RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 C21orf2O43822 256 aa7.34□□□□□ -1.23
HMGB3P10-201ENST00000434734 OCLNQ16625 522 aa7.34□□□□□ -1.23
HMGB3P10-201ENST00000434734 SLFNL1Q499Z3 407 aa7.34□□□□□ -1.23
HMGB3P10-201ENST00000434734 ZNF746Q6NUN9 644 aaPredicted RBP7.34□□□□□ -1.23
HMGB3P10-201ENST00000434734 ZNF594Q96JF6 807 aaPredicted RBP7.34□□□□□ -1.23
HMGB3P10-201ENST00000434734 BCL11AQ9H165 835 aa7.34□□□□□ -1.23
HMGB3P10-201ENST00000434734 NLRP2Q9NX02 1062 aa7.34□□□□□ -1.23
HMGB3P10-201ENST00000434734 CHPF2Q9P2E5 772 aa7.34□□□□□ -1.23
HMGB3P10-201ENST00000434734 PPEF1O14829 653 aaPredicted RBP7.33□□□□□ -1.24
HMGB3P10-201ENST00000434734 PER1O15534 1290 aaPredicted RBP7.33□□□□□ -1.24
HMGB3P10-201ENST00000434734 GFRA3O60609 400 aa7.33□□□□□ -1.24
HMGB3P10-201ENST00000434734 ANAPC15P60006 121 aa7.33□□□□□ -1.24
HMGB3P10-201ENST00000434734 KCNH2Q12809 1159 aa7.33□□□□□ -1.24
HMGB3P10-201ENST00000434734 MTMR2Q13614 643 aa7.33□□□□□ -1.24
HMGB3P10-201ENST00000434734 SPRYD7Q5W111 196 aa7.33□□□□□ -1.24
HMGB3P10-201ENST00000434734 RNF19BQ6ZMZ0 732 aa7.33□□□□□ -1.24
HMGB3P10-201ENST00000434734 ZNF598Q86UK7 904 aaKnown RBP7.33□□□□□ -1.24
HMGB3P10-201ENST00000434734 EMID1Q96A84 441 aaPredicted RBP7.33□□□□□ -1.24
HMGB3P10-201ENST00000434734 ARMC5Q96C12 935 aa7.33□□□□□ -1.24
HMGB3P10-201ENST00000434734 USB1Q9BQ65 265 aaKnown RBP7.33□□□□□ -1.24
HMGB3P10-201ENST00000434734 CXXC1Q9P0U4 656 aaPredicted RBP7.33□□□□□ -1.24
HMGB3P10-201ENST00000434734 SEPT3Q9UH03 358 aa7.33□□□□□ -1.24
HMGB3P10-201ENST00000434734 NOP58Q9Y2X3 529 aaKnown RBP7.33□□□□□ -1.24
HMGB3P10-201ENST00000434734 DNMT3AQ9Y6K1 912 aaPredicted RBP7.33□□□□□ -1.24
HMGB3P10-201ENST00000434734 CCDC194A0A1B0GVG4 234 aa7.32□□□□□ -1.24
HMGB3P10-201ENST00000434734 ATP5J2-PTCD1G3V325 749 aa7.32□□□□□ -1.24
HMGB3P10-201ENST00000434734 RPIAP49247 311 aa7.32□□□□□ -1.24
HMGB3P10-201ENST00000434734 MMP16P51512 607 aa7.32□□□□□ -1.24
HMGB3P10-201ENST00000434734 RBL2Q08999 1139 aa7.32□□□□□ -1.24
HMGB3P10-201ENST00000434734 BMS1Q14692 1282 aaKnown RBP7.32□□□□□ -1.24
HMGB3P10-201ENST00000434734 LIAT1Q6ZQX7 453 aa7.32□□□□□ -1.24
HMGB3P10-201ENST00000434734 PNMA1Q8ND90 353 aa7.32□□□□□ -1.24
HMGB3P10-201ENST00000434734 MORC4Q8TE76 937 aa7.32□□□□□ -1.24
HMGB3P10-201ENST00000434734 GTF3C2Q8WUA4 911 aaPredicted RBP7.32□□□□□ -1.24
HMGB3P10-201ENST00000434734 RNF34Q969K3 372 aa7.32□□□□□ -1.24
HMGB3P10-201ENST00000434734 GMLQ99445 158 aa7.32□□□□□ -1.24
HMGB3P10-201ENST00000434734 FAN1Q9Y2M0 1017 aa7.32□□□□□ -1.24
HMGB3P10-201ENST00000434734 MRPL42Q9Y6G3 142 aaKnown RBP7.32□□□□□ -1.24
HMGB3P10-201ENST00000434734 PRR20EP86478 221 aa7.31□□□□□ -1.24
HMGB3P10-201ENST00000434734 PRR20CP86479 221 aa7.31□□□□□ -1.24
HMGB3P10-201ENST00000434734 PRR20DP86480 221 aa7.31□□□□□ -1.24
HMGB3P10-201ENST00000434734 PRR20BP86481 221 aa7.31□□□□□ -1.24
HMGB3P10-201ENST00000434734 PRR20AP86496 221 aa7.31□□□□□ -1.24
HMGB3P10-201ENST00000434734 OSBPL2Q9H1P3 480 aa7.31□□□□□ -1.24
HMGB3P10-201ENST00000434734 GABBR1Q9UBS5 961 aa7.31□□□□□ -1.24
HMGB3P10-201ENST00000434734 PDZRN3Q9UPQ7 1066 aa7.31□□□□□ -1.24
HMGB3P10-201ENST00000434734 COL4A3BPQ9Y5P4 624 aa7.31□□□□□ -1.24
HMGB3P10-201ENST00000434734 LGR5O75473 907 aa7.3□□□□□ -1.24
HMGB3P10-201ENST00000434734 IBSPP21815 317 aaPredicted RBP7.3□□□□□ -1.24
HMGB3P10-201ENST00000434734 CLDN10P78369 228 aa7.3□□□□□ -1.24
HMGB3P10-201ENST00000434734 PLEKHG6Q3KR16 790 aa7.3□□□□□ -1.24
HMGB3P10-201ENST00000434734 Q6ZNB5 142 aa7.3□□□□□ -1.24
HMGB3P10-201ENST00000434734 CAPN12Q6ZSI9 719 aa7.3□□□□□ -1.24
HMGB3P10-201ENST00000434734 OGFOD1Q8N543 542 aa7.3□□□□□ -1.24
HMGB3P10-201ENST00000434734 FCF1Q9Y324 198 aaKnown RBP7.3□□□□□ -1.24
HMGB3P10-201ENST00000434734 DXOO77932 396 aaKnown RBP7.29□□□□□ -1.24
HMGB3P10-201ENST00000434734 MCCD1P59942 119 aaPredicted RBP7.29□□□□□ -1.24
HMGB3P10-201ENST00000434734 PLA2G2CQ5R387 149 aa7.29□□□□□ -1.24
HMGB3P10-201ENST00000434734 ZNF697Q5TEC3 545 aa7.29□□□□□ -1.24
HMGB3P10-201ENST00000434734 TMC7Q7Z402 723 aa7.29□□□□□ -1.24
HMGB3P10-201ENST00000434734 APBB1IPQ7Z5R6 666 aaPredicted RBP7.29□□□□□ -1.24
HMGB3P10-201ENST00000434734 RPUSD2Q8IZ73 545 aaKnown RBP7.29□□□□□ -1.24
HMGB3P10-201ENST00000434734 PMM1Q92871 262 aa7.29□□□□□ -1.24
HMGB3P10-201ENST00000434734 EVI5LQ96CN4 794 aa7.29□□□□□ -1.24
HMGB3P10-201ENST00000434734 BRINP2Q9C0B6 783 aa7.29□□□□□ -1.24
HMGB3P10-201ENST00000434734 PRDM9Q9NQV7 894 aa7.29□□□□□ -1.24
HMGB3P10-201ENST00000434734 PARP2Q9UGN5 583 aa7.29□□□□□ -1.24
HMGB3P10-201ENST00000434734 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.29□□□□□ -1.24
HMGB3P10-201ENST00000434734 DKK1O94907 266 aa7.28□□□□□ -1.24
HMGB3P10-201ENST00000434734 CD2BP2O95400 341 aaKnown RBP7.28□□□□□ -1.24
HMGB3P10-201ENST00000434734 RETREG3Q86VR2 466 aa7.28□□□□□ -1.24
HMGB3P10-201ENST00000434734 RNF135Q8IUD6 432 aa7.28□□□□□ -1.24
HMGB3P10-201ENST00000434734 TEX2Q8IWB9 1127 aa7.28□□□□□ -1.24
HMGB3P10-201ENST00000434734 DUSP9Q99956 384 aaKnown RBP7.28□□□□□ -1.24
HMGB3P10-201ENST00000434734 MKNK1Q9BUB5 465 aa7.28□□□□□ -1.24
HMGB3P10-201ENST00000434734 PCDH12Q9NPG4 1184 aa7.28□□□□□ -1.24
HMGB3P10-201ENST00000434734 METTL5Q9NRN9 209 aaKnown RBP7.28□□□□□ -1.24
HMGB3P10-201ENST00000434734 G3BP2Q9UN86 482 aaKnown RBP7.28□□□□□ -1.24
HMGB3P10-201ENST00000434734 KIAA1024Q9UPX6 916 aa7.28□□□□□ -1.24
HMGB3P10-201ENST00000434734 A0A0U1RQG5 324 aaPredicted RBP7.27□□□□□ -1.25
HMGB3P10-201ENST00000434734 ZBBXA8MT70 800 aa7.27□□□□□ -1.25
HMGB3P10-201ENST00000434734 HSD3B2P26439 372 aa7.27□□□□□ -1.25
HMGB3P10-201ENST00000434734 ZNF76P36508 570 aa7.27□□□□□ -1.25
HMGB3P10-201ENST00000434734 XPCQ01831 940 aaPredicted RBP7.27□□□□□ -1.25
HMGB3P10-201ENST00000434734 FKBP4Q02790 459 aaKnown RBP eCLIP7.27□□□□□ -1.25
HMGB3P10-201ENST00000434734 FMR1Q06787 632 aaKnown RBP eCLIP7.27□□□□□ -1.25
HMGB3P10-201ENST00000434734 HSP90AB2PQ58FF8 381 aa7.27□□□□□ -1.25
HMGB3P10-201ENST00000434734 TRIM67Q6ZTA4 783 aa7.27□□□□□ -1.25
HMGB3P10-201ENST00000434734 FILIP1Q7Z7B0 1213 aa7.27□□□□□ -1.25
HMGB3P10-201ENST00000434734 ZBTB24O43167 697 aaPredicted RBP7.26□□□□□ -1.25
HMGB3P10-201ENST00000434734 PLPP7Q8NBV4 271 aa7.26□□□□□ -1.25
HMGB3P10-201ENST00000434734 STAG1Q8WVM7 1258 aa7.26□□□□□ -1.25
HMGB3P10-201ENST00000434734 SYMPKQ92797 1274 aaKnown RBP7.26□□□□□ -1.25
HMGB3P10-201ENST00000434734 IRF2BPLQ9H1B7 796 aa7.26□□□□□ -1.25
HMGB3P10-201ENST00000434734 MRS2Q9HD23 443 aa7.26□□□□□ -1.25
HMGB3P10-201ENST00000434734 IFT57Q9NWB7 429 aa7.26□□□□□ -1.25
HMGB3P10-201ENST00000434734 MAGEC2Q9UBF1 373 aaPredicted RBP7.26□□□□□ -1.25
HMGB3P10-201ENST00000434734 VTI1BQ9UEU0 232 aa7.26□□□□□ -1.25
HMGB3P10-201ENST00000434734 C6orf229H3BNL8 230 aa7.25□□□□□ -1.25
HMGB3P10-201ENST00000434734 U2SURPO15042 1029 aaKnown RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms