RNA–Protein interactions for RNA: ENST00000438191.1

RPE-209, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-209ENST00000438191 TSKSQ9UJT2 592 aa13.59□□□□□ -0.23
RPE-209ENST00000438191 BEGAINQ9BUH8 593 aa13.58□□□□□ -0.24
RPE-209ENST00000438191 ITGBL1O95965 494 aaPredicted RBP13.57□□□□□ -0.24
RPE-209ENST00000438191 DPY19L2Q6NUT2 758 aa13.57□□□□□ -0.24
RPE-209ENST00000438191 NLGN1Q8N2Q7 840 aa13.57□□□□□ -0.24
RPE-209ENST00000438191 LTN1O94822 1766 aa13.57□□□□□ -0.24
RPE-209ENST00000438191 TTC21BQ7Z4L5 1316 aa13.56□□□□□ -0.24
RPE-209ENST00000438191 MAP2P11137 1827 aaKnown RBP13.55□□□□□ -0.24
RPE-209ENST00000438191 SRPK2P78362 688 aaKnown RBP13.55□□□□□ -0.24
RPE-209ENST00000438191 ZCRB1Q8TBF4 217 aaKnown RBP13.55□□□□□ -0.24
RPE-209ENST00000438191 CABP1Q9NZU7 370 aa13.55□□□□□ -0.24
RPE-209ENST00000438191 ZNF219Q9P2Y4 722 aaPredicted RBP13.55□□□□□ -0.24
RPE-209ENST00000438191 GNPATO15228 680 aa13.54□□□□□ -0.24
RPE-209ENST00000438191 TMF1P82094 1093 aa13.54□□□□□ -0.24
RPE-209ENST00000438191 LINC00116Q8NCU8 138 aa13.54□□□□□ -0.24
RPE-209ENST00000438191 CABP2Q9NPB3 220 aa13.54□□□□□ -0.24
RPE-209ENST00000438191 PARP3Q9Y6F1 533 aa13.54□□□□□ -0.24
RPE-209ENST00000438191 FAM208AQ9UK61 1670 aaKnown RBP13.53□□□□□ -0.24
RPE-209ENST00000438191 CHRNA5P30532 468 aa13.53□□□□□ -0.24
RPE-209ENST00000438191 LDHDQ86WU2 507 aa13.53□□□□□ -0.24
RPE-209ENST00000438191 LOC105371045A0A1W2PR82 267 aa13.52□□□□□ -0.25
RPE-209ENST00000438191 FXR1P51114 621 aaKnown RBP eCLIP13.52□□□□□ -0.25
RPE-209ENST00000438191 DICER1Q9UPY3 1922 aaKnown RBP13.52□□□□□ -0.25
RPE-209ENST00000438191 SMARCC1Q92922 1105 aaPredicted RBP13.51□□□□□ -0.25
RPE-209ENST00000438191 ITGB4P16144 1822 aa13.5□□□□□ -0.25
RPE-209ENST00000438191 ADAMTS7Q9UKP4 1686 aa13.5□□□□□ -0.25
RPE-209ENST00000438191 TTC21AQ8NDW8 1320 aa13.5□□□□□ -0.25
RPE-209ENST00000438191 MPRIPQ6WCQ1 1025 aa13.5□□□□□ -0.25
RPE-209ENST00000438191 CAPNS2Q96L46 248 aa13.5□□□□□ -0.25
RPE-209ENST00000438191 GPR101Q96P66 508 aaPredicted RBP13.5□□□□□ -0.25
RPE-209ENST00000438191 MEGF6O75095 1541 aa13.49□□□□□ -0.25
RPE-209ENST00000438191 NFKBIEO00221 500 aa13.49□□□□□ -0.25
RPE-209ENST00000438191 GYS1P13807 737 aa13.49□□□□□ -0.25
RPE-209ENST00000438191 NBPF15Q8N660 670 aa13.49□□□□□ -0.25
RPE-209ENST00000438191 ABT1Q9ULW3 272 aaKnown RBP13.49□□□□□ -0.25
RPE-209ENST00000438191 SCN4AP35499 1836 aa13.48□□□□□ -0.25
RPE-209ENST00000438191 ADAMTSL1Q8N6G6 1762 aa13.48□□□□□ -0.25
RPE-209ENST00000438191 CA12O43570 354 aa13.47□□□□□ -0.25
RPE-209ENST00000438191 DDNO94850 711 aaPredicted RBP13.47□□□□□ -0.25
RPE-209ENST00000438191 ECE1P42892 770 aa13.47□□□□□ -0.25
RPE-209ENST00000438191 MPHOSPH9Q99550 1183 aa13.47□□□□□ -0.25
RPE-209ENST00000438191 RGPD2P0DJD1 1756 aa13.46□□□□□ -0.25
RPE-209ENST00000438191 LOC102724428A0A0B4J2F2 783 aa13.46□□□□□ -0.25
RPE-209ENST00000438191 SIK1P57059 783 aa13.46□□□□□ -0.25
RPE-209ENST00000438191 ITPK1Q13572 414 aa13.46□□□□□ -0.25
RPE-209ENST00000438191 TRAPPC3LQ5T215 181 aa13.46□□□□□ -0.25
RPE-209ENST00000438191 CYP4F22Q6NT55 531 aa13.46□□□□□ -0.25
RPE-209ENST00000438191 TAF1DQ9H5J8 278 aaPredicted RBP13.46□□□□□ -0.25
RPE-209ENST00000438191 PITPNM2Q9BZ72 1349 aa13.45□□□□□ -0.26
RPE-209ENST00000438191 ARHGEF1Q92888 912 aaKnown RBP13.45□□□□□ -0.26
RPE-209ENST00000438191 ZNF692Q9BU19 519 aaPredicted RBP13.45□□□□□ -0.26
RPE-209ENST00000438191 KDM2AQ9Y2K7 1162 aa13.45□□□□□ -0.26
RPE-209ENST00000438191 DLEC1Q9Y238 1755 aa13.45□□□□□ -0.26
RPE-209ENST00000438191 IQCA1LA6NCM1 817 aa13.44□□□□□ -0.26
RPE-209ENST00000438191 MAP2K2P36507 400 aa13.44□□□□□ -0.26
RPE-209ENST00000438191 GRM1Q13255 1194 aa13.44□□□□□ -0.26
RPE-209ENST00000438191 NBPF1Q3BBV0 1214 aa13.44□□□□□ -0.26
RPE-209ENST00000438191 SLC17A8Q8NDX2 589 aa13.44□□□□□ -0.26
RPE-209ENST00000438191 USP31Q70CQ4 1352 aa13.44□□□□□ -0.26
RPE-209ENST00000438191 AOC2O75106 756 aa13.43□□□□□ -0.26
RPE-209ENST00000438191 ERFEQ4G0M1 354 aa13.43□□□□□ -0.26
RPE-209ENST00000438191 PAXIP1Q6ZW49 1069 aaPredicted RBP13.43□□□□□ -0.26
RPE-209ENST00000438191 LTV1Q96GA3 475 aaPredicted RBP13.43□□□□□ -0.26
RPE-209ENST00000438191 RTCBQ9Y3I0 505 aaKnown RBP13.43□□□□□ -0.26
RPE-209ENST00000438191 DDR1Q08345 913 aa13.42□□□□□ -0.26
RPE-209ENST00000438191 CNTROBQ8N137 903 aa13.42□□□□□ -0.26
RPE-209ENST00000438191 EAPPQ56P03 285 aaPredicted RBP13.41□□□□□ -0.26
RPE-209ENST00000438191 PIGBQ92521 554 aa13.41□□□□□ -0.26
RPE-209ENST00000438191 IP6K1Q92551 441 aa13.41□□□□□ -0.26
RPE-209ENST00000438191 L3MBTL3Q96JM7 780 aaPredicted RBP13.41□□□□□ -0.26
RPE-209ENST00000438191 CLEC11AQ9Y240 323 aa13.41□□□□□ -0.26
RPE-209ENST00000438191 FER1L6Q2WGJ9 1857 aa13.4□□□□□ -0.26
RPE-209ENST00000438191 ADRA2BP18089 450 aa13.4□□□□□ -0.26
RPE-209ENST00000438191 ATP6V1AP38606 617 aa13.4□□□□□ -0.26
RPE-209ENST00000438191 MAP1SQ66K74 1059 aaPredicted RBP13.4□□□□□ -0.26
RPE-209ENST00000438191 RFC4P35249 363 aa13.39□□□□□ -0.27
RPE-209ENST00000438191 DCAF11Q8TEB1 546 aa13.39□□□□□ -0.27
RPE-209ENST00000438191 DDX21Q9NR30 783 aaKnown RBP eCLIP13.39□□□□□ -0.27
RPE-209ENST00000438191 CGNL1Q0VF96 1302 aa13.39□□□□□ -0.27
RPE-209ENST00000438191 BRPF1P55201 1214 aaPredicted RBP13.38□□□□□ -0.27
RPE-209ENST00000438191 TTLL6Q8N841 843 aa13.38□□□□□ -0.27
RPE-209ENST00000438191 MON2Q7Z3U7 1717 aa13.38□□□□□ -0.27
RPE-209ENST00000438191 CUL9Q8IWT3 2517 aa13.38□□□□□ -0.27
RPE-209ENST00000438191 TRPM7Q96QT4 1865 aa13.37□□□□□ -0.27
RPE-209ENST00000438191 PCDH11XQ9BZA7 1347 aa13.37□□□□□ -0.27
RPE-209ENST00000438191 PCDH11YQ9BZA8 1340 aa13.37□□□□□ -0.27
RPE-209ENST00000438191 CD163L1Q9NR16 1453 aa13.36□□□□□ -0.27
RPE-209ENST00000438191 KTN1Q86UP2 1357 aaKnown RBP13.36□□□□□ -0.27
RPE-209ENST00000438191 FKBP8Q14318 412 aa13.36□□□□□ -0.27
RPE-209ENST00000438191 STAC3Q96MF2 364 aa13.36□□□□□ -0.27
RPE-209ENST00000438191 CENPJQ9HC77 1338 aaPredicted RBP13.36□□□□□ -0.27
RPE-209ENST00000438191 POLRMTO00411 1230 aaKnown RBP13.35□□□□□ -0.27
RPE-209ENST00000438191 CYP27B1O15528 508 aa13.35□□□□□ -0.27
RPE-209ENST00000438191 RPS6KA4O75676 772 aa13.35□□□□□ -0.27
RPE-209ENST00000438191 FMR1Q06787 632 aaKnown RBP eCLIP13.35□□□□□ -0.27
RPE-209ENST00000438191 NME9Q86XW9 330 aa13.35□□□□□ -0.27
RPE-209ENST00000438191 TLL2Q9Y6L7 1015 aa13.35□□□□□ -0.27
RPE-209ENST00000438191 COL5A3P25940 1745 aaPredicted RBP13.35□□□□□ -0.27
RPE-209ENST00000438191 AFDNP55196 1824 aaKnown RBP13.34□□□□□ -0.27
RPE-209ENST00000438191 SMG6Q86US8 1419 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms