RNA–Protein interactions for RNA: ENST00000435437.2

RPE-207, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 858 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-207ENST00000435437 MRC1P22897 1456 aa12.01□□□□□ -0.49
RPE-207ENST00000435437 PPP2R1AP30153 589 aa12□□□□□ -0.49
RPE-207ENST00000435437 CCNL1Q9UK58 526 aaPredicted RBP12□□□□□ -0.49
RPE-207ENST00000435437 MTHFSDQ2M296 383 aaKnown RBP11.99□□□□□ -0.49
RPE-207ENST00000435437 ZNF530Q6P9A1 599 aaPredicted RBP11.99□□□□□ -0.49
RPE-207ENST00000435437 COL23A1Q86Y22 540 aaPredicted RBP11.99□□□□□ -0.49
RPE-207ENST00000435437 LINC00116Q8NCU8 138 aa11.99□□□□□ -0.49
RPE-207ENST00000435437 LGR6Q9HBX8 967 aa11.99□□□□□ -0.49
RPE-207ENST00000435437 SPON1Q9HCB6 807 aa11.99□□□□□ -0.49
RPE-207ENST00000435437 UBR2Q8IWV8 1755 aa11.98□□□□□ -0.49
RPE-207ENST00000435437 DIAPH1O60610 1272 aaKnown RBP11.98□□□□□ -0.49
RPE-207ENST00000435437 PLEKHO1Q53GL0 409 aaPredicted RBP11.98□□□□□ -0.49
RPE-207ENST00000435437 KCPQ6ZWJ8 1503 aa11.97□□□□□ -0.49
RPE-207ENST00000435437 LOC102724428A0A0B4J2F2 783 aa11.97□□□□□ -0.49
RPE-207ENST00000435437 SIK1P57059 783 aa11.97□□□□□ -0.49
RPE-207ENST00000435437 DCAF5Q96JK2 942 aa11.97□□□□□ -0.49
RPE-207ENST00000435437 MTFR1LQ9H019 292 aa11.97□□□□□ -0.49
RPE-207ENST00000435437 C4AP0C0L4 1744 aa11.97□□□□□ -0.49
RPE-207ENST00000435437 ERVV-2B6SEH9 535 aa11.96□□□□□ -0.49
RPE-207ENST00000435437 AMOTQ4VCS5 1084 aa11.96□□□□□ -0.49
RPE-207ENST00000435437 PHACTR3Q96KR7 559 aa11.96□□□□□ -0.49
RPE-207ENST00000435437 RSPH6AQ9H0K4 717 aa11.96□□□□□ -0.49
RPE-207ENST00000435437 TMOD3Q9NYL9 352 aa11.96□□□□□ -0.49
RPE-207ENST00000435437 RNMTO43148 476 aaKnown RBP11.95□□□□□ -0.5
RPE-207ENST00000435437 DLG5Q8TDM6 1919 aa11.95□□□□□ -0.5
RPE-207ENST00000435437 AKAP4Q5JQC9 854 aa11.94□□□□□ -0.5
RPE-207ENST00000435437 NFATC2IPQ8NCF5 419 aa11.94□□□□□ -0.5
RPE-207ENST00000435437 CNKSR2Q8WXI2 1034 aa11.94□□□□□ -0.5
RPE-207ENST00000435437 SMARCC1Q92922 1105 aaPredicted RBP11.94□□□□□ -0.5
RPE-207ENST00000435437 IL17REQ8NFR9 667 aa11.93□□□□□ -0.5
RPE-207ENST00000435437 TFCP2L1Q9NZI6 479 aa11.93□□□□□ -0.5
RPE-207ENST00000435437 KIAA1551Q9HCM1 1747 aa11.93□□□□□ -0.5
RPE-207ENST00000435437 FHDC1Q9C0D6 1143 aaPredicted RBP11.92□□□□□ -0.5
RPE-207ENST00000435437 CEMIPQ8WUJ3 1361 aa11.92□□□□□ -0.5
RPE-207ENST00000435437 U2SURPO15042 1029 aaKnown RBP11.91□□□□□ -0.5
RPE-207ENST00000435437 HSP90AB1P08238 724 aaKnown RBP11.91□□□□□ -0.5
RPE-207ENST00000435437 PRKAR2BP31323 418 aa11.91□□□□□ -0.5
RPE-207ENST00000435437 ATP6V1AP38606 617 aa11.91□□□□□ -0.5
RPE-207ENST00000435437 CABP4P57796 275 aa11.91□□□□□ -0.5
RPE-207ENST00000435437 DDX10Q13206 875 aaKnown RBP11.91□□□□□ -0.5
RPE-207ENST00000435437 SLC39A6Q13433 755 aa11.91□□□□□ -0.5
RPE-207ENST00000435437 MSL1Q68DK7 614 aa11.91□□□□□ -0.5
RPE-207ENST00000435437 SLC16A10Q8TF71 515 aa11.91□□□□□ -0.5
RPE-207ENST00000435437 SYT17Q9BSW7 474 aa11.91□□□□□ -0.5
RPE-207ENST00000435437 SLC52A2Q9HAB3 445 aa11.91□□□□□ -0.5
RPE-207ENST00000435437 MAP3K5Q99683 1374 aa11.91□□□□□ -0.5
RPE-207ENST00000435437 C1orf141Q5JVX7 400 aa11.9□□□□□ -0.5
RPE-207ENST00000435437 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.89□□□□□ -0.51
RPE-207ENST00000435437 ARXQ96QS3 562 aa11.89□□□□□ -0.51
RPE-207ENST00000435437 PLEKHF1Q96S99 279 aa11.89□□□□□ -0.51
RPE-207ENST00000435437 CNTNAP4Q9C0A0 1308 aa11.88□□□□□ -0.51
RPE-207ENST00000435437 KIF13BQ9NQT8 1826 aa11.88□□□□□ -0.51
RPE-207ENST00000435437 KCNQ3O43525 872 aa11.88□□□□□ -0.51
RPE-207ENST00000435437 PTCD1O75127 700 aaKnown RBP11.88□□□□□ -0.51
RPE-207ENST00000435437 INTS5Q6P9B9 1019 aaKnown RBP11.88□□□□□ -0.51
RPE-207ENST00000435437 NLGN2Q8NFZ4 835 aa11.88□□□□□ -0.51
RPE-207ENST00000435437 RBM42Q9BTD8 480 aaKnown RBP11.88□□□□□ -0.51
RPE-207ENST00000435437 PHF14O94880 888 aa11.87□□□□□ -0.51
RPE-207ENST00000435437 DNAJC10Q8IXB1 793 aa11.87□□□□□ -0.51
RPE-207ENST00000435437 GNPATO15228 680 aa11.86□□□□□ -0.51
RPE-207ENST00000435437 SSFA2P28290 1259 aa11.86□□□□□ -0.51
RPE-207ENST00000435437 CRKLP46109 303 aaKnown RBP11.86□□□□□ -0.51
RPE-207ENST00000435437 RC3H1Q5TC82 1133 aaKnown RBP11.86□□□□□ -0.51
RPE-207ENST00000435437 AK7Q96M32 723 aa11.86□□□□□ -0.51
RPE-207ENST00000435437 PPP1R1BQ9UD71 204 aaPredicted RBP11.86□□□□□ -0.51
RPE-207ENST00000435437 KDM3BQ7LBC6 1761 aa11.85□□□□□ -0.51
RPE-207ENST00000435437 RPS6KA4O75676 772 aa11.85□□□□□ -0.51
RPE-207ENST00000435437 FCHSD2O94868 740 aa11.85□□□□□ -0.51
RPE-207ENST00000435437 U2AF1L5P0DN76 240 aaPredicted RBP11.85□□□□□ -0.51
RPE-207ENST00000435437 CYP19A1P11511 503 aaPredicted RBP11.85□□□□□ -0.51
RPE-207ENST00000435437 U2AF1Q01081 240 aaKnown RBP eCLIP11.85□□□□□ -0.51
RPE-207ENST00000435437 DCTN1Q14203 1278 aa11.85□□□□□ -0.51
RPE-207ENST00000435437 ARHGEF1Q92888 912 aaKnown RBP11.85□□□□□ -0.51
RPE-207ENST00000435437 GNAT3A8MTJ3 354 aa11.84□□□□□ -0.51
RPE-207ENST00000435437 GAS2L2Q8NHY3 880 aa11.84□□□□□ -0.51
RPE-207ENST00000435437 CFAP53Q96M91 514 aa11.84□□□□□ -0.51
RPE-207ENST00000435437 BRCA1P38398 1863 aaKnown RBP11.83□□□□□ -0.52
RPE-207ENST00000435437 N4BP2Q86UW6 1770 aaPredicted RBP11.83□□□□□ -0.52
RPE-207ENST00000435437 PRAMEF22A3QJZ6 481 aa11.83□□□□□ -0.52
RPE-207ENST00000435437 GYS1P13807 737 aa11.83□□□□□ -0.52
RPE-207ENST00000435437 MCM10Q7L590 875 aa11.83□□□□□ -0.52
RPE-207ENST00000435437 ZNF496Q96IT1 587 aaPredicted RBP11.83□□□□□ -0.52
RPE-207ENST00000435437 BCL2L12Q9HB09 334 aa11.83□□□□□ -0.52
RPE-207ENST00000435437 SRP68Q9UHB9 627 aaKnown RBP11.83□□□□□ -0.52
RPE-207ENST00000435437 AFDNP55196 1824 aaKnown RBP11.83□□□□□ -0.52
RPE-207ENST00000435437 UTRNP46939 3433 aa11.83□□□□□ -0.52
RPE-207ENST00000435437 NRXN2Q9P2S2 1712 aa11.83□□□□□ -0.52
RPE-207ENST00000435437 FLAD1Q8NFF5 587 aa11.82□□□□□ -0.52
RPE-207ENST00000435437 ZBTB1Q9Y2K1 713 aa11.82□□□□□ -0.52
RPE-207ENST00000435437 SOS1Q07889 1333 aaPredicted RBP11.82□□□□□ -0.52
RPE-207ENST00000435437 HEG1Q9ULI3 1381 aa11.81□□□□□ -0.52
RPE-207ENST00000435437 YBX3P16989 372 aaKnown RBP eCLIP11.81□□□□□ -0.52
RPE-207ENST00000435437 RALBP1Q15311 655 aa11.81□□□□□ -0.52
RPE-207ENST00000435437 CCDC184Q52MB2 194 aa11.81□□□□□ -0.52
RPE-207ENST00000435437 ZNF790Q6PG37 636 aa11.81□□□□□ -0.52
RPE-207ENST00000435437 NUDCQ9Y266 331 aa11.81□□□□□ -0.52
RPE-207ENST00000435437 USP42Q9H9J4 1324 aaKnown RBP11.81□□□□□ -0.52
RPE-207ENST00000435437 SCN7AQ01118 1682 aa11.81□□□□□ -0.52
RPE-207ENST00000435437 CHD4Q14839 1912 aa11.8□□□□□ -0.52
RPE-207ENST00000435437 BCORQ6W2J9 1755 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms