 ANKRD13DQ6ZTN6 518 aa12.84□□□□□ -0.35
CALD1-210ENST00000443197 ERC1Q8IUD2 1116 aa12.84□□□□□ -0.35
CALD1-210ENST00000443197 DCTPP1Q9H773 170 aa12.84□□□□□ -0.35
CALD1-210ENST00000443197 SNRPA1P09661 255 aaKnown RBP12.83□□□□□ -0.36
CALD1-210ENST00000443197 RABEP1Q15276 862 aa12.83□□□□□ -0.36
CALD1-210ENST00000443197 NRXN1Q9ULB1 1477 aa12.83□□□□□ -0.36
CALD1-210ENST00000443197 IQGAP1P46940 1657 aa12.83□□□□□ -0.36
CALD1-210ENST00000443197 MCTP1Q6DN14 999 aa12.83□□□□□ -0.36
CALD1-210ENST00000443197 SLAIN2Q9P270 581 aa12.83□□□□□ -0.36
CALD1-210ENST00000443197 DDX11L8A8MPP1 907 aa12.82□□□□□ -0.36
CALD1-210ENST00000443197 TTC22Q5TAA0 569 aa12.82□□□□□ -0.36
CALD1-210ENST00000443197 FOSBP53539 338 aa12.82□□□□□ -0.36
CALD1-210ENST00000443197 L1TD1Q5T7N2 865 aaKnown RBP12.82□□□□□ -0.36
CALD1-210ENST00000443197 NPHP4O75161 1426 aaPredicted RBP12.82□□□□□ -0.36
CALD1-210ENST00000443197 K7ELQ4 463 aaPredicted RBP12.82□□□□□ -0.36
CALD1-210ENST00000443197 CCDC57Q2TAC2 916 aa12.82□□□□□ -0.36
CALD1-210ENST00000443197 LARP6Q9BRS8 491 aaKnown RBP12.82□□□□□ -0.36
CALD1-210ENST00000443197 PHF23Q9BUL5 403 aaPredicted RBP12.82□□□□□ -0.36
CALD1-210ENST00000443197 EXOC5O00471 708 aa12.81□□□□□ -0.36
CALD1-210ENST00000443197 AEBP2Q6ZN18 517 aaPredicted RBP12.81□□□□□ -0.36
CALD1-210ENST00000443197 VPS37CA5D8V6 355 aaPredicted RBP12.81□□□□□ -0.36
CALD1-210ENST00000443197 FKBP4Q02790 459 aaKnown RBP eCLIP12.81□□□□□ -0.36
CALD1-210ENST00000443197 ZRSR1Q15695 479 aaKnown RBP12.81□□□□□ -0.36
CALD1-210ENST00000443197 NCBP3Q53F19 620 aaKnown RBP12.81□□□□□ -0.36
CALD1-210ENST00000443197 CNNM1Q9NRU3 951 aa12.81□□□□□ -0.36
CALD1-210ENST00000443197 POLR1AO95602 1720 aaPredicted RBP12.81□□□□□ -0.36
CALD1-210ENST00000443197 PDE1AP54750 535 aa12.81□□□□□ -0.36
CALD1-210ENST00000443197 ATP8B2P98198 1209 aa12.81□□□□□ -0.36
CALD1-210ENST00000443197 RHPN1Q8TCX5 695 aa12.81□□□□□ -0.36
CALD1-210ENST00000443197 IGSF1Q8N6C5 1336 aa12.81□□□□□ -0.36
CALD1-210ENST00000443197 PNMA6EA0A0J9YXQ4 647 aa12.81□□□□□ -0.36
CALD1-210ENST00000443197 NBPF7P0C2Y1 421 aaPredicted RBP12.81□□□□□ -0.36
CALD1-210ENST00000443197 KSR2Q6VAB6 950 aa12.81□□□□□ -0.36
CALD1-210ENST00000443197 PLEKHM2Q8IWE5 1019 aa12.81□□□□□ -0.36
CALD1-210ENST00000443197 ARHGEF10O15013 1369 aa12.8□□□□□ -0.36
CALD1-210ENST00000443197 STARD3NLO95772 234 aa12.8□□□□□ -0.36
CALD1-210ENST00000443197 RNF20Q5VTR2 975 aa12.8□□□□□ -0.36
CALD1-210ENST00000443197 ZNF790Q6PG37 636 aa12.8□□□□□ -0.36
CALD1-210ENST00000443197 BICDL1Q6ZP65 573 aa12.8□□□□□ -0.36
CALD1-210ENST00000443197 GNL2Q13823 731 aaKnown RBP12.8□□□□□ -0.36
CALD1-210ENST00000443197 ARHGEF25Q86VW2 580 aa12.8□□□□□ -0.36
CALD1-210ENST00000443197 BTG4Q9NY30 223 aa12.8□□□□□ -0.36
CALD1-210ENST00000443197 ZNF853P0CG23 659 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms