RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 PPM1GO15355 546 aaPredicted RBP15.51■□□□□ 0.07
AC009404.1-202ENST00000439955 IL13P35225 146 aa15.51■□□□□ 0.07
AC009404.1-202ENST00000439955 PNNQ9H307 717 aaKnown RBP15.51■□□□□ 0.07
AC009404.1-202ENST00000439955 KAT6BQ8WYB5 2073 aa15.5■□□□□ 0.07
AC009404.1-202ENST00000439955 APLP1P51693 650 aa15.5■□□□□ 0.07
AC009404.1-202ENST00000439955 IGSF1Q8N6C5 1336 aa15.49■□□□□ 0.07
AC009404.1-202ENST00000439955 DOT1LQ8TEK3 1739 aa15.49■□□□□ 0.07
AC009404.1-202ENST00000439955 U2AF1L5P0DN76 240 aaPredicted RBP15.49■□□□□ 0.07
AC009404.1-202ENST00000439955 AMPHP49418 695 aa15.49■□□□□ 0.07
AC009404.1-202ENST00000439955 U2AF1Q01081 240 aaKnown RBP eCLIP15.49■□□□□ 0.07
AC009404.1-202ENST00000439955 SMIM5Q71RC9 77 aa15.49■□□□□ 0.07
AC009404.1-202ENST00000439955 DNAJC5GQ8N7S2 189 aa15.49■□□□□ 0.07
AC009404.1-202ENST00000439955 HOXC9P31274 260 aa15.48■□□□□ 0.07
AC009404.1-202ENST00000439955 RUNDC1Q96C34 613 aa15.48■□□□□ 0.07
AC009404.1-202ENST00000439955 RNF216Q9NWF9 866 aaPredicted RBP15.48■□□□□ 0.07
AC009404.1-202ENST00000439955 U2SURPO15042 1029 aaKnown RBP15.47■□□□□ 0.07
AC009404.1-202ENST00000439955 LY75O60449 1722 aa15.47■□□□□ 0.07
AC009404.1-202ENST00000439955 FCHSD2O94868 740 aa15.47■□□□□ 0.07
AC009404.1-202ENST00000439955 EIF4A2Q14240 407 aaKnown RBP15.47■□□□□ 0.07
AC009404.1-202ENST00000439955 COL13A1Q5TAT6 717 aaPredicted RBP15.47■□□□□ 0.07
AC009404.1-202ENST00000439955 ZCRB1Q8TBF4 217 aaKnown RBP15.47■□□□□ 0.07
AC009404.1-202ENST00000439955 IP6K1Q92551 441 aa15.47■□□□□ 0.07
AC009404.1-202ENST00000439955 HOXD11P31277 338 aaPredicted RBP15.46■□□□□ 0.07
AC009404.1-202ENST00000439955 HTRA3P83110 453 aa15.46■□□□□ 0.07
AC009404.1-202ENST00000439955 HSP90AB2PQ58FF8 381 aa15.46■□□□□ 0.07
AC009404.1-202ENST00000439955 AMIGO3Q86WK7 504 aa15.46■□□□□ 0.07
AC009404.1-202ENST00000439955 PHF14O94880 888 aa15.45■□□□□ 0.06
AC009404.1-202ENST00000439955 FAM208AQ9UK61 1670 aaKnown RBP15.44■□□□□ 0.06
AC009404.1-202ENST00000439955 MEGF6O75095 1541 aa15.44■□□□□ 0.06
AC009404.1-202ENST00000439955 PLEKHF1Q96S99 279 aa15.44■□□□□ 0.06
AC009404.1-202ENST00000439955 RSPH6AQ9H0K4 717 aa15.44■□□□□ 0.06
AC009404.1-202ENST00000439955 CCDC146Q8IYE0 955 aa15.43■□□□□ 0.06
AC009404.1-202ENST00000439955 KDRP35968 1356 aa15.43■□□□□ 0.06
AC009404.1-202ENST00000439955 MAPK8IP3Q9UPT6 1336 aa15.43■□□□□ 0.06
AC009404.1-202ENST00000439955 APAF1O14727 1248 aa15.42■□□□□ 0.06
AC009404.1-202ENST00000439955 TOMM70O94826 608 aa15.42■□□□□ 0.06
AC009404.1-202ENST00000439955 USHBP1Q8N6Y0 703 aa15.42■□□□□ 0.06
AC009404.1-202ENST00000439955 FLAD1Q8NFF5 587 aa15.42■□□□□ 0.06
AC009404.1-202ENST00000439955 NMRK2Q9NPI5 230 aa15.42■□□□□ 0.06
AC009404.1-202ENST00000439955 NCAPD2Q15021 1401 aa15.42■□□□□ 0.06
AC009404.1-202ENST00000439955 PALLDQ8WX93 1383 aa15.41■□□□□ 0.06
AC009404.1-202ENST00000439955 NEFMP07197 916 aa15.41■□□□□ 0.06
AC009404.1-202ENST00000439955 AK7Q96M32 723 aa15.41■□□□□ 0.06
AC009404.1-202ENST00000439955 CCDC27Q2M243 656 aa15.4■□□□□ 0.06
AC009404.1-202ENST00000439955 MPRIPQ6WCQ1 1025 aa15.4■□□□□ 0.06
AC009404.1-202ENST00000439955 C5P01031 1676 aa15.4■□□□□ 0.06
AC009404.1-202ENST00000439955 ZNF521Q96K83 1311 aa15.4■□□□□ 0.06
AC009404.1-202ENST00000439955 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.39■□□□□ 0.05
AC009404.1-202ENST00000439955 PRKAR2BP31323 418 aa15.39■□□□□ 0.05
AC009404.1-202ENST00000439955 TNS4Q8IZW8 715 aa15.38■□□□□ 0.05
AC009404.1-202ENST00000439955 EYA1Q99502 592 aa15.38■□□□□ 0.05
AC009404.1-202ENST00000439955 PLEKHG2Q9H7P9 1386 aa15.37■□□□□ 0.05
AC009404.1-202ENST00000439955 HMOX1P09601 288 aa15.37■□□□□ 0.05
AC009404.1-202ENST00000439955 NBPF6Q5VWK0 638 aa15.37■□□□□ 0.05
AC009404.1-202ENST00000439955 SULT6B1Q6IMI4 303 aa15.37■□□□□ 0.05
AC009404.1-202ENST00000439955 KLRG1Q96E93 195 aa15.37■□□□□ 0.05
AC009404.1-202ENST00000439955 NBPF4Q96M43 638 aa15.37■□□□□ 0.05
AC009404.1-202ENST00000439955 BCS1LQ9Y276 419 aa15.37■□□□□ 0.05
AC009404.1-202ENST00000439955 ARHGAP27Q6ZUM4 889 aa15.36■□□□□ 0.05
AC009404.1-202ENST00000439955 A0A0G2JLW4 131 aa15.35■□□□□ 0.05
AC009404.1-202ENST00000439955 TMPOP42166 694 aaKnown RBP15.35■□□□□ 0.05
AC009404.1-202ENST00000439955 RAPGEF4Q8WZA2 1011 aa15.35■□□□□ 0.05
AC009404.1-202ENST00000439955 C4BP0C0L5 1744 aa15.34■□□□□ 0.05
AC009404.1-202ENST00000439955 TOGARAM1Q9Y4F4 1720 aa15.34■□□□□ 0.05
AC009404.1-202ENST00000439955 RGPD2P0DJD1 1756 aa15.34■□□□□ 0.05
AC009404.1-202ENST00000439955 NFE2L2Q16236 605 aa15.34■□□□□ 0.05
AC009404.1-202ENST00000439955 AEBP1Q8IUX7 1158 aa15.34■□□□□ 0.05
AC009404.1-202ENST00000439955 WWC1Q8IX03 1113 aa15.34■□□□□ 0.05
AC009404.1-202ENST00000439955 PXDNLA1KZ92 1463 aa15.33■□□□□ 0.05
AC009404.1-202ENST00000439955 CICQ96RK0 1608 aaPredicted RBP15.33■□□□□ 0.04
AC009404.1-202ENST00000439955 MMP10P09238 476 aa15.33■□□□□ 0.04
AC009404.1-202ENST00000439955 TATP17735 454 aaPredicted RBP15.33■□□□□ 0.04
AC009404.1-202ENST00000439955 PRELPP51888 382 aa15.33■□□□□ 0.04
AC009404.1-202ENST00000439955 GOLGA2Q08379 1002 aa15.33■□□□□ 0.04
AC009404.1-202ENST00000439955 WDR63Q8IWG1 891 aa15.33■□□□□ 0.04
AC009404.1-202ENST00000439955 C16orf71Q8IYS4 520 aaPredicted RBP15.33■□□□□ 0.04
AC009404.1-202ENST00000439955 JMYQ8N9B5 988 aa15.33■□□□□ 0.04
AC009404.1-202ENST00000439955 LINC00116Q8NCU8 138 aa15.33■□□□□ 0.04
AC009404.1-202ENST00000439955 SALL2Q9Y467 1007 aaPredicted RBP15.33■□□□□ 0.04
AC009404.1-202ENST00000439955 WDR90Q96KV7 1748 aa15.32■□□□□ 0.04
AC009404.1-202ENST00000439955 LMOD3Q0VAK6 560 aa15.32■□□□□ 0.04
AC009404.1-202ENST00000439955 RBM46Q8TBY0 533 aaKnown RBP15.32■□□□□ 0.04
AC009404.1-202ENST00000439955 DLG5Q8TDM6 1919 aa15.32■□□□□ 0.04
AC009404.1-202ENST00000439955 GNPATO15228 680 aa15.31■□□□□ 0.04
AC009404.1-202ENST00000439955 SSFA2P28290 1259 aa15.31■□□□□ 0.04
AC009404.1-202ENST00000439955 PIGBQ92521 554 aa15.31■□□□□ 0.04
AC009404.1-202ENST00000439955 SMARCC1Q92922 1105 aaPredicted RBP15.31■□□□□ 0.04
AC009404.1-202ENST00000439955 PHACTR3Q96KR7 559 aa15.31■□□□□ 0.04
AC009404.1-202ENST00000439955 PCDH11XQ9BZA7 1347 aa15.31■□□□□ 0.04
AC009404.1-202ENST00000439955 PCDH11YQ9BZA8 1340 aa15.31■□□□□ 0.04
AC009404.1-202ENST00000439955 TAF1LQ8IZX4 1826 aa15.31■□□□□ 0.04
AC009404.1-202ENST00000439955 CYP27B1O15528 508 aa15.3■□□□□ 0.04
AC009404.1-202ENST00000439955 RIPK4P57078 832 aa15.3■□□□□ 0.04
AC009404.1-202ENST00000439955 IL16Q14005 1332 aa15.3■□□□□ 0.04
AC009404.1-202ENST00000439955 C9orf131Q5VYM1 1079 aa15.3■□□□□ 0.04
AC009404.1-202ENST00000439955 GAS2L2Q8NHY3 880 aa15.3■□□□□ 0.04
AC009404.1-202ENST00000439955 RRP7AQ9Y3A4 280 aaKnown RBP15.3■□□□□ 0.04
AC009404.1-202ENST00000439955 E9PSI1 815 aa15.29■□□□□ 0.04
AC009404.1-202ENST00000439955 DPEP1P16444 411 aa15.29■□□□□ 0.04
AC009404.1-202ENST00000439955 HMGB2P26583 209 aaKnown RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms