RNA–Protein interactions for RNA: ENST00000441517.6

SCAP-207, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,748 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-207ENST00000441517 SPHKAPQ2M3C7 1700 aa18.19■□□□□ 0.5
SCAP-207ENST00000441517 SETD1BQ9UPS6 1966 aaKnown RBP18.19■□□□□ 0.5
SCAP-207ENST00000441517 PRAMEF22A3QJZ6 481 aa18.19■□□□□ 0.5
SCAP-207ENST00000441517 PHF8Q9UPP1 1060 aa18.19■□□□□ 0.5
SCAP-207ENST00000441517 RBM25P49756 843 aaKnown RBP18.18■□□□□ 0.5
SCAP-207ENST00000441517 PROSER2Q86WR7 435 aaPredicted RBP18.18■□□□□ 0.5
SCAP-207ENST00000441517 SPC24Q8NBT2 197 aa18.18■□□□□ 0.5
SCAP-207ENST00000441517 RNF17Q9BXT8 1623 aaKnown RBP18.18■□□□□ 0.5
SCAP-207ENST00000441517 PRIM1P49642 420 aaKnown RBP18.18■□□□□ 0.5
SCAP-207ENST00000441517 HSP90AA2PQ14568 343 aaPredicted RBP18.18■□□□□ 0.5
SCAP-207ENST00000441517 IL17REQ8NFR9 667 aa18.18■□□□□ 0.5
SCAP-207ENST00000441517 ORAI2Q96SN7 254 aa18.18■□□□□ 0.5
SCAP-207ENST00000441517 UHRF1BP1LA0JNW5 1464 aa18.17■□□□□ 0.5
SCAP-207ENST00000441517 RAB3GAP1Q15042 981 aa18.17■□□□□ 0.5
SCAP-207ENST00000441517 CAMK4Q16566 473 aa18.17■□□□□ 0.5
SCAP-207ENST00000441517 VSIG10Q8N0Z9 540 aa18.17■□□□□ 0.5
SCAP-207ENST00000441517 MAP3K2Q9Y2U5 619 aa18.17■□□□□ 0.5
SCAP-207ENST00000441517 EFCAB6Q5THR3 1501 aa18.17■□□□□ 0.5
SCAP-207ENST00000441517 TTC5Q8N0Z6 440 aa18.16■□□□□ 0.5
SCAP-207ENST00000441517 DDX11Q96FC9 970 aa18.16■□□□□ 0.5
SCAP-207ENST00000441517 MYOM2P54296 1465 aa18.16■□□□□ 0.5
SCAP-207ENST00000441517 KIF1BO60333 1816 aa18.16■□□□□ 0.5
SCAP-207ENST00000441517 FAM173BQ6P4H8 233 aa18.16■□□□□ 0.5
SCAP-207ENST00000441517 LRRC2Q9BYS8 371 aa18.16■□□□□ 0.5
SCAP-207ENST00000441517 CNTROBQ8N137 903 aa18.15■□□□□ 0.5
SCAP-207ENST00000441517 TNRQ92752 1358 aa18.15■□□□□ 0.5
SCAP-207ENST00000441517 STRN4Q9NRL3 753 aa18.15■□□□□ 0.5
SCAP-207ENST00000441517 CEP152O94986 1710 aa18.15■□□□□ 0.5
SCAP-207ENST00000441517 NEXNQ0ZGT2 675 aa18.15■□□□□ 0.5
SCAP-207ENST00000441517 ROBO2Q9HCK4 1378 aa18.15■□□□□ 0.5
SCAP-207ENST00000441517 DNAAF4Q8WXU2 420 aa18.15■□□□□ 0.5
SCAP-207ENST00000441517 GPATCH3Q96I76 525 aa18.15■□□□□ 0.5
SCAP-207ENST00000441517 PUS7Q96PZ0 661 aaKnown RBP18.15■□□□□ 0.5
SCAP-207ENST00000441517 NBPF6Q5VWK0 638 aa18.14■□□□□ 0.5
SCAP-207ENST00000441517 NBPF4Q96M43 638 aa18.14■□□□□ 0.5
SCAP-207ENST00000441517 TFIP11Q9UBB9 837 aaKnown RBP18.14■□□□□ 0.5
SCAP-207ENST00000441517 EDC3Q96F86 508 aaKnown RBP18.14■□□□□ 0.49
SCAP-207ENST00000441517 TULP4Q9NRJ4 1543 aa18.14■□□□□ 0.49
SCAP-207ENST00000441517 TET3O43151 1660 aa18.14■□□□□ 0.49
SCAP-207ENST00000441517 ZKSCAN1P17029 563 aaPredicted RBP18.14■□□□□ 0.49
SCAP-207ENST00000441517 RHPN1Q8TCX5 695 aa18.14■□□□□ 0.49
SCAP-207ENST00000441517 ABCC4O15439 1325 aa18.13■□□□□ 0.49
SCAP-207ENST00000441517 ESYT1Q9BSJ8 1104 aa18.13■□□□□ 0.49
SCAP-207ENST00000441517 ZSCAN23Q3MJ62 389 aa18.13■□□□□ 0.49
SCAP-207ENST00000441517 RAB11FIP4Q86YS3 637 aa18.13■□□□□ 0.49
SCAP-207ENST00000441517 HOXC9P31274 260 aa18.13■□□□□ 0.49
SCAP-207ENST00000441517 PLEKHO1Q53GL0 409 aaPredicted RBP18.13■□□□□ 0.49
SCAP-207ENST00000441517 CHMP4CQ96CF2 233 aa18.13■□□□□ 0.49
SCAP-207ENST00000441517 TSPOAP1O95153 1857 aa18.13■□□□□ 0.49
SCAP-207ENST00000441517 TAF7LQ5H9L4 462 aa18.12■□□□□ 0.49
SCAP-207ENST00000441517 CIZ1Q9ULV3 898 aaPredicted RBP18.12■□□□□ 0.49
SCAP-207ENST00000441517 ABCC3O15438 1527 aa18.12■□□□□ 0.49
SCAP-207ENST00000441517 PPRC1Q5VV67 1664 aaKnown RBP18.12■□□□□ 0.49
SCAP-207ENST00000441517 SNX21Q969T3 373 aa18.11■□□□□ 0.49
SCAP-207ENST00000441517 KIF2CQ99661 725 aa18.11■□□□□ 0.49
SCAP-207ENST00000441517 MYD88Q99836 296 aa18.11■□□□□ 0.49
SCAP-207ENST00000441517 PTPRCP08575 1304 aa18.11■□□□□ 0.49
SCAP-207ENST00000441517 ZNF853P0CG23 659 aa18.11■□□□□ 0.49
SCAP-207ENST00000441517 NSFL1CQ9UNZ2 370 aaKnown RBP18.11■□□□□ 0.49
SCAP-207ENST00000441517 RTL1A6NKG5 1358 aa18.1■□□□□ 0.49
SCAP-207ENST00000441517 H3BQV1 296 aa18.1■□□□□ 0.49
SCAP-207ENST00000441517 IFFO2Q5TF58 517 aa18.1■□□□□ 0.49
SCAP-207ENST00000441517 USP44Q9H0E7 712 aa18.1■□□□□ 0.49
SCAP-207ENST00000441517 GUCY1B3Q02153 619 aa18.1■□□□□ 0.49
SCAP-207ENST00000441517 CNPY2Q9Y2B0 182 aa18.1■□□□□ 0.49
SCAP-207ENST00000441517 CHMLP26374 656 aa18.09■□□□□ 0.49
SCAP-207ENST00000441517 ATP8B2P98198 1209 aa18.09■□□□□ 0.49
SCAP-207ENST00000441517 BICD2Q8TD16 824 aa18.09■□□□□ 0.49
SCAP-207ENST00000441517 SYAP1Q96A49 352 aaPredicted RBP18.09■□□□□ 0.49
SCAP-207ENST00000441517 TOMM22Q9NS69 142 aa18.09■□□□□ 0.49
SCAP-207ENST00000441517 RBSNQ9H1K0 784 aa18.09■□□□□ 0.49
SCAP-207ENST00000441517 USP25Q9UHP3 1055 aa18.09■□□□□ 0.49
SCAP-207ENST00000441517 GADD45BO75293 160 aaPredicted RBP18.09■□□□□ 0.49
SCAP-207ENST00000441517 PROSER3Q2NL68 480 aa18.09■□□□□ 0.49
SCAP-207ENST00000441517 KIAA2012Q0VF49 1180 aa18.08■□□□□ 0.48
SCAP-207ENST00000441517 GLIPR1L2Q4G1C9 344 aa18.08■□□□□ 0.48
SCAP-207ENST00000441517 SNRKQ9NRH2 765 aa18.08■□□□□ 0.48
SCAP-207ENST00000441517 FAM184AQ8NB25 1140 aa18.08■□□□□ 0.48
SCAP-207ENST00000441517 KIF1BPQ96EK5 621 aa18.08■□□□□ 0.48
SCAP-207ENST00000441517 NFATC2IPQ8NCF5 419 aa18.07■□□□□ 0.48
SCAP-207ENST00000441517 EDC4Q6P2E9 1401 aaKnown RBP18.07■□□□□ 0.48
SCAP-207ENST00000441517 CKAP2LQ8IYA6 745 aa18.07■□□□□ 0.48
SCAP-207ENST00000441517 GLI2P10070 1586 aa18.07■□□□□ 0.48
SCAP-207ENST00000441517 PTMSP20962 102 aa18.07■□□□□ 0.48
SCAP-207ENST00000441517 ZRSR1Q15695 479 aaKnown RBP18.07■□□□□ 0.48
SCAP-207ENST00000441517 GIMAP6Q6P9H5 292 aa18.07■□□□□ 0.48
SCAP-207ENST00000441517 UBE3BQ7Z3V4 1068 aa18.07■□□□□ 0.48
SCAP-207ENST00000441517 ANKLE2Q86XL3 938 aa18.07■□□□□ 0.48
SCAP-207ENST00000441517 RUFY2Q8WXA3 655 aa18.07■□□□□ 0.48
SCAP-207ENST00000441517 PDRG1Q9NUG6 133 aa18.07■□□□□ 0.48
SCAP-207ENST00000441517 DDX58O95786 925 aaKnown RBP18.06■□□□□ 0.48
SCAP-207ENST00000441517 LARP1BQ659C4 914 aaKnown RBP18.06■□□□□ 0.48
SCAP-207ENST00000441517 ANKRD24Q8TF21 1146 aa18.06■□□□□ 0.48
SCAP-207ENST00000441517 MLH3Q9UHC1 1453 aa18.06■□□□□ 0.48
SCAP-207ENST00000441517 HCLS1P14317 486 aaPredicted RBP18.06■□□□□ 0.48
SCAP-207ENST00000441517 ZBTB3Q9H5J0 574 aa18.06■□□□□ 0.48
SCAP-207ENST00000441517 KLHL40Q2TBA0 621 aa18.05■□□□□ 0.48
SCAP-207ENST00000441517 CHST3Q7LGC8 479 aa18.05■□□□□ 0.48
SCAP-207ENST00000441517 C17orf53Q8N3J3 647 aaPredicted RBP18.05■□□□□ 0.48
SCAP-207ENST00000441517 SOS1Q07889 1333 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms