RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 LGR5O75473 907 aa7.64□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 SLC27A5Q9Y2P5 690 aa7.64□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 FAM13AO94988 1023 aa7.63□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 CTHP32929 405 aa7.63□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 DOK7Q18PE1 504 aa7.63□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 OXLD1Q5BKU9 147 aa7.63□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 PDXDC2PQ6P474 469 aa7.63□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 TMC1Q8TDI8 760 aa7.63□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 WRNQ14191 1432 aaPredicted RBP eCLIP7.63□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 TREHO43280 583 aa7.63□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 NDUFB5O43674 189 aa7.63□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 LDHBP07195 334 aaKnown RBP7.63□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 FANCCQ00597 558 aa7.63□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 CAPN12Q6ZSI9 719 aa7.63□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 DNAJA1P31689 397 aaKnown RBP7.62□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 MORN1Q5T089 497 aa7.62□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 SDE2Q6IQ49 451 aa7.62□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 MORC4Q8TE76 937 aa7.62□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 SOGA1O94964 1423 aa7.62□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 RAB11FIP3O75154 756 aa7.61□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 PRPF40AO75400 957 aaKnown RBP7.61□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 MAPK8P45983 427 aa7.61□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 FMR1Q06787 632 aaKnown RBP eCLIP7.61□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 KMT5BQ4FZB7 885 aa7.61□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 GPR153Q6NV75 609 aa7.61□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 TMC4Q7Z404 712 aa7.61□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 ARMC2Q8NEN0 867 aa7.61□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 PMFBP1Q8TBY8 1022 aa7.61□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 HELQQ8TDG4 1101 aa7.61□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 USB1Q9BQ65 265 aaKnown RBP7.61□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 ACBD3Q9H3P7 528 aa7.61□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 ZSWIM6Q9HCJ5 1215 aa7.61□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 VTI1BQ9UEU0 232 aa7.61□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 FANCIQ9NVI1 1328 aa7.61□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 WEE1P30291 646 aa7.61□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 ZNF76P36508 570 aa7.61□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 FKBP5Q13451 457 aaPredicted RBP7.61□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 NAA30Q147X3 362 aaPredicted RBP7.61□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 PUS10Q3MIT2 529 aaKnown RBP7.61□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 EGFLAMQ63HQ2 1017 aa7.61□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 GPKOWQ92917 476 aaPredicted RBP eCLIP7.61□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 DUSP9Q99956 384 aaKnown RBP7.61□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 RNF40O75150 1001 aa7.6□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 PTPRNQ16849 979 aa7.6□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 ADAM32Q8TC27 787 aa7.6□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 KCNH8Q96L42 1107 aa7.6□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 OCSTAMPQ9BR26 566 aa7.6□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 ZSWIM4Q9H7M6 989 aa7.6□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 PLCB3Q01970 1234 aa7.6□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 PSMD2Q13200 908 aa7.6□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 NME8Q8N427 588 aa7.6□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 GMLQ99445 158 aa7.6□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 SEPT9Q9UHD8 586 aaPredicted RBP7.6□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 PEX14O75381 377 aa7.59□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 CCDC85AQ96PX6 553 aaPredicted RBP7.59□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 KCNK17Q96T54 332 aa7.59□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 UBA5Q9GZZ9 404 aa7.59□□□□□ -1.19
ALMS1-IT1-201ENST00000441587 NPR3P17342 541 aa7.58□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 TNNI2P48788 182 aa7.58□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 DAB2P98082 770 aa7.58□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 SOGA3Q5TF21 947 aa7.58□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 NBPF14Q5TI25 921 aa7.58□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 RNF19BQ6ZMZ0 732 aa7.58□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 COL26A1Q96A83 441 aa7.58□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 CITED4Q96RK1 184 aa7.58□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.58□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 TNIKQ9UKE5 1360 aa7.58□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 RBL2Q08999 1139 aa7.58□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 ZBTB33Q86T24 672 aa7.58□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 DZIP3Q86Y13 1208 aaKnown RBP7.58□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 TSEN2Q8NCE0 465 aaKnown RBP7.58□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 SPACA7Q96KW9 195 aa7.58□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 ARHGAP9Q9BRR9 750 aa7.58□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 PRKD2Q9BZL6 878 aa7.58□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 TBX22Q9Y458 520 aa7.58□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 PCDHGA11Q9Y5H2 935 aa7.58□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 HMGXB3Q12766 1538 aa7.57□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 NCAPD3P42695 1498 aa7.57□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 IGBP1P78318 339 aa7.57□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 ATP2B2Q01814 1243 aa7.57□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 ARID5AQ03989 594 aa7.57□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 EHHADHQ08426 723 aa7.57□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 SAMD7Q7Z3H4 446 aa7.57□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 DCBLD2Q96PD2 775 aa7.57□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 PIF1Q9H611 641 aa7.57□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 SYNJ1O43426 1573 aa7.57□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 hCG_2014768A0A024R1R8 64 aa7.57□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 LONRF3Q496Y0 759 aa7.57□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 BLOC1S3Q6QNY0 202 aa7.57□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 DMRTB1Q96MA1 342 aa7.57□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 PURBQ96QR8 312 aaKnown RBP7.57□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 METRNQ9UJH8 293 aa7.57□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 RUSC2Q8N2Y8 1516 aa7.56□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 CEP162Q5TB80 1403 aa7.56□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 IBSPP21815 317 aaPredicted RBP7.56□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 DSC3Q14574 896 aa7.56□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 CHMP4BQ9H444 224 aaKnown RBP7.56□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 RABGEF1Q9UJ41 708 aa7.56□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 INPP5FQ9Y2H2 1132 aa7.56□□□□□ -1.2
ALMS1-IT1-201ENST00000441587 GOLGA3Q08378 1498 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms