RNA–Protein interactions for RNA: ENST00000441703.5

HDAC6-210, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-210ENST00000441703 PARP3Q9Y6F1 533 aa9.05□□□□□ -0.96
HDAC6-210ENST00000441703 EVC2Q86UK5 1308 aa9.05□□□□□ -0.96
HDAC6-210ENST00000441703 HSPA8P11142 646 aaKnown RBP9.04□□□□□ -0.96
HDAC6-210ENST00000441703 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.04□□□□□ -0.96
HDAC6-210ENST00000441703 NLGN1Q8N2Q7 840 aa9.04□□□□□ -0.96
HDAC6-210ENST00000441703 BRCA1P38398 1863 aaKnown RBP9.04□□□□□ -0.96
HDAC6-210ENST00000441703 TMF1P82094 1093 aa9.03□□□□□ -0.96
HDAC6-210ENST00000441703 WBP1LQ9NX94 342 aa9.03□□□□□ -0.96
HDAC6-210ENST00000441703 USP31Q70CQ4 1352 aa9.02□□□□□ -0.97
HDAC6-210ENST00000441703 VEGFBP49765 207 aa9.02□□□□□ -0.97
HDAC6-210ENST00000441703 RASSF7Q02833 373 aa9.02□□□□□ -0.97
HDAC6-210ENST00000441703 NBPF1Q3BBV0 1214 aa9.02□□□□□ -0.97
HDAC6-210ENST00000441703 CHADLQ6NUI6 762 aa9.02□□□□□ -0.97
HDAC6-210ENST00000441703 DPY19L2Q6NUT2 758 aa9.02□□□□□ -0.97
HDAC6-210ENST00000441703 IP6K1Q92551 441 aa9.02□□□□□ -0.97
HDAC6-210ENST00000441703 SBF1O95248 1867 aa9.02□□□□□ -0.97
HDAC6-210ENST00000441703 MEGF6O75095 1541 aa9.01□□□□□ -0.97
HDAC6-210ENST00000441703 C4AP0C0L4 1744 aa9.01□□□□□ -0.97
HDAC6-210ENST00000441703 LMNB1P20700 586 aa9.01□□□□□ -0.97
HDAC6-210ENST00000441703 LINC00116Q8NCU8 138 aa9.01□□□□□ -0.97
HDAC6-210ENST00000441703 RAPGEF4Q8WZA2 1011 aa9.01□□□□□ -0.97
HDAC6-210ENST00000441703 CGNL1Q0VF96 1302 aa9.01□□□□□ -0.97
HDAC6-210ENST00000441703 LOC102724428A0A0B4J2F2 783 aa9□□□□□ -0.97
HDAC6-210ENST00000441703 TATP17735 454 aaPredicted RBP9□□□□□ -0.97
HDAC6-210ENST00000441703 KCNA3P22001 575 aa9□□□□□ -0.97
HDAC6-210ENST00000441703 SIK1P57059 783 aa9□□□□□ -0.97
HDAC6-210ENST00000441703 MAP2K1Q02750 393 aaPredicted RBP9□□□□□ -0.97
HDAC6-210ENST00000441703 TRAPPC3LQ5T215 181 aa9□□□□□ -0.97
HDAC6-210ENST00000441703 NME9Q86XW9 330 aa9□□□□□ -0.97
HDAC6-210ENST00000441703 MIER1Q8N108 512 aa9□□□□□ -0.97
HDAC6-210ENST00000441703 BEGAINQ9BUH8 593 aa9□□□□□ -0.97
HDAC6-210ENST00000441703 TSHZ2Q9NRE2 1034 aa9□□□□□ -0.97
HDAC6-210ENST00000441703 RTCBQ9Y3I0 505 aaKnown RBP9□□□□□ -0.97
HDAC6-210ENST00000441703 PCDH11XQ9BZA7 1347 aa9□□□□□ -0.97
HDAC6-210ENST00000441703 PCDH11YQ9BZA8 1340 aa9□□□□□ -0.97
HDAC6-210ENST00000441703 AMPHP49418 695 aa8.99□□□□□ -0.97
HDAC6-210ENST00000441703 TIAM2Q8IVF5 1701 aa8.98□□□□□ -0.97
HDAC6-210ENST00000441703 TMEM88BA6NKF7 163 aa8.98□□□□□ -0.97
HDAC6-210ENST00000441703 RFC4P35249 363 aa8.98□□□□□ -0.97
HDAC6-210ENST00000441703 ATP6V1AP38606 617 aa8.98□□□□□ -0.97
HDAC6-210ENST00000441703 RGPD2P0DJD1 1756 aa8.98□□□□□ -0.97
HDAC6-210ENST00000441703 VIRMAQ69YN4 1812 aaKnown RBP8.97□□□□□ -0.97
HDAC6-210ENST00000441703 CHRNA5P30532 468 aa8.97□□□□□ -0.97
HDAC6-210ENST00000441703 SUPT16HQ9Y5B9 1047 aaKnown RBP8.97□□□□□ -0.97
HDAC6-210ENST00000441703 SBNO2Q9Y2G9 1366 aa8.97□□□□□ -0.97
HDAC6-210ENST00000441703 KDM6AO15550 1401 aaPredicted RBP8.97□□□□□ -0.97
HDAC6-210ENST00000441703 CD163L1Q9NR16 1453 aa8.96□□□□□ -0.97
HDAC6-210ENST00000441703 ITGB4P16144 1822 aa8.96□□□□□ -0.97
HDAC6-210ENST00000441703 POTECB2RU33 542 aa8.96□□□□□ -0.98
HDAC6-210ENST00000441703 GYS1P13807 737 aa8.96□□□□□ -0.98
HDAC6-210ENST00000441703 ADRA2BP18089 450 aa8.96□□□□□ -0.98
HDAC6-210ENST00000441703 DEFB115Q30KQ5 88 aa8.96□□□□□ -0.98
HDAC6-210ENST00000441703 PRPF38BQ5VTL8 546 aaKnown RBP8.96□□□□□ -0.98
HDAC6-210ENST00000441703 HDGFL2Q7Z4V5 671 aaPredicted RBP8.96□□□□□ -0.98
HDAC6-210ENST00000441703 USHBP1Q8N6Y0 703 aa8.96□□□□□ -0.98
HDAC6-210ENST00000441703 PIGBQ92521 554 aa8.96□□□□□ -0.98
HDAC6-210ENST00000441703 SMG6Q86US8 1419 aaKnown RBP8.96□□□□□ -0.98
HDAC6-210ENST00000441703 HOXC9P31274 260 aa8.95□□□□□ -0.98
HDAC6-210ENST00000441703 ITPK1Q13572 414 aa8.95□□□□□ -0.98
HDAC6-210ENST00000441703 PAXIP1Q6ZW49 1069 aaPredicted RBP8.95□□□□□ -0.98
HDAC6-210ENST00000441703 ARHGEF1Q92888 912 aaKnown RBP8.95□□□□□ -0.98
HDAC6-210ENST00000441703 YTHDC1Q96MU7 727 aaKnown RBP8.95□□□□□ -0.98
HDAC6-210ENST00000441703 MCOLN1Q9GZU1 580 aa8.95□□□□□ -0.98
HDAC6-210ENST00000441703 TMOD3Q9NYL9 352 aa8.95□□□□□ -0.98
HDAC6-210ENST00000441703 WDR33Q9C0J8 1336 aaKnown RBP8.95□□□□□ -0.98
HDAC6-210ENST00000441703 EDC4Q6P2E9 1401 aaKnown RBP8.95□□□□□ -0.98
HDAC6-210ENST00000441703 POTEIP0CG38 1075 aa8.94□□□□□ -0.98
HDAC6-210ENST00000441703 POTEJP0CG39 1038 aa8.94□□□□□ -0.98
HDAC6-210ENST00000441703 LDHDQ86WU2 507 aa8.94□□□□□ -0.98
HDAC6-210ENST00000441703 TMC1Q8TDI8 760 aa8.94□□□□□ -0.98
HDAC6-210ENST00000441703 ABT1Q9ULW3 272 aaKnown RBP8.94□□□□□ -0.98
HDAC6-210ENST00000441703 PASKQ96RG2 1323 aa8.94□□□□□ -0.98
HDAC6-210ENST00000441703 PDE4DIPQ5VU43 2346 aa8.94□□□□□ -0.98
HDAC6-210ENST00000441703 MAP2P11137 1827 aaKnown RBP8.94□□□□□ -0.98
HDAC6-210ENST00000441703 CCDC88AQ3V6T2 1871 aa8.94□□□□□ -0.98
HDAC6-210ENST00000441703 IQCA1LA6NCM1 817 aa8.93□□□□□ -0.98
HDAC6-210ENST00000441703 RASSF10A6NK89 507 aa8.93□□□□□ -0.98
HDAC6-210ENST00000441703 ERFEQ4G0M1 354 aa8.93□□□□□ -0.98
HDAC6-210ENST00000441703 NBPF6Q5VWK0 638 aa8.93□□□□□ -0.98
HDAC6-210ENST00000441703 NBPF4Q96M43 638 aa8.93□□□□□ -0.98
HDAC6-210ENST00000441703 CLEC11AQ9Y240 323 aa8.93□□□□□ -0.98
HDAC6-210ENST00000441703 MAP3K19Q56UN5 1328 aa8.93□□□□□ -0.98
HDAC6-210ENST00000441703 CYP27B1O15528 508 aa8.92□□□□□ -0.98
HDAC6-210ENST00000441703 GRM1Q13255 1194 aa8.92□□□□□ -0.98
HDAC6-210ENST00000441703 EAPPQ56P03 285 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-210ENST00000441703 ERICH6Q7L0X2 663 aa8.92□□□□□ -0.98
HDAC6-210ENST00000441703 TTLL6Q8N841 843 aa8.92□□□□□ -0.98
HDAC6-210ENST00000441703 ZNF219Q9P2Y4 722 aaPredicted RBP8.92□□□□□ -0.98
HDAC6-210ENST00000441703 ASAP1Q9ULH1 1129 aa8.92□□□□□ -0.98
HDAC6-210ENST00000441703 RTL1A6NKG5 1358 aa8.91□□□□□ -0.98
HDAC6-210ENST00000441703 RPS6KA4O75676 772 aa8.91□□□□□ -0.98
HDAC6-210ENST00000441703 ECE1P42892 770 aa8.91□□□□□ -0.98
HDAC6-210ENST00000441703 DGKZQ13574 1117 aa8.91□□□□□ -0.98
HDAC6-210ENST00000441703 COG3Q96JB2 828 aa8.91□□□□□ -0.98
HDAC6-210ENST00000441703 RBM42Q9BTD8 480 aaKnown RBP8.91□□□□□ -0.98
HDAC6-210ENST00000441703 TSKSQ9UJT2 592 aa8.91□□□□□ -0.98
HDAC6-210ENST00000441703 NFKBIEO00221 500 aa8.9□□□□□ -0.98
HDAC6-210ENST00000441703 DDNO94850 711 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-210ENST00000441703 DDR1Q08345 913 aa8.9□□□□□ -0.98
HDAC6-210ENST00000441703 RC3H1Q5TC82 1133 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms