RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 ITPK1Q13572 414 aa29.75■■■□□ 2.35
HDLBP-220ENST00000442730 MTHFSDQ2M296 383 aaKnown RBP29.75■■■□□ 2.35
HDLBP-220ENST00000442730 LINC00116Q8NCU8 138 aa29.75■■■□□ 2.35
HDLBP-220ENST00000442730 ZNF831Q5JPB2 1677 aa29.75■■■□□ 2.35
HDLBP-220ENST00000442730 COL23A1Q86Y22 540 aaPredicted RBP29.73■■■□□ 2.35
HDLBP-220ENST00000442730 ATP6V1AP38606 617 aa29.72■■■□□ 2.35
HDLBP-220ENST00000442730 AK7Q96M32 723 aa29.72■■■□□ 2.35
HDLBP-220ENST00000442730 UBR3Q6ZT12 1888 aa29.72■■■□□ 2.35
HDLBP-220ENST00000442730 ZEB1P37275 1124 aaPredicted RBP29.71■■■□□ 2.35
HDLBP-220ENST00000442730 AMIGO3Q86WK7 504 aa29.71■■■□□ 2.35
HDLBP-220ENST00000442730 NFATC2IPQ8NCF5 419 aa29.71■■■□□ 2.35
HDLBP-220ENST00000442730 SLC4A9Q96Q91 983 aa29.7■■■□□ 2.35
HDLBP-220ENST00000442730 LGR6Q9HBX8 967 aa29.69■■■□□ 2.34
HDLBP-220ENST00000442730 RNMTO43148 476 aaKnown RBP29.68■■■□□ 2.34
HDLBP-220ENST00000442730 ARXQ96QS3 562 aa29.68■■■□□ 2.34
HDLBP-220ENST00000442730 RSPH6AQ9H0K4 717 aa29.68■■■□□ 2.34
HDLBP-220ENST00000442730 SLC52A2Q9HAB3 445 aa29.68■■■□□ 2.34
HDLBP-220ENST00000442730 NUDCQ9Y266 331 aa29.68■■■□□ 2.34
HDLBP-220ENST00000442730 COL5A3P25940 1745 aaPredicted RBP29.68■■■□□ 2.34
HDLBP-220ENST00000442730 MSH5O43196 834 aa29.67■■■□□ 2.34
HDLBP-220ENST00000442730 FLAD1Q8NFF5 587 aa29.67■■■□□ 2.34
HDLBP-220ENST00000442730 RBM42Q9BTD8 480 aaKnown RBP29.67■■■□□ 2.34
HDLBP-220ENST00000442730 VIRMAQ69YN4 1812 aaKnown RBP29.66■■■□□ 2.34
HDLBP-220ENST00000442730 FHDC1Q9C0D6 1143 aaPredicted RBP29.66■■■□□ 2.34
HDLBP-220ENST00000442730 CICQ96RK0 1608 aaPredicted RBP29.66■■■□□ 2.34
HDLBP-220ENST00000442730 MAP3K5Q99683 1374 aa29.65■■■□□ 2.34
HDLBP-220ENST00000442730 PRKAR2BP31323 418 aa29.65■■■□□ 2.34
HDLBP-220ENST00000442730 GAS2L2Q8NHY3 880 aa29.65■■■□□ 2.34
HDLBP-220ENST00000442730 POLD1P28340 1107 aa29.64■■■□□ 2.34
HDLBP-220ENST00000442730 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.63■■■□□ 2.33
HDLBP-220ENST00000442730 PHF14O94880 888 aa29.63■■■□□ 2.33
HDLBP-220ENST00000442730 U2AF1L5P0DN76 240 aaPredicted RBP29.63■■■□□ 2.33
HDLBP-220ENST00000442730 SSFA2P28290 1259 aa29.63■■■□□ 2.33
HDLBP-220ENST00000442730 U2AF1Q01081 240 aaKnown RBP eCLIP29.63■■■□□ 2.33
HDLBP-220ENST00000442730 DDX10Q13206 875 aaKnown RBP29.63■■■□□ 2.33
HDLBP-220ENST00000442730 SMIM5Q71RC9 77 aa29.63■■■□□ 2.33
HDLBP-220ENST00000442730 PHACTR3Q96KR7 559 aa29.63■■■□□ 2.33
HDLBP-220ENST00000442730 TJP1Q07157 1748 aa29.62■■■□□ 2.33
HDLBP-220ENST00000442730 GNPATO15228 680 aa29.62■■■□□ 2.33
HDLBP-220ENST00000442730 PTCD1O75127 700 aaKnown RBP29.62■■■□□ 2.33
HDLBP-220ENST00000442730 MSL1Q68DK7 614 aa29.61■■■□□ 2.33
HDLBP-220ENST00000442730 SYT17Q9BSW7 474 aa29.6■■■□□ 2.33
HDLBP-220ENST00000442730 GNAT3A8MTJ3 354 aa29.59■■■□□ 2.33
HDLBP-220ENST00000442730 CNTNAP4Q9C0A0 1308 aa29.59■■■□□ 2.33
HDLBP-220ENST00000442730 KCPQ6ZWJ8 1503 aa29.59■■■□□ 2.33
HDLBP-220ENST00000442730 FCHSD2O94868 740 aa29.58■■■□□ 2.33
HDLBP-220ENST00000442730 RALBP1Q15311 655 aa29.56■■■□□ 2.32
HDLBP-220ENST00000442730 RC3H1Q5TC82 1133 aaKnown RBP29.56■■■□□ 2.32
HDLBP-220ENST00000442730 IL17REQ8NFR9 667 aa29.56■■■□□ 2.32
HDLBP-220ENST00000442730 UBR2Q8IWV8 1755 aa29.55■■■□□ 2.32
HDLBP-220ENST00000442730 SLC39A6Q13433 755 aa29.55■■■□□ 2.32
HDLBP-220ENST00000442730 SIPA1L3O60292 1781 aaPredicted RBP29.54■■■□□ 2.32
HDLBP-220ENST00000442730 CEMIPQ8WUJ3 1361 aa29.54■■■□□ 2.32
HDLBP-220ENST00000442730 RTCBQ9Y3I0 505 aaKnown RBP29.53■■■□□ 2.32
HDLBP-220ENST00000442730 MYH14Q7Z406 1995 aaKnown RBP29.53■■■□□ 2.32
HDLBP-220ENST00000442730 CRKLP46109 303 aaKnown RBP29.5■■■□□ 2.31
HDLBP-220ENST00000442730 TEFQ10587 303 aa29.5■■■□□ 2.31
HDLBP-220ENST00000442730 KLHL34Q8N239 644 aa29.5■■■□□ 2.31
HDLBP-220ENST00000442730 C4AP0C0L4 1744 aa29.49■■■□□ 2.31
HDLBP-220ENST00000442730 RPS6KA4O75676 772 aa29.49■■■□□ 2.31
HDLBP-220ENST00000442730 ADRA2BP18089 450 aa29.49■■■□□ 2.31
HDLBP-220ENST00000442730 DNAJC10Q8IXB1 793 aa29.49■■■□□ 2.31
HDLBP-220ENST00000442730 TRAPPC3LQ5T215 181 aa29.48■■■□□ 2.31
HDLBP-220ENST00000442730 MYBBP1AQ9BQG0 1328 aaKnown RBP29.46■■■□□ 2.31
HDLBP-220ENST00000442730 DCAF8L1A6NGE4 600 aa29.46■■■□□ 2.31
HDLBP-220ENST00000442730 INTS5Q6P9B9 1019 aaKnown RBP29.45■■■□□ 2.31
HDLBP-220ENST00000442730 TTC5Q8N0Z6 440 aa29.45■■■□□ 2.31
HDLBP-220ENST00000442730 ARHGEF1Q92888 912 aaKnown RBP29.45■■■□□ 2.31
HDLBP-220ENST00000442730 UTRNP46939 3433 aa29.44■■■□□ 2.3
HDLBP-220ENST00000442730 VSIG10Q8N0Z9 540 aa29.44■■■□□ 2.3
HDLBP-220ENST00000442730 NLGN2Q8NFZ4 835 aa29.44■■■□□ 2.3
HDLBP-220ENST00000442730 ZNF790Q6PG37 636 aa29.43■■■□□ 2.3
HDLBP-220ENST00000442730 PLEKHF1Q96S99 279 aa29.43■■■□□ 2.3
HDLBP-220ENST00000442730 CCDC87Q9NVE4 849 aa29.43■■■□□ 2.3
HDLBP-220ENST00000442730 CYP19A1P11511 503 aaPredicted RBP29.42■■■□□ 2.3
HDLBP-220ENST00000442730 MCM10Q7L590 875 aa29.42■■■□□ 2.3
HDLBP-220ENST00000442730 RTF1Q92541 710 aaKnown RBP29.42■■■□□ 2.3
HDLBP-220ENST00000442730 ZNF496Q96IT1 587 aaPredicted RBP29.41■■■□□ 2.3
HDLBP-220ENST00000442730 HTATSF1O43719 755 aaKnown RBP29.4■■■□□ 2.3
HDLBP-220ENST00000442730 RFC4P35249 363 aa29.4■■■□□ 2.3
HDLBP-220ENST00000442730 HEG1Q9ULI3 1381 aa29.39■■■□□ 2.3
HDLBP-220ENST00000442730 GYS1P13807 737 aa29.39■■■□□ 2.3
HDLBP-220ENST00000442730 CD2APQ9Y5K6 639 aa29.39■■■□□ 2.3
HDLBP-220ENST00000442730 SOS1Q07889 1333 aaPredicted RBP29.39■■■□□ 2.3
HDLBP-220ENST00000442730 MMP10P09238 476 aa29.38■■■□□ 2.29
HDLBP-220ENST00000442730 DCTN1Q14203 1278 aa29.38■■■□□ 2.29
HDLBP-220ENST00000442730 GOLGB1Q14789 3259 aaKnown RBP29.37■■■□□ 2.29
HDLBP-220ENST00000442730 BTBD11A6QL63 1104 aa29.37■■■□□ 2.29
HDLBP-220ENST00000442730 NEFMP07197 916 aa29.37■■■□□ 2.29
HDLBP-220ENST00000442730 USP42Q9H9J4 1324 aaKnown RBP29.37■■■□□ 2.29
HDLBP-220ENST00000442730 NLGN1Q8N2Q7 840 aa29.36■■■□□ 2.29
HDLBP-220ENST00000442730 ZBTB1Q9Y2K1 713 aa29.36■■■□□ 2.29
HDLBP-220ENST00000442730 DLG5Q8TDM6 1919 aa29.35■■■□□ 2.29
HDLBP-220ENST00000442730 KCNQ3O43525 872 aa29.35■■■□□ 2.29
HDLBP-220ENST00000442730 PRKRIP1Q9H875 184 aaPredicted RBP29.35■■■□□ 2.29
HDLBP-220ENST00000442730 SRP68Q9UHB9 627 aaKnown RBP29.35■■■□□ 2.29
HDLBP-220ENST00000442730 NFE2L2Q16236 605 aa29.34■■■□□ 2.29
HDLBP-220ENST00000442730 FMNL2Q96PY5 1086 aa29.34■■■□□ 2.29
HDLBP-220ENST00000442730 PNNQ9H307 717 aaKnown RBP29.34■■■□□ 2.29
HDLBP-220ENST00000442730 MAPK8IP3Q9UPT6 1336 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms