RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 NFATC2IPQ8NCF5 419 aa13.13□□□□□ -0.31
HDAC6-207ENST00000430858 FLAD1Q8NFF5 587 aa13.13□□□□□ -0.31
HDAC6-207ENST00000430858 RSPH6AQ9H0K4 717 aa13.13□□□□□ -0.31
HDAC6-207ENST00000430858 FCHSD2O94868 740 aa13.12□□□□□ -0.31
HDAC6-207ENST00000430858 PRKAR2BP31323 418 aa13.12□□□□□ -0.31
HDAC6-207ENST00000430858 AK7Q96M32 723 aa13.12□□□□□ -0.31
HDAC6-207ENST00000430858 SLC52A2Q9HAB3 445 aa13.12□□□□□ -0.31
HDAC6-207ENST00000430858 LGR6Q9HBX8 967 aa13.12□□□□□ -0.31
HDAC6-207ENST00000430858 ITPK1Q13572 414 aa13.11□□□□□ -0.31
HDAC6-207ENST00000430858 COL23A1Q86Y22 540 aaPredicted RBP13.11□□□□□ -0.31
HDAC6-207ENST00000430858 LINC00116Q8NCU8 138 aa13.11□□□□□ -0.31
HDAC6-207ENST00000430858 SGIP1Q9BQI5 828 aa13.11□□□□□ -0.31
HDAC6-207ENST00000430858 RBM42Q9BTD8 480 aaKnown RBP13.11□□□□□ -0.31
HDAC6-207ENST00000430858 C5P01031 1676 aa13.11□□□□□ -0.31
HDAC6-207ENST00000430858 QSER1Q2KHR3 1735 aa13.1□□□□□ -0.31
HDAC6-207ENST00000430858 MAP3K5Q99683 1374 aa13.1□□□□□ -0.31
HDAC6-207ENST00000430858 GNAT3A8MTJ3 354 aa13.1□□□□□ -0.31
HDAC6-207ENST00000430858 MSH5O43196 834 aa13.1□□□□□ -0.31
HDAC6-207ENST00000430858 MRC1P22897 1456 aa13.1□□□□□ -0.31
HDAC6-207ENST00000430858 SSFA2P28290 1259 aa13.09□□□□□ -0.31
HDAC6-207ENST00000430858 POLD1P28340 1107 aa13.09□□□□□ -0.31
HDAC6-207ENST00000430858 PHACTR3Q96KR7 559 aa13.09□□□□□ -0.31
HDAC6-207ENST00000430858 SLC4A9Q96Q91 983 aa13.09□□□□□ -0.31
HDAC6-207ENST00000430858 C4BP0C0L5 1744 aa13.08□□□□□ -0.32
HDAC6-207ENST00000430858 SCN11AQ9UI33 1791 aa13.08□□□□□ -0.32
HDAC6-207ENST00000430858 PTCD1O75127 700 aaKnown RBP13.08□□□□□ -0.32
HDAC6-207ENST00000430858 ARXQ96QS3 562 aa13.08□□□□□ -0.32
HDAC6-207ENST00000430858 MYBBP1AQ9BQG0 1328 aaKnown RBP13.08□□□□□ -0.32
HDAC6-207ENST00000430858 TAF1LQ8IZX4 1826 aa13.07□□□□□ -0.32
HDAC6-207ENST00000430858 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.07□□□□□ -0.32
HDAC6-207ENST00000430858 GNPATO15228 680 aa13.07□□□□□ -0.32
HDAC6-207ENST00000430858 PHF14O94880 888 aa13.07□□□□□ -0.32
HDAC6-207ENST00000430858 NEFMP07197 916 aa13.07□□□□□ -0.32
HDAC6-207ENST00000430858 TEFQ10587 303 aa13.07□□□□□ -0.32
HDAC6-207ENST00000430858 RC3H1Q5TC82 1133 aaKnown RBP13.07□□□□□ -0.32
HDAC6-207ENST00000430858 IL17REQ8NFR9 667 aa13.07□□□□□ -0.32
HDAC6-207ENST00000430858 ADAMTS7Q9UKP4 1686 aa13.07□□□□□ -0.32
HDAC6-207ENST00000430858 CNTNAP4Q9C0A0 1308 aa13.07□□□□□ -0.32
HDAC6-207ENST00000430858 ZNF831Q5JPB2 1677 aa13.06□□□□□ -0.32
HDAC6-207ENST00000430858 AMIGO3Q86WK7 504 aa13.06□□□□□ -0.32
HDAC6-207ENST00000430858 PNNQ9H307 717 aaKnown RBP13.06□□□□□ -0.32
HDAC6-207ENST00000430858 RTCBQ9Y3I0 505 aaKnown RBP13.06□□□□□ -0.32
HDAC6-207ENST00000430858 TUBGCP6Q96RT7 1819 aa13.06□□□□□ -0.32
HDAC6-207ENST00000430858 SLC39A6Q13433 755 aa13.05□□□□□ -0.32
HDAC6-207ENST00000430858 RTF1Q92541 710 aaKnown RBP13.05□□□□□ -0.32
HDAC6-207ENST00000430858 FHDC1Q9C0D6 1143 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-207ENST00000430858 CEMIPQ8WUJ3 1361 aa13.05□□□□□ -0.32
HDAC6-207ENST00000430858 HTATSF1O43719 755 aaKnown RBP13.04□□□□□ -0.32
HDAC6-207ENST00000430858 RPS6KA4O75676 772 aa13.04□□□□□ -0.32
HDAC6-207ENST00000430858 ADRA2BP18089 450 aa13.04□□□□□ -0.32
HDAC6-207ENST00000430858 TTC5Q8N0Z6 440 aa13.04□□□□□ -0.32
HDAC6-207ENST00000430858 PLEKHF1Q96S99 279 aa13.04□□□□□ -0.32
HDAC6-207ENST00000430858 SYT17Q9BSW7 474 aa13.04□□□□□ -0.32
HDAC6-207ENST00000430858 CRKLP46109 303 aaKnown RBP13.03□□□□□ -0.32
HDAC6-207ENST00000430858 TRAPPC3LQ5T215 181 aa13.03□□□□□ -0.32
HDAC6-207ENST00000430858 MSL1Q68DK7 614 aa13.03□□□□□ -0.32
HDAC6-207ENST00000430858 SMIM5Q71RC9 77 aa13.03□□□□□ -0.32
HDAC6-207ENST00000430858 VSIG10Q8N0Z9 540 aa13.03□□□□□ -0.32
HDAC6-207ENST00000430858 PRKRIP1Q9H875 184 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-207ENST00000430858 UBR3Q6ZT12 1888 aa13.02□□□□□ -0.32
HDAC6-207ENST00000430858 DCAF8L1A6NGE4 600 aa13.02□□□□□ -0.33
HDAC6-207ENST00000430858 ZNF790Q6PG37 636 aa13.02□□□□□ -0.33
HDAC6-207ENST00000430858 COL24A1Q17RW2 1714 aa13.02□□□□□ -0.33
HDAC6-207ENST00000430858 ZNF316A6NFI3 1004 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-207ENST00000430858 MCM10Q7L590 875 aa13.01□□□□□ -0.33
HDAC6-207ENST00000430858 DNAJC10Q8IXB1 793 aa13.01□□□□□ -0.33
HDAC6-207ENST00000430858 ARHGEF1Q92888 912 aaKnown RBP13.01□□□□□ -0.33
HDAC6-207ENST00000430858 MAPK8IP3Q9UPT6 1336 aa13.01□□□□□ -0.33
HDAC6-207ENST00000430858 KCPQ6ZWJ8 1503 aa13.01□□□□□ -0.33
HDAC6-207ENST00000430858 COL5A3P25940 1745 aaPredicted RBP13□□□□□ -0.33
HDAC6-207ENST00000430858 CICQ96RK0 1608 aaPredicted RBP13□□□□□ -0.33
HDAC6-207ENST00000430858 BTBD11A6QL63 1104 aa13□□□□□ -0.33
HDAC6-207ENST00000430858 CYP19A1P11511 503 aaPredicted RBP13□□□□□ -0.33
HDAC6-207ENST00000430858 RFC4P35249 363 aa13□□□□□ -0.33
HDAC6-207ENST00000430858 INTS5Q6P9B9 1019 aaKnown RBP13□□□□□ -0.33
HDAC6-207ENST00000430858 CCDC87Q9NVE4 849 aa13□□□□□ -0.33
HDAC6-207ENST00000430858 HEG1Q9ULI3 1381 aa12.99□□□□□ -0.33
HDAC6-207ENST00000430858 STARD3NLO95772 234 aa12.99□□□□□ -0.33
HDAC6-207ENST00000430858 DCTN1Q14203 1278 aa12.99□□□□□ -0.33
HDAC6-207ENST00000430858 NFE2L2Q16236 605 aa12.99□□□□□ -0.33
HDAC6-207ENST00000430858 KLHL34Q8N239 644 aa12.99□□□□□ -0.33
HDAC6-207ENST00000430858 NLGN1Q8N2Q7 840 aa12.99□□□□□ -0.33
HDAC6-207ENST00000430858 ZNF496Q96IT1 587 aaPredicted RBP12.99□□□□□ -0.33
HDAC6-207ENST00000430858 FMNL2Q96PY5 1086 aa12.99□□□□□ -0.33
HDAC6-207ENST00000430858 TEX13AQ9BXU3 409 aaPredicted RBP12.99□□□□□ -0.33
HDAC6-207ENST00000430858 WDR43Q15061 677 aaKnown RBP eCLIP12.98□□□□□ -0.33
HDAC6-207ENST00000430858 TJP1Q07157 1748 aa12.98□□□□□ -0.33
HDAC6-207ENST00000430858 VIRMAQ69YN4 1812 aaKnown RBP12.97□□□□□ -0.33
HDAC6-207ENST00000430858 GYS1P13807 737 aa12.97□□□□□ -0.33
HDAC6-207ENST00000430858 TAF7Q15545 349 aaPredicted RBP12.97□□□□□ -0.33
HDAC6-207ENST00000430858 CD2APQ9Y5K6 639 aa12.97□□□□□ -0.33
HDAC6-207ENST00000430858 SOS1Q07889 1333 aaPredicted RBP12.96□□□□□ -0.33
HDAC6-207ENST00000430858 KCNQ3O43525 872 aa12.96□□□□□ -0.33
HDAC6-207ENST00000430858 PNISRQ8TF01 805 aaKnown RBP12.96□□□□□ -0.33
HDAC6-207ENST00000430858 ZBTB1Q9Y2K1 713 aa12.96□□□□□ -0.33
HDAC6-207ENST00000430858 SIPA1L3O60292 1781 aaPredicted RBP12.96□□□□□ -0.34
HDAC6-207ENST00000430858 UBR2Q8IWV8 1755 aa12.96□□□□□ -0.34
HDAC6-207ENST00000430858 MYH14Q7Z406 1995 aaKnown RBP12.96□□□□□ -0.34
HDAC6-207ENST00000430858 USP42Q9H9J4 1324 aaKnown RBP12.95□□□□□ -0.34
HDAC6-207ENST00000430858 MMP10P09238 476 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms