RNA–Protein interactions for RNA: ENST00000434152.5

APOE-203, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 864 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-203ENST00000434152 HSP90AB1P08238 724 aaKnown RBP27.19■■□□□ 1.94
APOE-203ENST00000434152 MSL1Q68DK7 614 aa27.19■■□□□ 1.94
APOE-203ENST00000434152 ZNF530Q6P9A1 599 aaPredicted RBP27.19■■□□□ 1.94
APOE-203ENST00000434152 AMIGO3Q86WK7 504 aa27.19■■□□□ 1.94
APOE-203ENST00000434152 DCAF5Q96JK2 942 aa27.19■■□□□ 1.94
APOE-203ENST00000434152 AK7Q96M32 723 aa27.19■■□□□ 1.94
APOE-203ENST00000434152 SMIM5Q71RC9 77 aa27.18■■□□□ 1.94
APOE-203ENST00000434152 LINC00116Q8NCU8 138 aa27.18■■□□□ 1.94
APOE-203ENST00000434152 MYBBP1AQ9BQG0 1328 aaKnown RBP27.17■■□□□ 1.94
APOE-203ENST00000434152 ATP6V1AP38606 617 aa27.17■■□□□ 1.94
APOE-203ENST00000434152 ITPK1Q13572 414 aa27.17■■□□□ 1.94
APOE-203ENST00000434152 PRKRIP1Q9H875 184 aaPredicted RBP27.16■■□□□ 1.94
APOE-203ENST00000434152 C5P01031 1676 aa27.16■■□□□ 1.94
APOE-203ENST00000434152 U2SURPO15042 1029 aaKnown RBP27.15■■□□□ 1.94
APOE-203ENST00000434152 COL24A1Q17RW2 1714 aa27.15■■□□□ 1.94
APOE-203ENST00000434152 HMOX1P09601 288 aa27.14■■□□□ 1.94
APOE-203ENST00000434152 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.13■■□□□ 1.93
APOE-203ENST00000434152 PHF14O94880 888 aa27.13■■□□□ 1.93
APOE-203ENST00000434152 NLGN2Q8NFZ4 835 aa27.13■■□□□ 1.93
APOE-203ENST00000434152 TAF1LQ8IZX4 1826 aa27.12■■□□□ 1.93
APOE-203ENST00000434152 CABP4P57796 275 aa27.12■■□□□ 1.93
APOE-203ENST00000434152 C1orf141Q5JVX7 400 aa27.12■■□□□ 1.93
APOE-203ENST00000434152 C4BP0C0L5 1744 aa27.12■■□□□ 1.93
APOE-203ENST00000434152 KDM6AO15550 1401 aaPredicted RBP27.11■■□□□ 1.93
APOE-203ENST00000434152 GPR162Q16538 588 aa27.11■■□□□ 1.93
APOE-203ENST00000434152 SLC4A9Q96Q91 983 aa27.11■■□□□ 1.93
APOE-203ENST00000434152 FCHSD2O94868 740 aa27.1■■□□□ 1.93
APOE-203ENST00000434152 SSFA2P28290 1259 aa27.1■■□□□ 1.93
APOE-203ENST00000434152 RBM42Q9BTD8 480 aaKnown RBP27.1■■□□□ 1.93
APOE-203ENST00000434152 GNPATO15228 680 aa27.08■■□□□ 1.93
APOE-203ENST00000434152 NFATC2IPQ8NCF5 419 aa27.08■■□□□ 1.93
APOE-203ENST00000434152 RSPH6AQ9H0K4 717 aa27.08■■□□□ 1.93
APOE-203ENST00000434152 U2AF1L5P0DN76 240 aaPredicted RBP27.07■■□□□ 1.92
APOE-203ENST00000434152 U2AF1Q01081 240 aaKnown RBP eCLIP27.07■■□□□ 1.92
APOE-203ENST00000434152 AKAP4Q5JQC9 854 aa27.07■■□□□ 1.92
APOE-203ENST00000434152 SCN11AQ9UI33 1791 aa27.06■■□□□ 1.92
APOE-203ENST00000434152 PELP1Q8IZL8 1130 aaKnown RBP27.05■■□□□ 1.92
APOE-203ENST00000434152 ADAMTS7Q9UKP4 1686 aa27.05■■□□□ 1.92
APOE-203ENST00000434152 MTHFSDQ2M296 383 aaKnown RBP27.04■■□□□ 1.92
APOE-203ENST00000434152 GAS2L2Q8NHY3 880 aa27.03■■□□□ 1.92
APOE-203ENST00000434152 CD2APQ9Y5K6 639 aa27.03■■□□□ 1.92
APOE-203ENST00000434152 UTRNP46939 3433 aa27.03■■□□□ 1.92
APOE-203ENST00000434152 VIRMAQ69YN4 1812 aaKnown RBP27.02■■□□□ 1.92
APOE-203ENST00000434152 PRKAR2BP31323 418 aa27.02■■□□□ 1.92
APOE-203ENST00000434152 PTCD1O75127 700 aaKnown RBP27.01■■□□□ 1.91
APOE-203ENST00000434152 RC3H1Q5TC82 1133 aaKnown RBP27.01■■□□□ 1.91
APOE-203ENST00000434152 PNNQ9H307 717 aaKnown RBP27.01■■□□□ 1.91
APOE-203ENST00000434152 LGR6Q9HBX8 967 aa27.01■■□□□ 1.91
APOE-203ENST00000434152 RTCBQ9Y3I0 505 aaKnown RBP27.01■■□□□ 1.91
APOE-203ENST00000434152 UBR3Q6ZT12 1888 aa27.01■■□□□ 1.91
APOE-203ENST00000434152 TRAPPC3LQ5T215 181 aa27■■□□□ 1.91
APOE-203ENST00000434152 ZNF784Q8NCA9 323 aaPredicted RBP26.99■■□□□ 1.91
APOE-203ENST00000434152 YBX3P16989 372 aaKnown RBP eCLIP26.98■■□□□ 1.91
APOE-203ENST00000434152 CNTNAP4Q9C0A0 1308 aa26.97■■□□□ 1.91
APOE-203ENST00000434152 RNMTO43148 476 aaKnown RBP26.97■■□□□ 1.91
APOE-203ENST00000434152 RPS6KA4O75676 772 aa26.97■■□□□ 1.91
APOE-203ENST00000434152 ARHGEF1Q92888 912 aaKnown RBP26.97■■□□□ 1.91
APOE-203ENST00000434152 PHACTR3Q96KR7 559 aa26.97■■□□□ 1.91
APOE-203ENST00000434152 SLC52A2Q9HAB3 445 aa26.97■■□□□ 1.91
APOE-203ENST00000434152 MRC1P22897 1456 aa26.96■■□□□ 1.91
APOE-203ENST00000434152 ANP32CO43423 234 aa26.96■■□□□ 1.91
APOE-203ENST00000434152 GNAT3A8MTJ3 354 aa26.94■■□□□ 1.9
APOE-203ENST00000434152 NEFMP07197 916 aa26.94■■□□□ 1.9
APOE-203ENST00000434152 ADRA2BP18089 450 aa26.94■■□□□ 1.9
APOE-203ENST00000434152 PLEKHF1Q96S99 279 aa26.94■■□□□ 1.9
APOE-203ENST00000434152 ZNF831Q5JPB2 1677 aa26.93■■□□□ 1.9
APOE-203ENST00000434152 GRIN3BO60391 1043 aa26.93■■□□□ 1.9
APOE-203ENST00000434152 MMP10P09238 476 aa26.92■■□□□ 1.9
APOE-203ENST00000434152 NLGN1Q8N2Q7 840 aa26.92■■□□□ 1.9
APOE-203ENST00000434152 RFC4P35249 363 aa26.91■■□□□ 1.9
APOE-203ENST00000434152 CRKLP46109 303 aaKnown RBP26.91■■□□□ 1.9
APOE-203ENST00000434152 HTATSF1O43719 755 aaKnown RBP26.9■■□□□ 1.9
APOE-203ENST00000434152 SLC39A6Q13433 755 aa26.9■■□□□ 1.9
APOE-203ENST00000434152 CEMIPQ8WUJ3 1361 aa26.88■■□□□ 1.89
APOE-203ENST00000434152 GYS1P13807 737 aa26.88■■□□□ 1.89
APOE-203ENST00000434152 WDR43Q15061 677 aaKnown RBP eCLIP26.88■■□□□ 1.89
APOE-203ENST00000434152 DNAJC10Q8IXB1 793 aa26.88■■□□□ 1.89
APOE-203ENST00000434152 SIPA1L3O60292 1781 aaPredicted RBP26.88■■□□□ 1.89
APOE-203ENST00000434152 CHD4Q14839 1912 aa26.87■■□□□ 1.89
APOE-203ENST00000434152 INTS5Q6P9B9 1019 aaKnown RBP26.87■■□□□ 1.89
APOE-203ENST00000434152 DLG5Q8TDM6 1919 aa26.86■■□□□ 1.89
APOE-203ENST00000434152 IL17REQ8NFR9 667 aa26.86■■□□□ 1.89
APOE-203ENST00000434152 MAPK8IP3Q9UPT6 1336 aa26.86■■□□□ 1.89
APOE-203ENST00000434152 GOLGB1Q14789 3259 aaKnown RBP26.85■■□□□ 1.89
APOE-203ENST00000434152 WWC3Q9ULE0 1092 aa26.85■■□□□ 1.89
APOE-203ENST00000434152 COL5A3P25940 1745 aaPredicted RBP26.85■■□□□ 1.89
APOE-203ENST00000434152 CICQ96RK0 1608 aaPredicted RBP26.84■■□□□ 1.89
APOE-203ENST00000434152 MYH14Q7Z406 1995 aaKnown RBP26.84■■□□□ 1.89
APOE-203ENST00000434152 SRP68Q9UHB9 627 aaKnown RBP26.83■■□□□ 1.89
APOE-203ENST00000434152 CYP19A1P11511 503 aaPredicted RBP26.82■■□□□ 1.88
APOE-203ENST00000434152 NFE2L2Q16236 605 aa26.82■■□□□ 1.88
APOE-203ENST00000434152 RTF1Q92541 710 aaKnown RBP26.82■■□□□ 1.88
APOE-203ENST00000434152 ADAMTS8Q9UP79 889 aa26.82■■□□□ 1.88
APOE-203ENST00000434152 TEFQ10587 303 aa26.81■■□□□ 1.88
APOE-203ENST00000434152 CCDC87Q9NVE4 849 aa26.81■■□□□ 1.88
APOE-203ENST00000434152 RUNDC1Q96C34 613 aa26.8■■□□□ 1.88
APOE-203ENST00000434152 PARP3Q9Y6F1 533 aa26.8■■□□□ 1.88
APOE-203ENST00000434152 UBR2Q8IWV8 1755 aa26.79■■□□□ 1.88
APOE-203ENST00000434152 FKBP8Q14318 412 aa26.79■■□□□ 1.88
APOE-203ENST00000434152 USP42Q9H9J4 1324 aaKnown RBP26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms