RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 BMP2KQ9NSY1 1161 aaPredicted RBP13.34□□□□□ -0.27
SEC16A-206ENST00000431893 GSTTP1A0A1W2PQM5 241 aa13.34□□□□□ -0.27
SEC16A-206ENST00000431893 SFPQP23246 707 aaKnown RBP eCLIP13.34□□□□□ -0.27
SEC16A-206ENST00000431893 TXNDC2Q86VQ3 553 aa13.34□□□□□ -0.27
SEC16A-206ENST00000431893 SLC12A5Q9H2X9 1139 aa13.34□□□□□ -0.27
SEC16A-206ENST00000431893 LRP2BPQ9P2M1 347 aa13.33□□□□□ -0.27
SEC16A-206ENST00000431893 PDE3AQ14432 1141 aa13.33□□□□□ -0.28
SEC16A-206ENST00000431893 CDKL5O76039 1030 aa13.33□□□□□ -0.28
SEC16A-206ENST00000431893 TOP1P11387 765 aaKnown RBP13.33□□□□□ -0.28
SEC16A-206ENST00000431893 CACNA2D4Q7Z3S7 1137 aa13.33□□□□□ -0.28
SEC16A-206ENST00000431893 CCDC144CPQ8IYA2 1237 aa13.33□□□□□ -0.28
SEC16A-206ENST00000431893 MINDY4BA8MYZ0 360 aa13.33□□□□□ -0.28
SEC16A-206ENST00000431893 PPP6R1Q9UPN7 881 aa13.33□□□□□ -0.28
SEC16A-206ENST00000431893 TERF1P54274 439 aa13.32□□□□□ -0.28
SEC16A-206ENST00000431893 SMG6Q86US8 1419 aaKnown RBP13.32□□□□□ -0.28
SEC16A-206ENST00000431893 RAB11FIP4Q86YS3 637 aa13.32□□□□□ -0.28
SEC16A-206ENST00000431893 ZNF830Q96NB3 372 aaPredicted RBP13.32□□□□□ -0.28
SEC16A-206ENST00000431893 ABCF2Q9UG63 623 aa13.32□□□□□ -0.28
SEC16A-206ENST00000431893 PDS5BQ9NTI5 1447 aa13.32□□□□□ -0.28
SEC16A-206ENST00000431893 SPTY2D1Q68D10 685 aaPredicted RBP13.32□□□□□ -0.28
SEC16A-206ENST00000431893 BTBD11A6QL63 1104 aa13.32□□□□□ -0.28
SEC16A-206ENST00000431893 THUMPD2Q9BTF0 503 aaKnown RBP13.32□□□□□ -0.28
SEC16A-206ENST00000431893 TMC6Q7Z403 805 aa13.32□□□□□ -0.28
SEC16A-206ENST00000431893 LMAN1P49257 510 aa13.31□□□□□ -0.28
SEC16A-206ENST00000431893 RNF216Q9NWF9 866 aaPredicted RBP13.31□□□□□ -0.28
SEC16A-206ENST00000431893 CCT2P78371 535 aaKnown RBP13.31□□□□□ -0.28
SEC16A-206ENST00000431893 CCDC183Q5T5S1 534 aa13.31□□□□□ -0.28
SEC16A-206ENST00000431893 ZNF530Q6P9A1 599 aaPredicted RBP13.31□□□□□ -0.28
SEC16A-206ENST00000431893 KIF18AQ8NI77 898 aa13.31□□□□□ -0.28
SEC16A-206ENST00000431893 TATP17735 454 aaPredicted RBP13.31□□□□□ -0.28
SEC16A-206ENST00000431893 ZSCAN31Q96LW9 406 aaPredicted RBP13.31□□□□□ -0.28
SEC16A-206ENST00000431893 BOLA2Q9H3K6 86 aa13.31□□□□□ -0.28
SEC16A-206ENST00000431893 TMCO5BA8MYB1 307 aa13.31□□□□□ -0.28
SEC16A-206ENST00000431893 TDRD12Q587J7 1177 aaKnown RBP13.31□□□□□ -0.28
SEC16A-206ENST00000431893 IMMTQ16891 758 aaKnown RBP13.3□□□□□ -0.28
SEC16A-206ENST00000431893 C20orf194Q5TEA3 1177 aa13.3□□□□□ -0.28
SEC16A-206ENST00000431893 AIDAQ96BJ3 306 aa13.3□□□□□ -0.28
SEC16A-206ENST00000431893 CDK19Q9BWU1 502 aa13.3□□□□□ -0.28
SEC16A-206ENST00000431893 PRPF4BQ13523 1007 aaKnown RBP13.3□□□□□ -0.28
SEC16A-206ENST00000431893 HLTFQ14527 1009 aaKnown RBP eCLIP13.3□□□□□ -0.289e-7■■■□□ 15.3
SEC16A-206ENST00000431893 PANK2Q9BZ23 570 aa13.3□□□□□ -0.28
SEC16A-206ENST00000431893 CABP1Q9NZU7 370 aa13.3□□□□□ -0.28
SEC16A-206ENST00000431893 ZSCAN12O43309 604 aa13.3□□□□□ -0.28
SEC16A-206ENST00000431893 ZSCAN25Q6NSZ9 544 aa13.3□□□□□ -0.28
SEC16A-206ENST00000431893 CTR9Q6PD62 1173 aa13.3□□□□□ -0.28
SEC16A-206ENST00000431893 TOM1L2Q6ZVM7 507 aa13.3□□□□□ -0.28
SEC16A-206ENST00000431893 MAATS1Q7Z4T9 603 aa13.3□□□□□ -0.28
SEC16A-206ENST00000431893 FKBP15Q5T1M5 1219 aa13.29□□□□□ -0.28
SEC16A-206ENST00000431893 MMRN2Q9H8L6 949 aa13.29□□□□□ -0.28
SEC16A-206ENST00000431893 SCLT1Q96NL6 688 aa13.29□□□□□ -0.28
SEC16A-206ENST00000431893 CCDC96Q2M329 555 aa13.29□□□□□ -0.28
SEC16A-206ENST00000431893 TFIP11Q9UBB9 837 aaKnown RBP13.28□□□□□ -0.28
SEC16A-206ENST00000431893 CEP131Q9UPN4 1083 aa13.28□□□□□ -0.28
SEC16A-206ENST00000431893 GPRASP1Q5JY77 1395 aa13.28□□□□□ -0.28
SEC16A-206ENST00000431893 LARP1Q6PKG0 1096 aaKnown RBP13.28□□□□□ -0.28
SEC16A-206ENST00000431893 ADCY5O95622 1261 aa13.28□□□□□ -0.28
SEC16A-206ENST00000431893 MAP9Q49MG5 647 aa13.28□□□□□ -0.28
SEC16A-206ENST00000431893 TNPO1Q92973 898 aaKnown RBP13.28□□□□□ -0.28
SEC16A-206ENST00000431893 GBP3Q9H0R5 595 aa13.28□□□□□ -0.28
SEC16A-206ENST00000431893 HSP90AA4PQ58FG1 418 aa13.28□□□□□ -0.28
SEC16A-206ENST00000431893 ZNF526Q8TF50 670 aaPredicted RBP13.28□□□□□ -0.28
SEC16A-206ENST00000431893 ANO10Q9NW15 660 aa13.28□□□□□ -0.28
SEC16A-206ENST00000431893 DESP17661 470 aa13.28□□□□□ -0.28
SEC16A-206ENST00000431893 MYCNP04198 464 aaPredicted RBP13.27□□□□□ -0.28
SEC16A-206ENST00000431893 SPECC1Q5M775 1068 aa13.27□□□□□ -0.28
SEC16A-206ENST00000431893 PTPRGP23470 1445 aa13.27□□□□□ -0.28
SEC16A-206ENST00000431893 TSG101Q99816 390 aa13.27□□□□□ -0.28
SEC16A-206ENST00000431893 MCM10Q7L590 875 aa13.27□□□□□ -0.29
SEC16A-206ENST00000431893 CCDC8Q9H0W5 538 aaPredicted RBP13.27□□□□□ -0.29
SEC16A-206ENST00000431893 SEC63Q9UGP8 760 aaKnown RBP13.27□□□□□ -0.29
SEC16A-206ENST00000431893 SMC1AQ14683 1233 aaKnown RBP13.26□□□□□ -0.29
SEC16A-206ENST00000431893 WASF1Q92558 559 aa13.26□□□□□ -0.29
SEC16A-206ENST00000431893 SMARCC1Q92922 1105 aaPredicted RBP13.26□□□□□ -0.29
SEC16A-206ENST00000431893 CTNNA3Q9UI47 895 aa13.26□□□□□ -0.29
SEC16A-206ENST00000431893 TSHZ3Q63HK5 1081 aa13.26□□□□□ -0.29
SEC16A-206ENST00000431893 DRC1Q96MC2 740 aa13.26□□□□□ -0.29
SEC16A-206ENST00000431893 METTL24Q5JXM2 366 aa13.26□□□□□ -0.29
SEC16A-206ENST00000431893 CNNM3Q8NE01 707 aa13.26□□□□□ -0.29
SEC16A-206ENST00000431893 GCOM1H8Y6P7 765 aaPredicted RBP13.26□□□□□ -0.29
SEC16A-206ENST00000431893 MYZAPP0CAP1 466 aa13.26□□□□□ -0.29
SEC16A-206ENST00000431893 POTEJP0CG39 1038 aa13.26□□□□□ -0.29
SEC16A-206ENST00000431893 FSIP1Q8NA03 581 aa13.26□□□□□ -0.29
SEC16A-206ENST00000431893 STAMBPO95630 424 aa13.25□□□□□ -0.29
SEC16A-206ENST00000431893 CEP126Q9P2H0 1117 aa13.25□□□□□ -0.29
SEC16A-206ENST00000431893 POLR3DP05423 398 aaPredicted RBP13.25□□□□□ -0.29
SEC16A-206ENST00000431893 MX1P20591 662 aa13.25□□□□□ -0.29
SEC16A-206ENST00000431893 C8orf76Q96K31 380 aa13.25□□□□□ -0.29
SEC16A-206ENST00000431893 FGD6Q6ZV73 1430 aa13.25□□□□□ -0.29
SEC16A-206ENST00000431893 PAIP2Q9BPZ3 127 aaKnown RBP13.25□□□□□ -0.29
SEC16A-206ENST00000431893 CALCOCO1Q9P1Z2 691 aa13.25□□□□□ -0.29
SEC16A-206ENST00000431893 RANBP6O60518 1105 aaKnown RBP13.25□□□□□ -0.29
SEC16A-206ENST00000431893 CTNNA2P26232 953 aa13.25□□□□□ -0.29
SEC16A-206ENST00000431893 CCDC175P0C221 793 aa13.24□□□□□ -0.29
SEC16A-206ENST00000431893 CIZ1Q9ULV3 898 aaPredicted RBP13.24□□□□□ -0.29
SEC16A-206ENST00000431893 SPG7Q9UQ90 795 aa13.24□□□□□ -0.29
SEC16A-206ENST00000431893 CEP135Q66GS9 1140 aa13.24□□□□□ -0.29
SEC16A-206ENST00000431893 F6X3S4 739 aa13.24□□□□□ -0.29
SEC16A-206ENST00000431893 PPP1R12BO60237 982 aaPredicted RBP13.24□□□□□ -0.29
SEC16A-206ENST00000431893 GJB2P29033 226 aa13.24□□□□□ -0.29
SEC16A-206ENST00000431893 SNW1Q13573 536 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms