RNA–Protein interactions for RNA: ENST00000439259.1

AC012494.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC012494.1, Length 1,103 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012494.1-201ENST00000439259 IP6K1Q92551 441 aa11.36□□□□□ -0.59
AC012494.1-201ENST00000439259 ACSBG1Q96GR2 724 aa11.36□□□□□ -0.59
AC012494.1-201ENST00000439259 COG3Q96JB2 828 aa11.36□□□□□ -0.59
AC012494.1-201ENST00000439259 LTN1O94822 1766 aa11.36□□□□□ -0.59
AC012494.1-201ENST00000439259 ABCC6O95255 1503 aa11.35□□□□□ -0.59
AC012494.1-201ENST00000439259 SBF2Q86WG5 1849 aa11.35□□□□□ -0.59
AC012494.1-201ENST00000439259 C11orf95C9JLR9 678 aaPredicted RBP11.35□□□□□ -0.59
AC012494.1-201ENST00000439259 PLSCR1O15162 318 aa11.35□□□□□ -0.59
AC012494.1-201ENST00000439259 HOXB3P14651 431 aaPredicted RBP11.35□□□□□ -0.59
AC012494.1-201ENST00000439259 IL2RBP14784 551 aa11.35□□□□□ -0.59
AC012494.1-201ENST00000439259 NBPF14Q5TI25 921 aa11.35□□□□□ -0.59
AC012494.1-201ENST00000439259 ZNF710Q8N1W2 664 aa11.35□□□□□ -0.59
AC012494.1-201ENST00000439259 GGNBP2Q9H3C7 697 aa11.35□□□□□ -0.59
AC012494.1-201ENST00000439259 ANO8Q9HCE9 1232 aaPredicted RBP11.35□□□□□ -0.59
AC012494.1-201ENST00000439259 ANKRD36BQ8N2N9 1353 aa11.35□□□□□ -0.59
AC012494.1-201ENST00000439259 NINLQ9Y2I6 1382 aa11.35□□□□□ -0.59
AC012494.1-201ENST00000439259 TNS2Q63HR2 1409 aa11.35□□□□□ -0.59
AC012494.1-201ENST00000439259 MAP3K19Q56UN5 1328 aa11.35□□□□□ -0.59
AC012494.1-201ENST00000439259 FYB1O15117 783 aa11.34□□□□□ -0.59
AC012494.1-201ENST00000439259 RRS1Q15050 365 aaKnown RBP11.34□□□□□ -0.59
AC012494.1-201ENST00000439259 FBXO22Q8NEZ5 403 aa11.34□□□□□ -0.59
AC012494.1-201ENST00000439259 RGL2O15211 777 aa11.33□□□□□ -0.6
AC012494.1-201ENST00000439259 SLC24A1O60721 1099 aa11.33□□□□□ -0.6
AC012494.1-201ENST00000439259 HOXC9P31274 260 aa11.33□□□□□ -0.6
AC012494.1-201ENST00000439259 AMPHP49418 695 aa11.33□□□□□ -0.6
AC012494.1-201ENST00000439259 PDGFDQ9GZP0 370 aaPredicted RBP11.33□□□□□ -0.6
AC012494.1-201ENST00000439259 BCL9O00512 1426 aa11.33□□□□□ -0.6
AC012494.1-201ENST00000439259 ZSWIM6Q9HCJ5 1215 aa11.32□□□□□ -0.6
AC012494.1-201ENST00000439259 HOXB1P14653 301 aaPredicted RBP11.31□□□□□ -0.6
AC012494.1-201ENST00000439259 TXNRD1Q16881 649 aa11.31□□□□□ -0.6
AC012494.1-201ENST00000439259 DDX54Q8TDD1 881 aaKnown RBP11.31□□□□□ -0.6
AC012494.1-201ENST00000439259 CARD14Q9BXL6 1004 aa11.31□□□□□ -0.6
AC012494.1-201ENST00000439259 USHBP1Q8N6Y0 703 aa11.3□□□□□ -0.6
AC012494.1-201ENST00000439259 MFRPQ9BY79 579 aa11.3□□□□□ -0.6
AC012494.1-201ENST00000439259 NBPF6Q5VWK0 638 aa11.29□□□□□ -0.6
AC012494.1-201ENST00000439259 NBPF4Q96M43 638 aa11.29□□□□□ -0.6
AC012494.1-201ENST00000439259 POLR3GLQ9BT43 218 aa11.29□□□□□ -0.6
AC012494.1-201ENST00000439259 TIMELESSQ9UNS1 1208 aa11.29□□□□□ -0.6
AC012494.1-201ENST00000439259 CDCA8Q53HL2 280 aa11.28□□□□□ -0.6
AC012494.1-201ENST00000439259 HSP90AB2PQ58FF8 381 aa11.28□□□□□ -0.6
AC012494.1-201ENST00000439259 HS3ST6Q96QI5 342 aa11.28□□□□□ -0.6
AC012494.1-201ENST00000439259 SPON1Q9HCB6 807 aa11.28□□□□□ -0.6
AC012494.1-201ENST00000439259 CLSPNQ9HAW4 1339 aa11.28□□□□□ -0.6
AC012494.1-201ENST00000439259 RGPD3A6NKT7 1758 aaPredicted RBP11.28□□□□□ -0.6
AC012494.1-201ENST00000439259 RGPD4Q7Z3J3 1758 aa11.28□□□□□ -0.6
AC012494.1-201ENST00000439259 NSD3Q9BZ95 1437 aa11.27□□□□□ -0.6
AC012494.1-201ENST00000439259 RGPD2P0DJD1 1756 aa11.27□□□□□ -0.61
AC012494.1-201ENST00000439259 MEGF6O75095 1541 aa11.27□□□□□ -0.61
AC012494.1-201ENST00000439259 ZBTB7AO95365 584 aa11.27□□□□□ -0.61
AC012494.1-201ENST00000439259 TMEM92Q6UXU6 159 aa11.27□□□□□ -0.61
AC012494.1-201ENST00000439259 NHSQ6T4R5 1651 aa11.27□□□□□ -0.61
AC012494.1-201ENST00000439259 FAM205CA6NFA0 338 aa11.26□□□□□ -0.61
AC012494.1-201ENST00000439259 KCNQ4P56696 695 aa11.26□□□□□ -0.61
AC012494.1-201ENST00000439259 SLC15A2Q16348 729 aa11.26□□□□□ -0.61
AC012494.1-201ENST00000439259 CCER1Q8TC90 406 aaPredicted RBP11.26□□□□□ -0.61
AC012494.1-201ENST00000439259 SYTL4Q96C24 671 aaPredicted RBP11.26□□□□□ -0.61
AC012494.1-201ENST00000439259 LRRC4BQ9NT99 713 aa11.26□□□□□ -0.61
AC012494.1-201ENST00000439259 STK32BQ9NY57 414 aa11.26□□□□□ -0.61
AC012494.1-201ENST00000439259 PPP1R1BQ9UD71 204 aaPredicted RBP11.26□□□□□ -0.61
AC012494.1-201ENST00000439259 EMILIN1Q9Y6C2 1016 aa11.26□□□□□ -0.61
AC012494.1-201ENST00000439259 MYOM1P52179 1685 aa11.26□□□□□ -0.61
AC012494.1-201ENST00000439259 FAM208AQ9UK61 1670 aaKnown RBP11.26□□□□□ -0.61
AC012494.1-201ENST00000439259 RTL1A6NKG5 1358 aa11.26□□□□□ -0.61
AC012494.1-201ENST00000439259 HSPA5P11021 654 aaKnown RBP11.25□□□□□ -0.61
AC012494.1-201ENST00000439259 PRIM1P49642 420 aaKnown RBP11.25□□□□□ -0.61
AC012494.1-201ENST00000439259 ZCRB1Q8TBF4 217 aaKnown RBP11.25□□□□□ -0.61
AC012494.1-201ENST00000439259 PPM1GO15355 546 aaPredicted RBP11.24□□□□□ -0.61
AC012494.1-201ENST00000439259 ZNF827Q17R98 1081 aa11.24□□□□□ -0.61
AC012494.1-201ENST00000439259 KAT6BQ8WYB5 2073 aa11.24□□□□□ -0.61
AC012494.1-201ENST00000439259 CASZ1Q86V15 1759 aa11.23□□□□□ -0.61
AC012494.1-201ENST00000439259 BTAF1O14981 1849 aa11.23□□□□□ -0.61
AC012494.1-201ENST00000439259 KIF20BQ96Q89 1820 aa11.23□□□□□ -0.61
AC012494.1-201ENST00000439259 INSRP06213 1382 aa11.23□□□□□ -0.61
AC012494.1-201ENST00000439259 FLT4P35916 1363 aa11.23□□□□□ -0.61
AC012494.1-201ENST00000439259 NSD2O96028 1365 aa11.22□□□□□ -0.61
AC012494.1-201ENST00000439259 PTGER2P43116 358 aa11.22□□□□□ -0.61
AC012494.1-201ENST00000439259 TNNT2P45379 298 aaPredicted RBP11.22□□□□□ -0.61
AC012494.1-201ENST00000439259 EIF4G2P78344 907 aaKnown RBP eCLIP11.22□□□□□ -0.61
AC012494.1-201ENST00000439259 SMG6Q86US8 1419 aaKnown RBP11.22□□□□□ -0.61
AC012494.1-201ENST00000439259 RAPGEF4Q8WZA2 1011 aa11.22□□□□□ -0.61
AC012494.1-201ENST00000439259 SHANK3Q9BYB0 1731 aa11.22□□□□□ -0.61
AC012494.1-201ENST00000439259 CGNL1Q0VF96 1302 aa11.21□□□□□ -0.61
AC012494.1-201ENST00000439259 TATP17735 454 aaPredicted RBP11.21□□□□□ -0.61
AC012494.1-201ENST00000439259 HS6ST3Q8IZP7 471 aa11.2□□□□□ -0.62
AC012494.1-201ENST00000439259 POLKQ9UBT6 870 aa11.2□□□□□ -0.62
AC012494.1-201ENST00000439259 DOT1LQ8TEK3 1739 aa11.2□□□□□ -0.62
AC012494.1-201ENST00000439259 PAPPAQ13219 1627 aa11.2□□□□□ -0.62
AC012494.1-201ENST00000439259 CYP27B1O15528 508 aa11.19□□□□□ -0.62
AC012494.1-201ENST00000439259 SPNS2Q8IVW8 549 aa11.19□□□□□ -0.62
AC012494.1-201ENST00000439259 PANK3Q9H999 370 aa11.19□□□□□ -0.62
AC012494.1-201ENST00000439259 KIF24Q5T7B8 1368 aa11.18□□□□□ -0.62
AC012494.1-201ENST00000439259 SLC27A3Q5K4L6 730 aa11.18□□□□□ -0.62
AC012494.1-201ENST00000439259 EYA1Q99502 592 aa11.18□□□□□ -0.62
AC012494.1-201ENST00000439259 FHDC1Q9C0D6 1143 aaPredicted RBP11.18□□□□□ -0.62
AC012494.1-201ENST00000439259 MTFR1LQ9H019 292 aa11.18□□□□□ -0.62
AC012494.1-201ENST00000439259 WASHC2AQ641Q2 1341 aa11.17□□□□□ -0.62
AC012494.1-201ENST00000439259 PNPLA7Q6ZV29 1317 aa11.17□□□□□ -0.62
AC012494.1-201ENST00000439259 PCDH11XQ9BZA7 1347 aa11.17□□□□□ -0.62
AC012494.1-201ENST00000439259 PCDH11YQ9BZA8 1340 aa11.17□□□□□ -0.62
AC012494.1-201ENST00000439259 UTRNP46939 3433 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms