RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 FLIIQ13045 1269 aa20.21■□□□□ 0.83
SEMA3B-207ENST00000441915 ZMYND15Q9H091 742 aa20.21■□□□□ 0.83
SEMA3B-207ENST00000441915 LRRCC1Q9C099 1032 aa20.21■□□□□ 0.83
SEMA3B-207ENST00000441915 ESPNB1AK53 854 aa20.2■□□□□ 0.82
SEMA3B-207ENST00000441915 CEP170BQ9Y4F5 1589 aaPredicted RBP20.2■□□□□ 0.82
SEMA3B-207ENST00000441915 GNAT3A8MTJ3 354 aa20.19■□□□□ 0.82
SEMA3B-207ENST00000441915 PKP1Q13835 747 aa20.19■□□□□ 0.82
SEMA3B-207ENST00000441915 VSIG10Q8N0Z9 540 aa20.19■□□□□ 0.82
SEMA3B-207ENST00000441915 ZGPATQ8N5A5 531 aaKnown RBP20.19■□□□□ 0.82
SEMA3B-207ENST00000441915 NASPP49321 788 aaPredicted RBP20.18■□□□□ 0.82
SEMA3B-207ENST00000441915 ANP32BQ92688 251 aaKnown RBP20.18■□□□□ 0.82
SEMA3B-207ENST00000441915 MX1P20591 662 aa20.18■□□□□ 0.82
SEMA3B-207ENST00000441915 NLRP6P59044 892 aa20.18■□□□□ 0.82
SEMA3B-207ENST00000441915 LMBRD1Q9NUN5 540 aa20.18■□□□□ 0.82
SEMA3B-207ENST00000441915 TBX22Q9Y458 520 aa20.18■□□□□ 0.82
SEMA3B-207ENST00000441915 SALL3Q9BXA9 1300 aa20.18■□□□□ 0.82
SEMA3B-207ENST00000441915 KIF13AQ9H1H9 1805 aa20.17■□□□□ 0.82
SEMA3B-207ENST00000441915 ATP8B2P98198 1209 aa20.17■□□□□ 0.82
SEMA3B-207ENST00000441915 NCLP19338 710 aaKnown RBP20.17■□□□□ 0.82
SEMA3B-207ENST00000441915 SOS1Q07889 1333 aaPredicted RBP20.16■□□□□ 0.82
SEMA3B-207ENST00000441915 PNMA6EA0A0J9YXQ4 647 aa20.16■□□□□ 0.82
SEMA3B-207ENST00000441915 NEK4P51957 841 aa20.16■□□□□ 0.82
SEMA3B-207ENST00000441915 CCDC173Q0VFZ6 552 aa20.16■□□□□ 0.82
SEMA3B-207ENST00000441915 TSHZ3Q63HK5 1081 aa20.16■□□□□ 0.82
SEMA3B-207ENST00000441915 MCCP23508 829 aa20.16■□□□□ 0.82
SEMA3B-207ENST00000441915 NECTIN2Q92692 538 aa20.16■□□□□ 0.82
SEMA3B-207ENST00000441915 ESYT1Q9BSJ8 1104 aa20.16■□□□□ 0.82
SEMA3B-207ENST00000441915 MCM2P49736 904 aa20.15■□□□□ 0.82
SEMA3B-207ENST00000441915 ZNF445P59923 1031 aa20.15■□□□□ 0.82
SEMA3B-207ENST00000441915 CEBPAP49715 358 aaPredicted RBP20.15■□□□□ 0.82
SEMA3B-207ENST00000441915 CAVIN1Q6NZI2 390 aaKnown RBP20.15■□□□□ 0.82
SEMA3B-207ENST00000441915 DIP2AQ14689 1571 aa20.14■□□□□ 0.82
SEMA3B-207ENST00000441915 TRIM6-TRIM34B2RNG4 842 aa20.14■□□□□ 0.82
SEMA3B-207ENST00000441915 PIK3C2AO00443 1686 aa20.14■□□□□ 0.81
SEMA3B-207ENST00000441915 RGPD8O14715 1765 aaPredicted RBP20.14■□□□□ 0.81
SEMA3B-207ENST00000441915 HOXC9P31274 260 aa20.14■□□□□ 0.81
SEMA3B-207ENST00000441915 NAP1L5Q96NT1 182 aaPredicted RBP20.14■□□□□ 0.81
SEMA3B-207ENST00000441915 SRCIN1Q9C0H9 1055 aa20.14■□□□□ 0.81
SEMA3B-207ENST00000441915 LRRC37A3O60309 1634 aa20.14■□□□□ 0.81
SEMA3B-207ENST00000441915 ERBB4Q15303 1308 aa20.13■□□□□ 0.81
SEMA3B-207ENST00000441915 RILPL2Q969X0 211 aa20.13■□□□□ 0.81
SEMA3B-207ENST00000441915 BABAM1Q9NWV8 329 aa20.13■□□□□ 0.81
SEMA3B-207ENST00000441915 CACNA1FO60840 1977 aa20.13■□□□□ 0.81
SEMA3B-207ENST00000441915 FAM208AQ9UK61 1670 aaKnown RBP20.13■□□□□ 0.81
SEMA3B-207ENST00000441915 TAF7Q15545 349 aaPredicted RBP20.13■□□□□ 0.81
SEMA3B-207ENST00000441915 ZDHHC9Q9Y397 364 aa20.13■□□□□ 0.81
SEMA3B-207ENST00000441915 LRRFIP2Q9Y608 721 aaKnown RBP20.13■□□□□ 0.81
SEMA3B-207ENST00000441915 PRPF40AO75400 957 aaKnown RBP20.12■□□□□ 0.81
SEMA3B-207ENST00000441915 ZSCAN23Q3MJ62 389 aa20.12■□□□□ 0.81
SEMA3B-207ENST00000441915 TMX3Q96JJ7 454 aa20.12■□□□□ 0.81
SEMA3B-207ENST00000441915 MAP3K5Q99683 1374 aa20.12■□□□□ 0.81
SEMA3B-207ENST00000441915 IL17REQ8NFR9 667 aa20.12■□□□□ 0.81
SEMA3B-207ENST00000441915 PPP1R9BQ96SB3 815 aa20.12■□□□□ 0.81
SEMA3B-207ENST00000441915 XRN1Q8IZH2 1706 aaKnown RBP20.12■□□□□ 0.81
SEMA3B-207ENST00000441915 CHMLP26374 656 aa20.11■□□□□ 0.81
SEMA3B-207ENST00000441915 ANAPC15P60006 121 aa20.11■□□□□ 0.81
SEMA3B-207ENST00000441915 ANO2Q9NQ90 1003 aa20.11■□□□□ 0.81
SEMA3B-207ENST00000441915 STAP2Q9UGK3 403 aa20.11■□□□□ 0.81
SEMA3B-207ENST00000441915 SLIT1O75093 1534 aa20.11■□□□□ 0.81
SEMA3B-207ENST00000441915 UBTFL1P0CB47 393 aaPredicted RBP20.11■□□□□ 0.81
SEMA3B-207ENST00000441915 NUTM2GQ5VZR2 741 aa20.1■□□□□ 0.81
SEMA3B-207ENST00000441915 USP44Q9H0E7 712 aa20.1■□□□□ 0.81
SEMA3B-207ENST00000441915 PXDNLA1KZ92 1463 aa20.1■□□□□ 0.81
SEMA3B-207ENST00000441915 ARHGAP23Q9P227 1491 aa20.09■□□□□ 0.81
SEMA3B-207ENST00000441915 TUBGCP6Q96RT7 1819 aa20.09■□□□□ 0.81
SEMA3B-207ENST00000441915 HSP90AA2PQ14568 343 aaPredicted RBP20.09■□□□□ 0.81
SEMA3B-207ENST00000441915 HDGFL1Q5TGJ6 251 aa20.09■□□□□ 0.81
SEMA3B-207ENST00000441915 ABTB2Q8N961 1025 aa20.09■□□□□ 0.81
SEMA3B-207ENST00000441915 LTV1Q96GA3 475 aaPredicted RBP20.09■□□□□ 0.81
SEMA3B-207ENST00000441915 PALD1Q9ULE6 856 aa20.08■□□□□ 0.8
SEMA3B-207ENST00000441915 AOX1Q06278 1338 aa20.08■□□□□ 0.8
SEMA3B-207ENST00000441915 ANKARQ7Z5J8 1434 aa20.07■□□□□ 0.8
SEMA3B-207ENST00000441915 RRP9O43818 475 aaKnown RBP20.07■□□□□ 0.8
SEMA3B-207ENST00000441915 GPT2Q8TD30 523 aa20.07■□□□□ 0.8
SEMA3B-207ENST00000441915 CUL4AQ13619 759 aa20.07■□□□□ 0.8
SEMA3B-207ENST00000441915 SSH3Q8TE77 659 aa20.07■□□□□ 0.8
SEMA3B-207ENST00000441915 NWD1Q149M9 1564 aa20.06■□□□□ 0.8
SEMA3B-207ENST00000441915 THEMISQ8N1K5 641 aaPredicted RBP20.06■□□□□ 0.8
SEMA3B-207ENST00000441915 INTS4Q96HW7 963 aaKnown RBP20.06■□□□□ 0.8
SEMA3B-207ENST00000441915 PLPPR3Q6T4P5 718 aa20.05■□□□□ 0.8
SEMA3B-207ENST00000441915 IL1RAPL2Q9NP60 686 aa20.05■□□□□ 0.8
SEMA3B-207ENST00000441915 N4BP2Q86UW6 1770 aaPredicted RBP20.05■□□□□ 0.8
SEMA3B-207ENST00000441915 EPB41L2O43491 1005 aaKnown RBP20.05■□□□□ 0.8
SEMA3B-207ENST00000441915 RAB11FIP3O75154 756 aa20.05■□□□□ 0.8
SEMA3B-207ENST00000441915 UNC5CLQ8IV45 518 aa20.05■□□□□ 0.8
SEMA3B-207ENST00000441915 PHAXQ9H814 394 aaKnown RBP20.05■□□□□ 0.8
SEMA3B-207ENST00000441915 BRD1O95696 1058 aa20.04■□□□□ 0.8
SEMA3B-207ENST00000441915 PRIM1P49642 420 aaKnown RBP20.04■□□□□ 0.8
SEMA3B-207ENST00000441915 FOXD4L5Q5VV16 416 aaPredicted RBP20.04■□□□□ 0.8
SEMA3B-207ENST00000441915 FOXD4L4Q8WXT5 416 aaPredicted RBP20.04■□□□□ 0.8
SEMA3B-207ENST00000441915 IL17RAQ96F46 866 aa20.04■□□□□ 0.8
SEMA3B-207ENST00000441915 SURF6O75683 361 aaKnown RBP20.04■□□□□ 0.8
SEMA3B-207ENST00000441915 MBD3O95983 291 aa20.03■□□□□ 0.8
SEMA3B-207ENST00000441915 PPP1R42Q7Z4L9 355 aa20.03■□□□□ 0.8
SEMA3B-207ENST00000441915 ZSCAN30Q86W11 494 aa20.03■□□□□ 0.8
SEMA3B-207ENST00000441915 RBM27Q9P2N5 1060 aaKnown RBP20.03■□□□□ 0.8
SEMA3B-207ENST00000441915 NOL8Q76FK4 1167 aaKnown RBP20.03■□□□□ 0.8
SEMA3B-207ENST00000441915 C14orf37Q86TY3 774 aa20.03■□□□□ 0.8
SEMA3B-207ENST00000441915 RBSNQ9H1K0 784 aa20.03■□□□□ 0.8
SEMA3B-207ENST00000441915 USHBP1Q8N6Y0 703 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms