RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 HSP90AB2PQ58FF8 381 aa18.95■□□□□ 0.62
DHFR-201ENST00000439211 TSPYL1Q9H0U9 437 aa18.95■□□□□ 0.62
DHFR-201ENST00000439211 GABPB1Q06547 395 aaPredicted RBP18.94■□□□□ 0.62
DHFR-201ENST00000439211 ZNF692Q9BU19 519 aaPredicted RBP18.94■□□□□ 0.62
DHFR-201ENST00000439211 GOLGA6L6A8MZA4 724 aa18.94■□□□□ 0.62
DHFR-201ENST00000439211 PDLIM2Q96JY6 352 aa18.94■□□□□ 0.62
DHFR-201ENST00000439211 TULP4Q9NRJ4 1543 aa18.94■□□□□ 0.62
DHFR-201ENST00000439211 MBD3O95983 291 aa18.94■□□□□ 0.62
DHFR-201ENST00000439211 PIBF1Q8WXW3 757 aa18.94■□□□□ 0.62
DHFR-201ENST00000439211 KIAA1210Q9ULL0 1709 aa18.93■□□□□ 0.62
DHFR-201ENST00000439211 MLH3Q9UHC1 1453 aa18.93■□□□□ 0.62
DHFR-201ENST00000439211 NPHP1O15259 732 aa18.93■□□□□ 0.62
DHFR-201ENST00000439211 SLC26A8Q96RN1 970 aa18.93■□□□□ 0.62
DHFR-201ENST00000439211 EIF2S2P20042 333 aaKnown RBP18.93■□□□□ 0.62
DHFR-201ENST00000439211 ERC2O15083 957 aa18.93■□□□□ 0.62
DHFR-201ENST00000439211 GSPT1P15170 499 aaKnown RBP18.93■□□□□ 0.62
DHFR-201ENST00000439211 BRD2P25440 801 aaKnown RBP18.93■□□□□ 0.62
DHFR-201ENST00000439211 DCTPP1Q9H773 170 aa18.93■□□□□ 0.62
DHFR-201ENST00000439211 NLRP1Q9C000 1473 aa18.92■□□□□ 0.62
DHFR-201ENST00000439211 TEX2Q8IWB9 1127 aa18.92■□□□□ 0.62
DHFR-201ENST00000439211 GLI2P10070 1586 aa18.92■□□□□ 0.62
DHFR-201ENST00000439211 MROH2AA6NES4 1674 aa18.91■□□□□ 0.62
DHFR-201ENST00000439211 EIF4A2Q14240 407 aaKnown RBP18.91■□□□□ 0.62
DHFR-201ENST00000439211 NRXN1Q9ULB1 1477 aa18.91■□□□□ 0.62
DHFR-201ENST00000439211 LMOD2Q6P5Q4 547 aa18.91■□□□□ 0.62
DHFR-201ENST00000439211 ANKRD44Q8N8A2 993 aa18.91■□□□□ 0.62
DHFR-201ENST00000439211 TMX1Q9H3N1 280 aa18.91■□□□□ 0.62
DHFR-201ENST00000439211 ZFYVE9O95405 1425 aa18.9■□□□□ 0.62
DHFR-201ENST00000439211 ZGPATQ8N5A5 531 aaKnown RBP18.9■□□□□ 0.62
DHFR-201ENST00000439211 ABCC3O15438 1527 aa18.9■□□□□ 0.62
DHFR-201ENST00000439211 FOXO3O43524 673 aa18.9■□□□□ 0.62
DHFR-201ENST00000439211 SETBP1Q9Y6X0 1596 aa18.9■□□□□ 0.62
DHFR-201ENST00000439211 GNAI2P04899 355 aa18.9■□□□□ 0.62
DHFR-201ENST00000439211 KRT222Q8N1A0 295 aa18.9■□□□□ 0.62
DHFR-201ENST00000439211 ADGRB1O14514 1584 aa18.89■□□□□ 0.62
DHFR-201ENST00000439211 VWDEQ8N2E2 1590 aa18.89■□□□□ 0.62
DHFR-201ENST00000439211 ADCY5O95622 1261 aa18.89■□□□□ 0.61
DHFR-201ENST00000439211 IL1RAPL2Q9NP60 686 aa18.89■□□□□ 0.61
DHFR-201ENST00000439211 DEPDC5O75140 1603 aa18.89■□□□□ 0.61
DHFR-201ENST00000439211 GTF2F1P35269 517 aaKnown RBP eCLIP18.89■□□□□ 0.61
DHFR-201ENST00000439211 CEP85Q6P2H3 762 aa18.89■□□□□ 0.61
DHFR-201ENST00000439211 UPF3BQ9BZI7 483 aaKnown RBP18.89■□□□□ 0.61
DHFR-201ENST00000439211 CCDC112Q8NEF3 446 aa18.89■□□□□ 0.61
DHFR-201ENST00000439211 CHMP4CQ96CF2 233 aa18.89■□□□□ 0.61
DHFR-201ENST00000439211 LMBRD1Q9NUN5 540 aa18.89■□□□□ 0.61
DHFR-201ENST00000439211 KIDINS220Q9ULH0 1771 aa18.88■□□□□ 0.61
DHFR-201ENST00000439211 MAP4K4O95819 1239 aaPredicted RBP18.88■□□□□ 0.61
DHFR-201ENST00000439211 ABCC4O15439 1325 aa18.88■□□□□ 0.61
DHFR-201ENST00000439211 EID1Q9Y6B2 187 aa18.88■□□□□ 0.61
DHFR-201ENST00000439211 NLRP6P59044 892 aa18.87■□□□□ 0.61
DHFR-201ENST00000439211 IBTKQ9P2D0 1353 aaPredicted RBP18.87■□□□□ 0.61
DHFR-201ENST00000439211 HECW2Q9P2P5 1572 aa18.87■□□□□ 0.61
DHFR-201ENST00000439211 USP26Q9BXU7 913 aa18.87■□□□□ 0.61
DHFR-201ENST00000439211 PKP1Q13835 747 aa18.87■□□□□ 0.61
DHFR-201ENST00000439211 TMEM63CQ9P1W3 806 aa18.87■□□□□ 0.61
DHFR-201ENST00000439211 HDAC5Q9UQL6 1122 aa18.86■□□□□ 0.61
DHFR-201ENST00000439211 GTF2A1P52655 376 aaPredicted RBP18.86■□□□□ 0.61
DHFR-201ENST00000439211 C16orf45Q96MC5 204 aaPredicted RBP18.86■□□□□ 0.61
DHFR-201ENST00000439211 LRRCC1Q9C099 1032 aa18.86■□□□□ 0.61
DHFR-201ENST00000439211 G2E3Q7L622 706 aa18.86■□□□□ 0.61
DHFR-201ENST00000439211 CHAMP1Q96JM3 812 aa18.86■□□□□ 0.61
DHFR-201ENST00000439211 GPATCH11Q8N954 259 aa18.85■□□□□ 0.61
DHFR-201ENST00000439211 CWC22Q9HCG8 908 aaKnown RBP18.85■□□□□ 0.61
DHFR-201ENST00000439211 ACEP12821 1306 aa18.85■□□□□ 0.61
DHFR-201ENST00000439211 RIMS2Q9UQ26 1411 aa18.85■□□□□ 0.61
DHFR-201ENST00000439211 MROH1Q8NDA8 1641 aa18.85■□□□□ 0.61
DHFR-201ENST00000439211 CCT4P50991 539 aaKnown RBP18.85■□□□□ 0.61
DHFR-201ENST00000439211 KIF2CQ99661 725 aa18.85■□□□□ 0.61
DHFR-201ENST00000439211 NEO1Q92859 1461 aa18.85■□□□□ 0.61
DHFR-201ENST00000439211 SURF6O75683 361 aaKnown RBP18.84■□□□□ 0.61
DHFR-201ENST00000439211 PATL2C9JE40 543 aaKnown RBP18.84■□□□□ 0.61
DHFR-201ENST00000439211 CEBPAP49715 358 aaPredicted RBP18.84■□□□□ 0.61
DHFR-201ENST00000439211 TEX35Q5T0J7 233 aa18.84■□□□□ 0.61
DHFR-201ENST00000439211 UBTFL1P0CB47 393 aaPredicted RBP18.84■□□□□ 0.61
DHFR-201ENST00000439211 RGS22Q8NE09 1264 aa18.83■□□□□ 0.61
DHFR-201ENST00000439211 GNAI3P08754 354 aa18.83■□□□□ 0.61
DHFR-201ENST00000439211 TOMM22Q9NS69 142 aa18.83■□□□□ 0.61
DHFR-201ENST00000439211 MSH6P52701 1360 aa18.83■□□□□ 0.6
DHFR-201ENST00000439211 HTATSF1O43719 755 aaKnown RBP18.82■□□□□ 0.6
DHFR-201ENST00000439211 LMTK2Q8IWU2 1503 aa18.82■□□□□ 0.6
DHFR-201ENST00000439211 PDE1AP54750 535 aa18.82■□□□□ 0.6
DHFR-201ENST00000439211 CCDC30Q5VVM6 783 aa18.82■□□□□ 0.6
DHFR-201ENST00000439211 GOLGA6L1Q8N7Z2 621 aa18.82■□□□□ 0.6
DHFR-201ENST00000439211 ZNF853P0CG23 659 aa18.82■□□□□ 0.6
DHFR-201ENST00000439211 TRHP20396 242 aaPredicted RBP18.82■□□□□ 0.6
DHFR-201ENST00000439211 RSPH14Q9UHP6 348 aa18.82■□□□□ 0.6
DHFR-201ENST00000439211 SHPRHQ149N8 1683 aa18.82■□□□□ 0.6
DHFR-201ENST00000439211 TPD52L1Q16890 204 aaPredicted RBP18.81■□□□□ 0.6
DHFR-201ENST00000439211 NUTM1Q86Y26 1132 aa18.81■□□□□ 0.6
DHFR-201ENST00000439211 GDPD2Q9HCC8 539 aa18.81■□□□□ 0.6
DHFR-201ENST00000439211 FAM135BQ49AJ0 1406 aa18.81■□□□□ 0.6
DHFR-201ENST00000439211 GPT2Q8TD30 523 aa18.81■□□□□ 0.6
DHFR-201ENST00000439211 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.81■□□□□ 0.63e-19■□□□□ 10.9
DHFR-201ENST00000439211 V9GYY5 206 aaPredicted RBP18.81■□□□□ 0.6
DHFR-201ENST00000439211 TTC21BQ7Z4L5 1316 aa18.81■□□□□ 0.6
DHFR-201ENST00000439211 MX1P20591 662 aa18.81■□□□□ 0.6
DHFR-201ENST00000439211 BRPF1P55201 1214 aaPredicted RBP18.81■□□□□ 0.6
DHFR-201ENST00000439211 FAM184AQ8NB25 1140 aa18.81■□□□□ 0.6
DHFR-201ENST00000439211 LARP6Q9BRS8 491 aaKnown RBP18.81■□□□□ 0.6
DHFR-201ENST00000439211 PTPRCP08575 1304 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms