RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 IFNL2Q8IZJ0 200 aa19.44■□□□□ 0.7
SGCE-205ENST00000437425 BTBD11A6QL63 1104 aa19.43■□□□□ 0.7
SGCE-205ENST00000437425 ZBTB7BO15156 539 aaPredicted RBP19.43■□□□□ 0.7
SGCE-205ENST00000437425 LGR6Q9HBX8 967 aa19.43■□□□□ 0.7
SGCE-205ENST00000437425 MPRIPQ6WCQ1 1025 aa19.42■□□□□ 0.7
SGCE-205ENST00000437425 COL5A2P05997 1499 aaPredicted RBP19.42■□□□□ 0.7
SGCE-205ENST00000437425 ROBO1Q9Y6N7 1651 aa19.42■□□□□ 0.7
SGCE-205ENST00000437425 PKD1L3Q7Z443 1732 aa19.42■□□□□ 0.7
SGCE-205ENST00000437425 EIF4A1P60842 406 aaKnown RBP19.41■□□□□ 0.7
SGCE-205ENST00000437425 CARD10Q9BWT7 1032 aa19.41■□□□□ 0.7
SGCE-205ENST00000437425 PHKG2P15735 406 aa19.41■□□□□ 0.7
SGCE-205ENST00000437425 MEGF6O75095 1541 aa19.4■□□□□ 0.7
SGCE-205ENST00000437425 PARP4Q9UKK3 1724 aaKnown RBP19.4■□□□□ 0.7
SGCE-205ENST00000437425 COL22A1Q8NFW1 1626 aaPredicted RBP19.4■□□□□ 0.7
SGCE-205ENST00000437425 CCT4P50991 539 aaKnown RBP19.4■□□□□ 0.7
SGCE-205ENST00000437425 TOM1L2Q6ZVM7 507 aa19.4■□□□□ 0.7
SGCE-205ENST00000437425 DCAF5Q96JK2 942 aa19.4■□□□□ 0.7
SGCE-205ENST00000437425 RGS12O14924 1447 aa19.38■□□□□ 0.69
SGCE-205ENST00000437425 HDGFL1Q5TGJ6 251 aa19.38■□□□□ 0.69
SGCE-205ENST00000437425 SIPA1L3O60292 1781 aaPredicted RBP19.38■□□□□ 0.69
SGCE-205ENST00000437425 VIRMAQ69YN4 1812 aaKnown RBP19.37■□□□□ 0.69
SGCE-205ENST00000437425 EVA1CP58658 441 aa19.37■□□□□ 0.69
SGCE-205ENST00000437425 SCN11AQ9UI33 1791 aa19.37■□□□□ 0.69
SGCE-205ENST00000437425 PCDH11XQ9BZA7 1347 aa19.36■□□□□ 0.69
SGCE-205ENST00000437425 PCDH11YQ9BZA8 1340 aa19.36■□□□□ 0.69
SGCE-205ENST00000437425 SLC52A2Q9HAB3 445 aa19.36■□□□□ 0.69
SGCE-205ENST00000437425 PXDNLA1KZ92 1463 aa19.36■□□□□ 0.69
SGCE-205ENST00000437425 MRC1P22897 1456 aa19.36■□□□□ 0.69
SGCE-205ENST00000437425 HEG1Q9ULI3 1381 aa19.36■□□□□ 0.69
SGCE-205ENST00000437425 TOM1O60784 492 aa19.35■□□□□ 0.69
SGCE-205ENST00000437425 FLIIQ13045 1269 aa19.35■□□□□ 0.69
SGCE-205ENST00000437425 SMC5Q8IY18 1101 aa19.35■□□□□ 0.69
SGCE-205ENST00000437425 GCC1Q96CN9 775 aa19.35■□□□□ 0.69
SGCE-205ENST00000437425 COL14A1Q05707 1796 aaKnown RBP19.35■□□□□ 0.69
SGCE-205ENST00000437425 IL2RBP14784 551 aa19.35■□□□□ 0.69
SGCE-205ENST00000437425 PDE4AP27815 886 aa19.34■□□□□ 0.69
SGCE-205ENST00000437425 ZCRB1Q8TBF4 217 aaKnown RBP19.34■□□□□ 0.69
SGCE-205ENST00000437425 BACH2Q9BYV9 841 aa19.34■□□□□ 0.69
SGCE-205ENST00000437425 KDM6AO15550 1401 aaPredicted RBP19.34■□□□□ 0.69
SGCE-205ENST00000437425 FKBP5Q13451 457 aaPredicted RBP19.32■□□□□ 0.68
SGCE-205ENST00000437425 RPAP2Q8IXW5 612 aaPredicted RBP19.32■□□□□ 0.68
SGCE-205ENST00000437425 DBF4Q9UBU7 674 aaPredicted RBP19.32■□□□□ 0.68
SGCE-205ENST00000437425 CYP27B1O15528 508 aa19.31■□□□□ 0.68
SGCE-205ENST00000437425 GIGYF1O75420 1035 aaPredicted RBP19.31■□□□□ 0.68
SGCE-205ENST00000437425 FAM161AQ3B820 660 aa19.31■□□□□ 0.68
SGCE-205ENST00000437425 PDZRN3Q9UPQ7 1066 aa19.31■□□□□ 0.68
SGCE-205ENST00000437425 NKX1-1Q15270 411 aaPredicted RBP19.3■□□□□ 0.68
SGCE-205ENST00000437425 ZNF790Q6PG37 636 aa19.3■□□□□ 0.68
SGCE-205ENST00000437425 ERVV-2B6SEH9 535 aa19.3■□□□□ 0.68
SGCE-205ENST00000437425 RGS3P49796 1198 aa19.3■□□□□ 0.68
SGCE-205ENST00000437425 PIP4K2BP78356 416 aa19.3■□□□□ 0.68
SGCE-205ENST00000437425 G2E3Q7L622 706 aa19.3■□□□□ 0.68
SGCE-205ENST00000437425 N4BP2Q86UW6 1770 aaPredicted RBP19.29■□□□□ 0.68
SGCE-205ENST00000437425 GNAI3P08754 354 aa19.29■□□□□ 0.68
SGCE-205ENST00000437425 HSPA1LP34931 641 aa19.29■□□□□ 0.68
SGCE-205ENST00000437425 CABP4P57796 275 aa19.28■□□□□ 0.68
SGCE-205ENST00000437425 LARP1Q6PKG0 1096 aaKnown RBP19.28■□□□□ 0.68
SGCE-205ENST00000437425 TTC5Q8N0Z6 440 aa19.28■□□□□ 0.68
SGCE-205ENST00000437425 STRN4Q9NRL3 753 aa19.28■□□□□ 0.68
SGCE-205ENST00000437425 HYPKQ9NX55 129 aa19.28■□□□□ 0.68
SGCE-205ENST00000437425 PHLPP1O60346 1717 aa19.27■□□□□ 0.68
SGCE-205ENST00000437425 KCNQ3O43525 872 aa19.27■□□□□ 0.68
SGCE-205ENST00000437425 EIF2S2P20042 333 aaKnown RBP19.27■□□□□ 0.68
SGCE-205ENST00000437425 NFATC2IPQ8NCF5 419 aa19.27■□□□□ 0.68
SGCE-205ENST00000437425 COL16A1Q07092 1604 aaPredicted RBP19.27■□□□□ 0.67
SGCE-205ENST00000437425 HMMRO75330 724 aa19.26■□□□□ 0.67
SGCE-205ENST00000437425 NUCB1Q02818 461 aa19.26■□□□□ 0.67
SGCE-205ENST00000437425 SLC4A10Q6U841 1118 aa19.26■□□□□ 0.67
SGCE-205ENST00000437425 ANKRD44Q8N8A2 993 aa19.26■□□□□ 0.67
SGCE-205ENST00000437425 BTG4Q9NY30 223 aa19.26■□□□□ 0.67
SGCE-205ENST00000437425 FMNL2Q96PY5 1086 aa19.25■□□□□ 0.67
SGCE-205ENST00000437425 CHPF2Q9P2E5 772 aa19.25■□□□□ 0.67
SGCE-205ENST00000437425 NECTIN2Q92692 538 aa19.25■□□□□ 0.67
SGCE-205ENST00000437425 HDAC5Q9UQL6 1122 aa19.25■□□□□ 0.67
SGCE-205ENST00000437425 DDX58O95786 925 aaKnown RBP19.24■□□□□ 0.67
SGCE-205ENST00000437425 GNAI2P04899 355 aa19.24■□□□□ 0.67
SGCE-205ENST00000437425 SNRPA1P09661 255 aaKnown RBP19.24■□□□□ 0.67
SGCE-205ENST00000437425 ANP32AP39687 249 aaKnown RBP19.24■□□□□ 0.67
SGCE-205ENST00000437425 CDCA7Q9BWT1 371 aaPredicted RBP19.24■□□□□ 0.67
SGCE-205ENST00000437425 DDX21Q9NR30 783 aaKnown RBP eCLIP19.24■□□□□ 0.67
SGCE-205ENST00000437425 ATP10DQ9P241 1426 aa19.23■□□□□ 0.67
SGCE-205ENST00000437425 F6X3S4 739 aa19.23■□□□□ 0.67
SGCE-205ENST00000437425 IBTKQ9P2D0 1353 aaPredicted RBP19.23■□□□□ 0.67
SGCE-205ENST00000437425 CEP85Q6P2H3 762 aa19.22■□□□□ 0.67
SGCE-205ENST00000437425 CHD1LQ86WJ1 897 aa19.22■□□□□ 0.67
SGCE-205ENST00000437425 MEIS3Q99687 375 aa19.22■□□□□ 0.67
SGCE-205ENST00000437425 SRCIN1Q9C0H9 1055 aa19.22■□□□□ 0.67
SGCE-205ENST00000437425 DCTPP1Q9H773 170 aa19.22■□□□□ 0.67
SGCE-205ENST00000437425 C1orf115Q9H7X2 142 aa19.22■□□□□ 0.67
SGCE-205ENST00000437425 PLCH1Q4KWH8 1693 aa19.22■□□□□ 0.67
SGCE-205ENST00000437425 SKAP1Q86WV1 359 aa19.21■□□□□ 0.67
SGCE-205ENST00000437425 SIRT2Q8IXJ6 389 aa19.21■□□□□ 0.67
SGCE-205ENST00000437425 DNAAF4Q8WXU2 420 aa19.21■□□□□ 0.67
SGCE-205ENST00000437425 ZBTB47Q9UFB7 747 aaPredicted RBP19.21■□□□□ 0.67
SGCE-205ENST00000437425 THRAP3Q9Y2W1 955 aaKnown RBP19.21■□□□□ 0.67
SGCE-205ENST00000437425 ERBB4Q15303 1308 aa19.21■□□□□ 0.67
SGCE-205ENST00000437425 C8orf34Q49A92 452 aa19.2■□□□□ 0.66
SGCE-205ENST00000437425 PHAXQ9H814 394 aaKnown RBP19.2■□□□□ 0.66
SGCE-205ENST00000437425 DISP2A7MBM2 1401 aa19.2■□□□□ 0.66
SGCE-205ENST00000437425 ALDH1L1O75891 902 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms