RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 LBX1P52954 281 aa14.83□□□□□ -0.04
CPNE1-214ENST00000435747 TMF1P82094 1093 aa14.83□□□□□ -0.04
CPNE1-214ENST00000435747 NLGN1Q8N2Q7 840 aa14.83□□□□□ -0.04
CPNE1-214ENST00000435747 MAP2P11137 1827 aaKnown RBP14.82□□□□□ -0.04
CPNE1-214ENST00000435747 GLTPD2A6NH11 291 aa14.82□□□□□ -0.04
CPNE1-214ENST00000435747 RGS19P49795 217 aa14.82□□□□□ -0.04
CPNE1-214ENST00000435747 PARP3Q9Y6F1 533 aa14.82□□□□□ -0.04
CPNE1-214ENST00000435747 LOC102724428A0A0B4J2F2 783 aa14.81□□□□□ -0.04
CPNE1-214ENST00000435747 CCDC85CA6NKD9 419 aa14.81□□□□□ -0.04
CPNE1-214ENST00000435747 SIK1P57059 783 aa14.81□□□□□ -0.04
CPNE1-214ENST00000435747 RAPGEF4Q8WZA2 1011 aa14.81□□□□□ -0.04
CPNE1-214ENST00000435747 PCDH11XQ9BZA7 1347 aa14.81□□□□□ -0.04
CPNE1-214ENST00000435747 PCDH11YQ9BZA8 1340 aa14.81□□□□□ -0.04
CPNE1-214ENST00000435747 CNTNAP1P78357 1384 aa14.81□□□□□ -0.04
CPNE1-214ENST00000435747 SBNO2Q9Y2G9 1366 aa14.81□□□□□ -0.04
CPNE1-214ENST00000435747 TATP17735 454 aaPredicted RBP14.79□□□□□ -0.04
CPNE1-214ENST00000435747 HOXC9P31274 260 aa14.79□□□□□ -0.04
CPNE1-214ENST00000435747 CCDC88AQ3V6T2 1871 aa14.79□□□□□ -0.04
CPNE1-214ENST00000435747 TRAPPC3LQ5T215 181 aa14.79□□□□□ -0.04
CPNE1-214ENST00000435747 AMPHP49418 695 aa14.78□□□□□ -0.04
CPNE1-214ENST00000435747 RASSF7Q02833 373 aa14.78□□□□□ -0.04
CPNE1-214ENST00000435747 PIGBQ92521 554 aa14.78□□□□□ -0.04
CPNE1-214ENST00000435747 USHBP1Q8N6Y0 703 aa14.77□□□□□ -0.05
CPNE1-214ENST00000435747 WBP1LQ9NX94 342 aa14.77□□□□□ -0.05
CPNE1-214ENST00000435747 RTCBQ9Y3I0 505 aaKnown RBP14.77□□□□□ -0.05
CPNE1-214ENST00000435747 VIRMAQ69YN4 1812 aaKnown RBP14.77□□□□□ -0.05
CPNE1-214ENST00000435747 TIAM2Q8IVF5 1701 aa14.77□□□□□ -0.05
CPNE1-214ENST00000435747 CD163L1Q9NR16 1453 aa14.76□□□□□ -0.05
CPNE1-214ENST00000435747 KDM6AO15550 1401 aaPredicted RBP14.76□□□□□ -0.05
CPNE1-214ENST00000435747 MAP3K19Q56UN5 1328 aa14.76□□□□□ -0.05
CPNE1-214ENST00000435747 HSPA8P11142 646 aaKnown RBP14.76□□□□□ -0.05
CPNE1-214ENST00000435747 LMNB1P20700 586 aa14.76□□□□□ -0.05
CPNE1-214ENST00000435747 ATP6V1AP38606 617 aa14.76□□□□□ -0.05
CPNE1-214ENST00000435747 ITPK1Q13572 414 aa14.76□□□□□ -0.05
CPNE1-214ENST00000435747 NBPF6Q5VWK0 638 aa14.76□□□□□ -0.05
CPNE1-214ENST00000435747 HDGFL2Q7Z4V5 671 aaPredicted RBP14.76□□□□□ -0.05
CPNE1-214ENST00000435747 NBPF4Q96M43 638 aa14.76□□□□□ -0.05
CPNE1-214ENST00000435747 TNRC18O15417 2968 aaPredicted RBP14.76□□□□□ -0.05
CPNE1-214ENST00000435747 EDC4Q6P2E9 1401 aaKnown RBP14.75□□□□□ -0.05
CPNE1-214ENST00000435747 GYS1P13807 737 aa14.75□□□□□ -0.05
CPNE1-214ENST00000435747 VEGFBP49765 207 aa14.75□□□□□ -0.05
CPNE1-214ENST00000435747 NEUROD1Q13562 356 aa14.75□□□□□ -0.05
CPNE1-214ENST00000435747 CHADLQ6NUI6 762 aa14.75□□□□□ -0.05
CPNE1-214ENST00000435747 POTECB2RU33 542 aa14.74□□□□□ -0.05
CPNE1-214ENST00000435747 CYP27B1O15528 508 aa14.74□□□□□ -0.05
CPNE1-214ENST00000435747 CHRNA5P30532 468 aa14.74□□□□□ -0.05
CPNE1-214ENST00000435747 ROCK2O75116 1388 aaKnown RBP14.73□□□□□ -0.05
CPNE1-214ENST00000435747 ADRA2BP18089 450 aa14.73□□□□□ -0.05
CPNE1-214ENST00000435747 RFC4P35249 363 aa14.73□□□□□ -0.05
CPNE1-214ENST00000435747 TMC1Q8TDI8 760 aa14.73□□□□□ -0.05
CPNE1-214ENST00000435747 ARHGEF1Q92888 912 aaKnown RBP14.73□□□□□ -0.05
CPNE1-214ENST00000435747 TRIM26Q12899 539 aaPredicted RBP14.72□□□□□ -0.05
CPNE1-214ENST00000435747 DPY19L2Q6NUT2 758 aa14.72□□□□□ -0.05
CPNE1-214ENST00000435747 CFAP44Q96MT7 982 aa14.72□□□□□ -0.05
CPNE1-214ENST00000435747 SMG6Q86US8 1419 aaKnown RBP14.72□□□□□ -0.05
CPNE1-214ENST00000435747 TMOD3Q9NYL9 352 aa14.71□□□□□ -0.05
CPNE1-214ENST00000435747 ASAP1Q9ULH1 1129 aa14.71□□□□□ -0.05
CPNE1-214ENST00000435747 COG3Q96JB2 828 aa14.7□□□□□ -0.06
CPNE1-214ENST00000435747 RTL1A6NKG5 1358 aa14.7□□□□□ -0.06
CPNE1-214ENST00000435747 FBLN1P23142 703 aa14.69□□□□□ -0.06
CPNE1-214ENST00000435747 MAP2K1Q02750 393 aaPredicted RBP14.69□□□□□ -0.06
CPNE1-214ENST00000435747 PASKQ96RG2 1323 aa14.68□□□□□ -0.06
CPNE1-214ENST00000435747 TMEM88BA6NKF7 163 aa14.68□□□□□ -0.06
CPNE1-214ENST00000435747 TERF2IPQ9NYB0 399 aa14.68□□□□□ -0.06
CPNE1-214ENST00000435747 DICER1Q9UPY3 1922 aaKnown RBP14.67□□□□□ -0.06
CPNE1-214ENST00000435747 POTEIP0CG38 1075 aa14.67□□□□□ -0.06
CPNE1-214ENST00000435747 POTEJP0CG39 1038 aa14.67□□□□□ -0.06
CPNE1-214ENST00000435747 SLC12A5Q9H2X9 1139 aa14.67□□□□□ -0.06
CPNE1-214ENST00000435747 A0A1W2PP64 1363 aa14.67□□□□□ -0.06
CPNE1-214ENST00000435747 RPS6KA4O75676 772 aa14.66□□□□□ -0.06
CPNE1-214ENST00000435747 DDR1Q08345 913 aa14.66□□□□□ -0.06
CPNE1-214ENST00000435747 NKX1-1Q15270 411 aaPredicted RBP14.66□□□□□ -0.06
CPNE1-214ENST00000435747 RC3H1Q5TC82 1133 aaKnown RBP14.66□□□□□ -0.06
CPNE1-214ENST00000435747 CNTNAP4Q9C0A0 1308 aa14.66□□□□□ -0.06
CPNE1-214ENST00000435747 MYH14Q7Z406 1995 aaKnown RBP14.65□□□□□ -0.06
CPNE1-214ENST00000435747 TONSLQ96HA7 1378 aa14.65□□□□□ -0.06
CPNE1-214ENST00000435747 ATG3Q9NT62 314 aa14.65□□□□□ -0.06
CPNE1-214ENST00000435747 COL5A3P25940 1745 aaPredicted RBP14.65□□□□□ -0.06
CPNE1-214ENST00000435747 KDRP35968 1356 aa14.64□□□□□ -0.07
CPNE1-214ENST00000435747 FKBP8Q14318 412 aa14.64□□□□□ -0.07
CPNE1-214ENST00000435747 RRS1Q15050 365 aaKnown RBP14.64□□□□□ -0.07
CPNE1-214ENST00000435747 LDHDQ86WU2 507 aa14.64□□□□□ -0.07
CPNE1-214ENST00000435747 DLEC1Q9Y238 1755 aa14.63□□□□□ -0.07
CPNE1-214ENST00000435747 ZNF831Q5JPB2 1677 aa14.63□□□□□ -0.07
CPNE1-214ENST00000435747 NFKBIEO00221 500 aa14.63□□□□□ -0.07
CPNE1-214ENST00000435747 DEFB115Q30KQ5 88 aa14.63□□□□□ -0.07
CPNE1-214ENST00000435747 RBM42Q9BTD8 480 aaKnown RBP14.63□□□□□ -0.07
CPNE1-214ENST00000435747 BEGAINQ9BUH8 593 aa14.63□□□□□ -0.07
CPNE1-214ENST00000435747 SRP68Q9UHB9 627 aaKnown RBP14.63□□□□□ -0.07
CPNE1-214ENST00000435747 SPG7Q9UQ90 795 aa14.63□□□□□ -0.07
CPNE1-214ENST00000435747 WDR33Q9C0J8 1336 aaKnown RBP14.63□□□□□ -0.07
CPNE1-214ENST00000435747 RASSF10A6NK89 507 aa14.62□□□□□ -0.07
CPNE1-214ENST00000435747 ERFEQ4G0M1 354 aa14.62□□□□□ -0.07
CPNE1-214ENST00000435747 TTLL6Q8N841 843 aa14.62□□□□□ -0.07
CPNE1-214ENST00000435747 CARD11Q9BXL7 1154 aa14.62□□□□□ -0.07
CPNE1-214ENST00000435747 POLRMTO00411 1230 aaKnown RBP14.61□□□□□ -0.07
CPNE1-214ENST00000435747 SLC4A9Q96Q91 983 aa14.61□□□□□ -0.07
CPNE1-214ENST00000435747 USP42Q9H9J4 1324 aaKnown RBP14.61□□□□□ -0.07
CPNE1-214ENST00000435747 AFDNP55196 1824 aaKnown RBP14.6□□□□□ -0.07
CPNE1-214ENST00000435747 IQCA1LA6NCM1 817 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms