RNA–Protein interactions for RNA: ENST00000440902.2

LYSMD1-202, Transcript of LysM domain containing 1, humanhuman

TSL 2 BASIC

Gene LYSMD1, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-202ENST00000440902 SSFA2P28290 1259 aa11.09□□□□□ -0.63
LYSMD1-202ENST00000440902 ATP6V1AP38606 617 aa11.09□□□□□ -0.63
LYSMD1-202ENST00000440902 ITPK1Q13572 414 aa11.09□□□□□ -0.63
LYSMD1-202ENST00000440902 EIF4A2Q14240 407 aaKnown RBP11.09□□□□□ -0.63
LYSMD1-202ENST00000440902 IFNL2Q8IZJ0 200 aa11.09□□□□□ -0.63
LYSMD1-202ENST00000440902 ZNF831Q5JPB2 1677 aa11.08□□□□□ -0.64
LYSMD1-202ENST00000440902 KIF13BQ9NQT8 1826 aa11.08□□□□□ -0.64
LYSMD1-202ENST00000440902 ZNF526Q8TF50 670 aaPredicted RBP11.08□□□□□ -0.64
LYSMD1-202ENST00000440902 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.08□□□□□ -0.64
LYSMD1-202ENST00000440902 C4AP0C0L4 1744 aa11.08□□□□□ -0.64
LYSMD1-202ENST00000440902 KIAA1551Q9HCM1 1747 aa11.08□□□□□ -0.64
LYSMD1-202ENST00000440902 CICQ96RK0 1608 aaPredicted RBP11.07□□□□□ -0.64
LYSMD1-202ENST00000440902 PCGF6Q9BYE7 350 aa11.07□□□□□ -0.64
LYSMD1-202ENST00000440902 ATG3Q9NT62 314 aa11.07□□□□□ -0.64
LYSMD1-202ENST00000440902 RNF216Q9NWF9 866 aaPredicted RBP11.07□□□□□ -0.64
LYSMD1-202ENST00000440902 ADCY9O60503 1353 aa11.06□□□□□ -0.64
LYSMD1-202ENST00000440902 KDRP35968 1356 aa11.06□□□□□ -0.64
LYSMD1-202ENST00000440902 GPBP1L1Q9HC44 474 aaPredicted RBP11.06□□□□□ -0.64
LYSMD1-202ENST00000440902 TIMELESSQ9UNS1 1208 aa11.06□□□□□ -0.64
LYSMD1-202ENST00000440902 VIRMAQ69YN4 1812 aaKnown RBP11.05□□□□□ -0.64
LYSMD1-202ENST00000440902 MMP10P09238 476 aa11.05□□□□□ -0.64
LYSMD1-202ENST00000440902 RBM42Q9BTD8 480 aaKnown RBP11.05□□□□□ -0.64
LYSMD1-202ENST00000440902 MYH14Q7Z406 1995 aaKnown RBP11.05□□□□□ -0.64
LYSMD1-202ENST00000440902 PLEKHG2Q9H7P9 1386 aa11.04□□□□□ -0.64
LYSMD1-202ENST00000440902 BRCA1P38398 1863 aaKnown RBP11.04□□□□□ -0.64
LYSMD1-202ENST00000440902 KDM6AO15550 1401 aaPredicted RBP11.04□□□□□ -0.64
LYSMD1-202ENST00000440902 SCN11AQ9UI33 1791 aa11.04□□□□□ -0.64
LYSMD1-202ENST00000440902 HSPA5P11021 654 aaKnown RBP11.04□□□□□ -0.64
LYSMD1-202ENST00000440902 ZNF530Q6P9A1 599 aaPredicted RBP11.04□□□□□ -0.64
LYSMD1-202ENST00000440902 PANK3Q9H999 370 aa11.04□□□□□ -0.64
LYSMD1-202ENST00000440902 RTCBQ9Y3I0 505 aaKnown RBP11.04□□□□□ -0.64
LYSMD1-202ENST00000440902 PXDNLA1KZ92 1463 aa11.04□□□□□ -0.64
LYSMD1-202ENST00000440902 GOLGB1Q14789 3259 aaKnown RBP11.04□□□□□ -0.64
LYSMD1-202ENST00000440902 TJP1Q07157 1748 aa11.04□□□□□ -0.64
LYSMD1-202ENST00000440902 EIF4G2P78344 907 aaKnown RBP eCLIP11.03□□□□□ -0.64
LYSMD1-202ENST00000440902 PLEKHO1Q53GL0 409 aaPredicted RBP11.03□□□□□ -0.64
LYSMD1-202ENST00000440902 SLC4A9Q96Q91 983 aa11.03□□□□□ -0.64
LYSMD1-202ENST00000440902 CLSPNQ9HAW4 1339 aa11.03□□□□□ -0.64
LYSMD1-202ENST00000440902 ERVV-2B6SEH9 535 aa11.02□□□□□ -0.65
LYSMD1-202ENST00000440902 HSP90AB1P08238 724 aaKnown RBP11.02□□□□□ -0.65
LYSMD1-202ENST00000440902 CABP4P57796 275 aa11.02□□□□□ -0.65
LYSMD1-202ENST00000440902 TRAPPC3LQ5T215 181 aa11.02□□□□□ -0.65
LYSMD1-202ENST00000440902 AEBP1Q8IUX7 1158 aa11.02□□□□□ -0.65
LYSMD1-202ENST00000440902 DCAF5Q96JK2 942 aa11.02□□□□□ -0.65
LYSMD1-202ENST00000440902 C10orf71Q711Q0 1435 aa11.01□□□□□ -0.65
LYSMD1-202ENST00000440902 C1orf141Q5JVX7 400 aa11.01□□□□□ -0.65
LYSMD1-202ENST00000440902 MORC1Q86VD1 984 aa11.01□□□□□ -0.65
LYSMD1-202ENST00000440902 ARHGEF1Q92888 912 aaKnown RBP11.01□□□□□ -0.65
LYSMD1-202ENST00000440902 BCS1LQ9Y276 419 aa11.01□□□□□ -0.65
LYSMD1-202ENST00000440902 CNTNAP4Q9C0A0 1308 aa11.01□□□□□ -0.65
LYSMD1-202ENST00000440902 ARFGEF1Q9Y6D6 1849 aa11□□□□□ -0.65
LYSMD1-202ENST00000440902 A0A0G2JLW4 131 aa11□□□□□ -0.65
LYSMD1-202ENST00000440902 PTCD1O75127 700 aaKnown RBP11□□□□□ -0.65
LYSMD1-202ENST00000440902 RFC4P35249 363 aa11□□□□□ -0.65
LYSMD1-202ENST00000440902 AMOTQ4VCS5 1084 aa11□□□□□ -0.65
LYSMD1-202ENST00000440902 RC3H1Q5TC82 1133 aaKnown RBP11□□□□□ -0.65
LYSMD1-202ENST00000440902 NLGN1Q8N2Q7 840 aa11□□□□□ -0.65
LYSMD1-202ENST00000440902 RPS6KA4O75676 772 aa10.99□□□□□ -0.65
LYSMD1-202ENST00000440902 GYS1P13807 737 aa10.99□□□□□ -0.65
LYSMD1-202ENST00000440902 MTHFSP49914 203 aa10.99□□□□□ -0.65
LYSMD1-202ENST00000440902 CCDC87Q9NVE4 849 aa10.99□□□□□ -0.65
LYSMD1-202ENST00000440902 DPEP1P16444 411 aa10.98□□□□□ -0.65
LYSMD1-202ENST00000440902 HSPA6P17066 643 aa10.98□□□□□ -0.65
LYSMD1-202ENST00000440902 CRKLP46109 303 aaKnown RBP10.98□□□□□ -0.65
LYSMD1-202ENST00000440902 TGFB2P61812 414 aa10.98□□□□□ -0.65
LYSMD1-202ENST00000440902 SULT6B1Q6IMI4 303 aa10.98□□□□□ -0.65
LYSMD1-202ENST00000440902 NFATC2IPQ8NCF5 419 aa10.98□□□□□ -0.65
LYSMD1-202ENST00000440902 PARP3Q9Y6F1 533 aa10.98□□□□□ -0.65
LYSMD1-202ENST00000440902 ADAMTS7Q9UKP4 1686 aa10.98□□□□□ -0.65
LYSMD1-202ENST00000440902 KIF3CO14782 793 aa10.97□□□□□ -0.65
LYSMD1-202ENST00000440902 FCHSD2O94868 740 aa10.97□□□□□ -0.65
LYSMD1-202ENST00000440902 ARHGAP27Q6ZUM4 889 aa10.97□□□□□ -0.65
LYSMD1-202ENST00000440902 SRP68Q9UHB9 627 aaKnown RBP10.97□□□□□ -0.65
LYSMD1-202ENST00000440902 KNSTRNQ9Y448 316 aa10.97□□□□□ -0.65
LYSMD1-202ENST00000440902 AFDNP55196 1824 aaKnown RBP10.96□□□□□ -0.65
LYSMD1-202ENST00000440902 USP42Q9H9J4 1324 aaKnown RBP10.95□□□□□ -0.66
LYSMD1-202ENST00000440902 HOXD11P31277 338 aaPredicted RBP10.95□□□□□ -0.66
LYSMD1-202ENST00000440902 IL13P35225 146 aa10.95□□□□□ -0.66
LYSMD1-202ENST00000440902 FKBP8Q14318 412 aa10.95□□□□□ -0.66
LYSMD1-202ENST00000440902 CCER1Q8TC90 406 aaPredicted RBP10.95□□□□□ -0.66
LYSMD1-202ENST00000440902 MRC1P22897 1456 aa10.94□□□□□ -0.66
LYSMD1-202ENST00000440902 SBF1O95248 1867 aa10.94□□□□□ -0.66
LYSMD1-202ENST00000440902 DDR1Q08345 913 aa10.94□□□□□ -0.66
LYSMD1-202ENST00000440902 DNAJC10Q8IXB1 793 aa10.94□□□□□ -0.66
LYSMD1-202ENST00000440902 KCPQ6ZWJ8 1503 aa10.94□□□□□ -0.66
LYSMD1-202ENST00000440902 UBR2Q8IWV8 1755 aa10.93□□□□□ -0.66
LYSMD1-202ENST00000440902 WDR90Q96KV7 1748 aa10.93□□□□□ -0.66
LYSMD1-202ENST00000440902 ZBTB22O15209 634 aa10.93□□□□□ -0.66
LYSMD1-202ENST00000440902 HMOX1P09601 288 aa10.93□□□□□ -0.66
LYSMD1-202ENST00000440902 KCNA3P22001 575 aa10.93□□□□□ -0.66
LYSMD1-202ENST00000440902 AKAP4Q5JQC9 854 aa10.93□□□□□ -0.66
LYSMD1-202ENST00000440902 SLC52A2Q9HAB3 445 aa10.93□□□□□ -0.66
LYSMD1-202ENST00000440902 LGR6Q9HBX8 967 aa10.93□□□□□ -0.66
LYSMD1-202ENST00000440902 NMRK2Q9NPI5 230 aa10.93□□□□□ -0.66
LYSMD1-202ENST00000440902 DLEC1Q9Y238 1755 aa10.93□□□□□ -0.66
LYSMD1-202ENST00000440902 TNRC6CQ9HCJ0 1690 aaKnown RBP10.92□□□□□ -0.66
LYSMD1-202ENST00000440902 RNMTO43148 476 aaKnown RBP10.92□□□□□ -0.66
LYSMD1-202ENST00000440902 CHRNA5P30532 468 aa10.92□□□□□ -0.66
LYSMD1-202ENST00000440902 SLC39A6Q13433 755 aa10.92□□□□□ -0.66
LYSMD1-202ENST00000440902 AMER1Q5JTC6 1135 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms