RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 CHD4Q14839 1912 aa20.95■□□□□ 0.94
CTDSP1-202ENST00000428361 NPC1L1Q9UHC9 1359 aa20.95■□□□□ 0.94
CTDSP1-202ENST00000428361 UBR3Q6ZT12 1888 aa20.94■□□□□ 0.94
CTDSP1-202ENST00000428361 PHF14O94880 888 aa20.94■□□□□ 0.94
CTDSP1-202ENST00000428361 MSL1Q68DK7 614 aa20.94■□□□□ 0.94
CTDSP1-202ENST00000428361 LINC00116Q8NCU8 138 aa20.94■□□□□ 0.94
CTDSP1-202ENST00000428361 CD2APQ9Y5K6 639 aa20.94■□□□□ 0.94
CTDSP1-202ENST00000428361 ZNF831Q5JPB2 1677 aa20.93■□□□□ 0.94
CTDSP1-202ENST00000428361 GNPATO15228 680 aa20.93■□□□□ 0.94
CTDSP1-202ENST00000428361 PER1O15534 1290 aaPredicted RBP20.93■□□□□ 0.94
CTDSP1-202ENST00000428361 AEBP1Q8IUX7 1158 aa20.93■□□□□ 0.94
CTDSP1-202ENST00000428361 GRIN3BO60391 1043 aa20.92■□□□□ 0.94
CTDSP1-202ENST00000428361 PELP1Q8IZL8 1130 aaKnown RBP20.92■□□□□ 0.94
CTDSP1-202ENST00000428361 RBM42Q9BTD8 480 aaKnown RBP20.92■□□□□ 0.94
CTDSP1-202ENST00000428361 KDM6AO15550 1401 aaPredicted RBP20.92■□□□□ 0.94
CTDSP1-202ENST00000428361 ADRA2BP18089 450 aa20.91■□□□□ 0.94
CTDSP1-202ENST00000428361 ITPK1Q13572 414 aa20.91■□□□□ 0.94
CTDSP1-202ENST00000428361 AKAP4Q5JQC9 854 aa20.91■□□□□ 0.94
CTDSP1-202ENST00000428361 CC2D1BQ5T0F9 858 aaKnown RBP20.91■□□□□ 0.94
CTDSP1-202ENST00000428361 RTCBQ9Y3I0 505 aaKnown RBP20.91■□□□□ 0.94
CTDSP1-202ENST00000428361 DIAPH1O60610 1272 aaKnown RBP20.9■□□□□ 0.94
CTDSP1-202ENST00000428361 RC3H1Q5TC82 1133 aaKnown RBP20.9■□□□□ 0.94
CTDSP1-202ENST00000428361 NLGN2Q8NFZ4 835 aa20.89■□□□□ 0.93
CTDSP1-202ENST00000428361 CNTNAP4Q9C0A0 1308 aa20.88■□□□□ 0.93
CTDSP1-202ENST00000428361 TRAPPC3LQ5T215 181 aa20.88■□□□□ 0.93
CTDSP1-202ENST00000428361 UTRNP46939 3433 aa20.87■□□□□ 0.93
CTDSP1-202ENST00000428361 ZNF784Q8NCA9 323 aaPredicted RBP20.86■□□□□ 0.93
CTDSP1-202ENST00000428361 NLGN1Q8N2Q7 840 aa20.85■□□□□ 0.93
CTDSP1-202ENST00000428361 NFATC2IPQ8NCF5 419 aa20.85■□□□□ 0.93
CTDSP1-202ENST00000428361 HMOX1P09601 288 aa20.84■□□□□ 0.93
CTDSP1-202ENST00000428361 AMIGO3Q86WK7 504 aa20.84■□□□□ 0.93
CTDSP1-202ENST00000428361 SCN11AQ9UI33 1791 aa20.84■□□□□ 0.93
CTDSP1-202ENST00000428361 RPS6KA4O75676 772 aa20.83■□□□□ 0.93
CTDSP1-202ENST00000428361 RFC4P35249 363 aa20.83■□□□□ 0.93
CTDSP1-202ENST00000428361 SLC52A2Q9HAB3 445 aa20.83■□□□□ 0.93
CTDSP1-202ENST00000428361 COL5A3P25940 1745 aaPredicted RBP20.83■□□□□ 0.92
CTDSP1-202ENST00000428361 PTCD1O75127 700 aaKnown RBP20.82■□□□□ 0.92
CTDSP1-202ENST00000428361 CFAP53Q96M91 514 aa20.82■□□□□ 0.92
CTDSP1-202ENST00000428361 SLC4A9Q96Q91 983 aa20.82■□□□□ 0.92
CTDSP1-202ENST00000428361 CICQ96RK0 1608 aaPredicted RBP20.8■□□□□ 0.92
CTDSP1-202ENST00000428361 MRC1P22897 1456 aa20.8■□□□□ 0.92
CTDSP1-202ENST00000428361 U2SURPO15042 1029 aaKnown RBP20.79■□□□□ 0.92
CTDSP1-202ENST00000428361 RNMTO43148 476 aaKnown RBP20.79■□□□□ 0.92
CTDSP1-202ENST00000428361 MMP10P09238 476 aa20.79■□□□□ 0.92
CTDSP1-202ENST00000428361 SMIM5Q71RC9 77 aa20.79■□□□□ 0.92
CTDSP1-202ENST00000428361 GAS2L2Q8NHY3 880 aa20.79■□□□□ 0.92
CTDSP1-202ENST00000428361 ARHGEF1Q92888 912 aaKnown RBP20.79■□□□□ 0.92
CTDSP1-202ENST00000428361 YBX3P16989 372 aaKnown RBP eCLIP20.78■□□□□ 0.921e-6■□□□□ 10.2
CTDSP1-202ENST00000428361 CRKLP46109 303 aaKnown RBP20.77■□□□□ 0.92
CTDSP1-202ENST00000428361 MTHFSDQ2M296 383 aaKnown RBP20.77■□□□□ 0.92
CTDSP1-202ENST00000428361 CCDC87Q9NVE4 849 aa20.77■□□□□ 0.92
CTDSP1-202ENST00000428361 NUDCQ9Y266 331 aa20.77■□□□□ 0.92
CTDSP1-202ENST00000428361 COL3A1P02461 1466 aaPredicted RBP20.76■□□□□ 0.91
CTDSP1-202ENST00000428361 CNGB1Q14028 1251 aaPredicted RBP20.76■□□□□ 0.91
CTDSP1-202ENST00000428361 PARP3Q9Y6F1 533 aa20.76■□□□□ 0.91
CTDSP1-202ENST00000428361 GOLGB1Q14789 3259 aaKnown RBP20.76■□□□□ 0.91
CTDSP1-202ENST00000428361 GYS1P13807 737 aa20.75■□□□□ 0.91
CTDSP1-202ENST00000428361 TGFB2P61812 414 aa20.75■□□□□ 0.91
CTDSP1-202ENST00000428361 LGR6Q9HBX8 967 aa20.75■□□□□ 0.91
CTDSP1-202ENST00000428361 TTC5Q8N0Z6 440 aa20.74■□□□□ 0.91
CTDSP1-202ENST00000428361 VSIG10Q8N0Z9 540 aa20.74■□□□□ 0.91
CTDSP1-202ENST00000428361 ADAMTS7Q9UKP4 1686 aa20.73■□□□□ 0.91
CTDSP1-202ENST00000428361 GNAT3A8MTJ3 354 aa20.73■□□□□ 0.91
CTDSP1-202ENST00000428361 TEFQ10587 303 aa20.73■□□□□ 0.91
CTDSP1-202ENST00000428361 MYH14Q7Z406 1995 aaKnown RBP20.73■□□□□ 0.91
CTDSP1-202ENST00000428361 TJP1Q07157 1748 aa20.73■□□□□ 0.91
CTDSP1-202ENST00000428361 USP42Q9H9J4 1324 aaKnown RBP20.72■□□□□ 0.91
CTDSP1-202ENST00000428361 C4AP0C0L4 1744 aa20.71■□□□□ 0.91
CTDSP1-202ENST00000428361 ZPR1O75312 459 aa20.71■□□□□ 0.91
CTDSP1-202ENST00000428361 VIRMAQ69YN4 1812 aaKnown RBP20.71■□□□□ 0.91
CTDSP1-202ENST00000428361 C10orf71Q711Q0 1435 aa20.7■□□□□ 0.9
CTDSP1-202ENST00000428361 KIF13BQ9NQT8 1826 aa20.7■□□□□ 0.9
CTDSP1-202ENST00000428361 DNAJC10Q8IXB1 793 aa20.7■□□□□ 0.9
CTDSP1-202ENST00000428361 GIGYF1O75420 1035 aaPredicted RBP20.69■□□□□ 0.9
CTDSP1-202ENST00000428361 STARD3NLO95772 234 aa20.69■□□□□ 0.9
CTDSP1-202ENST00000428361 SLC39A6Q13433 755 aa20.69■□□□□ 0.9
CTDSP1-202ENST00000428361 INTS5Q6P9B9 1019 aaKnown RBP20.69■□□□□ 0.9
CTDSP1-202ENST00000428361 TEX13AQ9BXU3 409 aaPredicted RBP20.69■□□□□ 0.9
CTDSP1-202ENST00000428361 CYP19A1P11511 503 aaPredicted RBP20.68■□□□□ 0.9
CTDSP1-202ENST00000428361 SOS1Q07889 1333 aaPredicted RBP20.68■□□□□ 0.9
CTDSP1-202ENST00000428361 PXDNLA1KZ92 1463 aa20.68■□□□□ 0.9
CTDSP1-202ENST00000428361 KCPQ6ZWJ8 1503 aa20.68■□□□□ 0.9
CTDSP1-202ENST00000428361 PPP2R1AP30153 589 aa20.66■□□□□ 0.9
CTDSP1-202ENST00000428361 PRKAR2BP31323 418 aa20.66■□□□□ 0.9
CTDSP1-202ENST00000428361 COL15A1P39059 1388 aa20.65■□□□□ 0.9
CTDSP1-202ENST00000428361 NEFMP07197 916 aa20.65■□□□□ 0.9
CTDSP1-202ENST00000428361 U2AF1L5P0DN76 240 aaPredicted RBP20.65■□□□□ 0.9
CTDSP1-202ENST00000428361 C1QTNF8P60827 252 aa20.65■□□□□ 0.9
CTDSP1-202ENST00000428361 U2AF1Q01081 240 aaKnown RBP eCLIP20.65■□□□□ 0.9
CTDSP1-202ENST00000428361 RSPH6AQ9H0K4 717 aa20.65■□□□□ 0.9
CTDSP1-202ENST00000428361 SRP68Q9UHB9 627 aaKnown RBP20.65■□□□□ 0.9
CTDSP1-202ENST00000428361 UBR2Q8IWV8 1755 aa20.64■□□□□ 0.9
CTDSP1-202ENST00000428361 A0A087WZG4 1122 aa20.64■□□□□ 0.89
CTDSP1-202ENST00000428361 FCHSD2O94868 740 aa20.64■□□□□ 0.89
CTDSP1-202ENST00000428361 FKBP8Q14318 412 aa20.64■□□□□ 0.89
CTDSP1-202ENST00000428361 ZNF790Q6PG37 636 aa20.64■□□□□ 0.89
CTDSP1-202ENST00000428361 NPM2Q86SE8 214 aaKnown RBP20.64■□□□□ 0.89
CTDSP1-202ENST00000428361 RTF1Q92541 710 aaKnown RBP20.64■□□□□ 0.89
CTDSP1-202ENST00000428361 NARFQ9UHQ1 456 aa20.64■□□□□ 0.89
CTDSP1-202ENST00000428361 BCS1LQ9Y276 419 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms