RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 C14orf37Q86TY3 774 aa12.84□□□□□ -0.35
CD44-210ENST00000434472 IL27Q8NEV9 243 aa12.84□□□□□ -0.35
CD44-210ENST00000434472 ISY1Q9ULR0 285 aaKnown RBP12.84□□□□□ -0.35
CD44-210ENST00000434472 GOLGA6L3A6NEY3 463 aa12.83□□□□□ -0.36
CD44-210ENST00000434472 ERC2O15083 957 aa12.83□□□□□ -0.36
CD44-210ENST00000434472 LTV1Q96GA3 475 aaPredicted RBP12.83□□□□□ -0.36
CD44-210ENST00000434472 LRRCC1Q9C099 1032 aa12.83□□□□□ -0.36
CD44-210ENST00000434472 SRCIN1Q9C0H9 1055 aa12.83□□□□□ -0.36
CD44-210ENST00000434472 BRPF3Q9ULD4 1205 aa12.83□□□□□ -0.36
CD44-210ENST00000434472 N4BP2Q86UW6 1770 aaPredicted RBP12.83□□□□□ -0.36
CD44-210ENST00000434472 NFAT5O94916 1531 aa12.82□□□□□ -0.36
CD44-210ENST00000434472 PDE1AP54750 535 aa12.82□□□□□ -0.36
CD44-210ENST00000434472 PSME1Q06323 249 aa12.82□□□□□ -0.36
CD44-210ENST00000434472 OTUD7AQ8TE49 926 aaPredicted RBP12.82□□□□□ -0.36
CD44-210ENST00000434472 TNPO1Q92973 898 aaKnown RBP12.82□□□□□ -0.36
CD44-210ENST00000434472 CEMIPQ8WUJ3 1361 aa12.82□□□□□ -0.36
CD44-210ENST00000434472 PHRF1Q9P1Y6 1649 aaKnown RBP12.82□□□□□ -0.36
CD44-210ENST00000434472 APBB1O00213 710 aa12.81□□□□□ -0.36
CD44-210ENST00000434472 ST18O60284 1047 aa12.81□□□□□ -0.36
CD44-210ENST00000434472 HDGFL1Q5TGJ6 251 aa12.81□□□□□ -0.36
CD44-210ENST00000434472 AOX1Q06278 1338 aa12.81□□□□□ -0.36
CD44-210ENST00000434472 GOLGA6L22H0YM25 854 aa12.8□□□□□ -0.36
CD44-210ENST00000434472 LTN1O94822 1766 aa12.8□□□□□ -0.36
CD44-210ENST00000434472 PLEKHO1Q53GL0 409 aaPredicted RBP12.8□□□□□ -0.36
CD44-210ENST00000434472 CLEC17AQ6ZS10 378 aa12.8□□□□□ -0.36
CD44-210ENST00000434472 IBTKQ9P2D0 1353 aaPredicted RBP12.8□□□□□ -0.36
CD44-210ENST00000434472 MED1Q15648 1581 aaPredicted RBP12.8□□□□□ -0.36
CD44-210ENST00000434472 SALL3Q9BXA9 1300 aa12.8□□□□□ -0.36
CD44-210ENST00000434472 FSD2A1L4K1 749 aa12.8□□□□□ -0.36
CD44-210ENST00000434472 RAB11FIP3O75154 756 aa12.8□□□□□ -0.36
CD44-210ENST00000434472 UBTFL1P0CB47 393 aaPredicted RBP12.8□□□□□ -0.36
CD44-210ENST00000434472 NUCB2P80303 420 aa12.8□□□□□ -0.36
CD44-210ENST00000434472 AMOTQ4VCS5 1084 aa12.8□□□□□ -0.36
CD44-210ENST00000434472 AKAP4Q5JQC9 854 aa12.8□□□□□ -0.36
CD44-210ENST00000434472 RBM42Q9BTD8 480 aaKnown RBP12.8□□□□□ -0.36
CD44-210ENST00000434472 CWC22Q9HCG8 908 aaKnown RBP12.8□□□□□ -0.36
CD44-210ENST00000434472 STAP2Q9UGK3 403 aa12.8□□□□□ -0.36
CD44-210ENST00000434472 OVOS2A0A0G2JMS6 1433 aa12.79□□□□□ -0.36
CD44-210ENST00000434472 NCAPD2Q15021 1401 aa12.79□□□□□ -0.36
CD44-210ENST00000434472 CD2BP2O95400 341 aaKnown RBP12.79□□□□□ -0.36
CD44-210ENST00000434472 ESCO1Q5FWF5 840 aa12.79□□□□□ -0.36
CD44-210ENST00000434472 EPB41L2O43491 1005 aaKnown RBP12.78□□□□□ -0.36
CD44-210ENST00000434472 MX1P20591 662 aa12.78□□□□□ -0.36
CD44-210ENST00000434472 MCCP23508 829 aa12.78□□□□□ -0.36
CD44-210ENST00000434472 EIF4A1P60842 406 aaKnown RBP12.78□□□□□ -0.36
CD44-210ENST00000434472 EXOC6BQ9Y2D4 811 aa12.78□□□□□ -0.36
CD44-210ENST00000434472 TRHP20396 242 aaPredicted RBP12.77□□□□□ -0.36
CD44-210ENST00000434472 MRE11P49959 708 aa12.77□□□□□ -0.36
CD44-210ENST00000434472 TEFQ10587 303 aa12.77□□□□□ -0.36
CD44-210ENST00000434472 NBPF6Q5VWK0 638 aa12.77□□□□□ -0.36
CD44-210ENST00000434472 FAM43AQ8N2R8 423 aa12.77□□□□□ -0.36
CD44-210ENST00000434472 USHBP1Q8N6Y0 703 aa12.77□□□□□ -0.36
CD44-210ENST00000434472 SSH3Q8TE77 659 aa12.77□□□□□ -0.36
CD44-210ENST00000434472 NBPF4Q96M43 638 aa12.77□□□□□ -0.36
CD44-210ENST00000434472 USP44Q9H0E7 712 aa12.77□□□□□ -0.36
CD44-210ENST00000434472 LRRFIP2Q9Y608 721 aaKnown RBP12.77□□□□□ -0.36
CD44-210ENST00000434472 NPHP4O75161 1426 aaPredicted RBP12.77□□□□□ -0.37
CD44-210ENST00000434472 LMO7Q8WWI1 1683 aa12.77□□□□□ -0.37
CD44-210ENST00000434472 MCM2P49736 904 aa12.77□□□□□ -0.37
CD44-210ENST00000434472 NECTIN2Q92692 538 aa12.77□□□□□ -0.37
CD44-210ENST00000434472 HDAC5Q9UQL6 1122 aa12.77□□□□□ -0.37
CD44-210ENST00000434472 SLIT3O75094 1523 aa12.77□□□□□ -0.37
CD44-210ENST00000434472 KDM3BQ7LBC6 1761 aa12.76□□□□□ -0.37
CD44-210ENST00000434472 PNMA6EA0A0J9YXQ4 647 aa12.76□□□□□ -0.37
CD44-210ENST00000434472 ANAPC15P60006 121 aa12.76□□□□□ -0.37
CD44-210ENST00000434472 HSP90AB4PQ58FF6 505 aa12.76□□□□□ -0.37
CD44-210ENST00000434472 ZNF530Q6P9A1 599 aaPredicted RBP12.76□□□□□ -0.37
CD44-210ENST00000434472 ESYT1Q9BSJ8 1104 aa12.76□□□□□ -0.37
CD44-210ENST00000434472 LMTK3Q96Q04 1460 aa12.75□□□□□ -0.37
CD44-210ENST00000434472 POLA2Q14181 598 aa12.75□□□□□ -0.37
CD44-210ENST00000434472 C1orf141Q5JVX7 400 aa12.75□□□□□ -0.37
CD44-210ENST00000434472 GZF1Q9H116 711 aaPredicted RBP12.75□□□□□ -0.37
CD44-210ENST00000434472 FOXD4L1Q9NU39 408 aa12.75□□□□□ -0.37
CD44-210ENST00000434472 ARHGEF25Q86VW2 580 aa12.74□□□□□ -0.37
CD44-210ENST00000434472 DNAAF4Q8WXU2 420 aa12.74□□□□□ -0.37
CD44-210ENST00000434472 BTBD11A6QL63 1104 aa12.73□□□□□ -0.37
CD44-210ENST00000434472 RNMTO43148 476 aaKnown RBP12.73□□□□□ -0.37
CD44-210ENST00000434472 GCP02774 474 aa12.73□□□□□ -0.37
CD44-210ENST00000434472 EIF2S2P20042 333 aaKnown RBP12.73□□□□□ -0.37
CD44-210ENST00000434472 SSFA2P28290 1259 aa12.73□□□□□ -0.37
CD44-210ENST00000434472 PHAXQ9H814 394 aaKnown RBP12.73□□□□□ -0.37
CD44-210ENST00000434472 LGR6Q9HBX8 967 aa12.73□□□□□ -0.37
CD44-210ENST00000434472 ADAMTSL3P82987 1691 aa12.73□□□□□ -0.37
CD44-210ENST00000434472 SETD1BQ9UPS6 1966 aaKnown RBP12.73□□□□□ -0.37
CD44-210ENST00000434472 ZBTB7CA1YPR0 619 aa12.73□□□□□ -0.37
CD44-210ENST00000434472 TRIM6-TRIM34B2RNG4 842 aa12.73□□□□□ -0.37
CD44-210ENST00000434472 XRCC6P12956 609 aaKnown RBP eCLIP12.73□□□□□ -0.37
CD44-210ENST00000434472 CHMLP26374 656 aa12.73□□□□□ -0.37
CD44-210ENST00000434472 BEND3Q5T5X7 828 aa12.73□□□□□ -0.37
CD44-210ENST00000434472 KIF1BPQ96EK5 621 aa12.73□□□□□ -0.37
CD44-210ENST00000434472 IL17RAQ96F46 866 aa12.73□□□□□ -0.37
CD44-210ENST00000434472 DBF4Q9UBU7 674 aaPredicted RBP12.73□□□□□ -0.37
CD44-210ENST00000434472 MST1RQ04912 1400 aa12.72□□□□□ -0.37
CD44-210ENST00000434472 ALDH1L1O75891 902 aa12.72□□□□□ -0.37
CD44-210ENST00000434472 BAG4O95429 457 aaKnown RBP12.72□□□□□ -0.37
CD44-210ENST00000434472 PPP1R42Q7Z4L9 355 aa12.72□□□□□ -0.37
CD44-210ENST00000434472 RILPL2Q969X0 211 aa12.72□□□□□ -0.37
CD44-210ENST00000434472 TUBGCP6Q96RT7 1819 aa12.72□□□□□ -0.37
CD44-210ENST00000434472 KIF1AQ12756 1690 aa12.72□□□□□ -0.37
CD44-210ENST00000434472 CAMTA1Q9Y6Y1 1673 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms