RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 CCDC183Q5T5S1 534 aa6.21□□□□□ -1.42
RIF1-203ENST00000428287 RBM43Q6ZSC3 357 aaKnown RBP6.21□□□□□ -1.42
RIF1-203ENST00000428287 C14orf93Q9H972 538 aaKnown RBP6.21□□□□□ -1.42
RIF1-203ENST00000428287 PRDM10Q9NQV6 1147 aa6.21□□□□□ -1.42
RIF1-203ENST00000428287 C3P01024 1663 aa6.21□□□□□ -1.42
RIF1-203ENST00000428287 ATAD5Q96QE3 1844 aa6.21□□□□□ -1.42
RIF1-203ENST00000428287 ADCY5O95622 1261 aa6.21□□□□□ -1.42
RIF1-203ENST00000428287 ITPRIPQ8IWB1 547 aa6.21□□□□□ -1.42
RIF1-203ENST00000428287 RBM27Q9P2N5 1060 aaKnown RBP6.21□□□□□ -1.42
RIF1-203ENST00000428287 PAXBP1Q9Y5B6 917 aa6.21□□□□□ -1.42
RIF1-203ENST00000428287 CCDC66A2RUB6 948 aa6.2□□□□□ -1.42
RIF1-203ENST00000428287 KCNJ6P48051 423 aa6.2□□□□□ -1.42
RIF1-203ENST00000428287 CCDC171Q6TFL3 1326 aa6.2□□□□□ -1.42
RIF1-203ENST00000428287 U2AF1L5P0DN76 240 aaPredicted RBP6.2□□□□□ -1.42
RIF1-203ENST00000428287 HCLS1P14317 486 aaPredicted RBP6.2□□□□□ -1.42
RIF1-203ENST00000428287 U2AF2P26368 475 aaKnown RBP eCLIP6.2□□□□□ -1.427e-7■■■■□ 21.1
RIF1-203ENST00000428287 CBX1P83916 185 aa6.2□□□□□ -1.42
RIF1-203ENST00000428287 U2AF1Q01081 240 aaKnown RBP eCLIP6.2□□□□□ -1.422e-6■■■■□ 20.3
RIF1-203ENST00000428287 RPAP2Q8IXW5 612 aaPredicted RBP6.2□□□□□ -1.42
RIF1-203ENST00000428287 TSPY26PQ9H489 355 aa6.2□□□□□ -1.42
RIF1-203ENST00000428287 ADGRF5Q8IZF2 1346 aa6.2□□□□□ -1.42
RIF1-203ENST00000428287 CITO14578 2027 aa6.2□□□□□ -1.42
RIF1-203ENST00000428287 MYO10Q9HD67 2058 aa6.2□□□□□ -1.42
RIF1-203ENST00000428287 SMTNL1A8MU46 457 aa6.2□□□□□ -1.42
RIF1-203ENST00000428287 L2HGDHQ9H9P8 463 aa6.2□□□□□ -1.42
RIF1-203ENST00000428287 WDR33Q9C0J8 1336 aaKnown RBP6.2□□□□□ -1.42
RIF1-203ENST00000428287 CAPN2P17655 700 aa6.2□□□□□ -1.42
RIF1-203ENST00000428287 KCNF1Q9H3M0 494 aa6.2□□□□□ -1.42
RIF1-203ENST00000428287 ELP1O95163 1332 aa6.2□□□□□ -1.42
RIF1-203ENST00000428287 ERC2O15083 957 aa6.19□□□□□ -1.42
RIF1-203ENST00000428287 H2AFXP16104 143 aaPredicted RBP6.19□□□□□ -1.42
RIF1-203ENST00000428287 RNF214Q8ND24 703 aa6.19□□□□□ -1.42
RIF1-203ENST00000428287 CALCOCO1Q9P1Z2 691 aa6.19□□□□□ -1.42
RIF1-203ENST00000428287 FER1L4A9Z1Z3 1794 aa6.19□□□□□ -1.42
RIF1-203ENST00000428287 NEUROD2Q15784 382 aa6.19□□□□□ -1.42
RIF1-203ENST00000428287 KIF18AQ8NI77 898 aa6.19□□□□□ -1.42
RIF1-203ENST00000428287 TIGD1Q96MW7 591 aa6.19□□□□□ -1.42
RIF1-203ENST00000428287 UBXN6Q9BZV1 441 aa6.19□□□□□ -1.42
RIF1-203ENST00000428287 NUP214P35658 2090 aaPredicted RBP6.19□□□□□ -1.42
RIF1-203ENST00000428287 MUM1L1Q5H9M0 696 aa6.19□□□□□ -1.42
RIF1-203ENST00000428287 STAP2Q9UGK3 403 aa6.19□□□□□ -1.42
RIF1-203ENST00000428287 TMEM131LA2VDJ0 1609 aa6.19□□□□□ -1.42
RIF1-203ENST00000428287 KRT222Q8N1A0 295 aa6.18□□□□□ -1.42
RIF1-203ENST00000428287 AP5Z1O43299 807 aa6.18□□□□□ -1.42
RIF1-203ENST00000428287 HAP1P54257 671 aaPredicted RBP6.18□□□□□ -1.42
RIF1-203ENST00000428287 EFCAB2Q5VUJ9 269 aa6.18□□□□□ -1.42
RIF1-203ENST00000428287 NYAP1Q6ZVC0 841 aa6.18□□□□□ -1.42
RIF1-203ENST00000428287 IRX5P78411 483 aaPredicted RBP6.18□□□□□ -1.42
RIF1-203ENST00000428287 CHAF1AQ13111 956 aaPredicted RBP6.18□□□□□ -1.42
RIF1-203ENST00000428287 DNAJC2Q99543 621 aaKnown RBP6.18□□□□□ -1.42
RIF1-203ENST00000428287 ECM29Q5VYK3 1845 aa6.18□□□□□ -1.42
RIF1-203ENST00000428287 TSPYL1Q9H0U9 437 aa6.18□□□□□ -1.42
RIF1-203ENST00000428287 NRKQ7Z2Y5 1582 aa6.18□□□□□ -1.42
RIF1-203ENST00000428287 SRCAPQ6ZRS2 3230 aa6.18□□□□□ -1.42
RIF1-203ENST00000428287 ZRANB2O95218 330 aaKnown RBP eCLIP6.18□□□□□ -1.425e-9■■■■■ 100.6
RIF1-203ENST00000428287 MRPL50Q8N5N7 158 aaKnown RBP6.18□□□□□ -1.42
RIF1-203ENST00000428287 RGS22Q8NE09 1264 aa6.18□□□□□ -1.42
RIF1-203ENST00000428287 PTPRMP28827 1452 aa6.18□□□□□ -1.42
RIF1-203ENST00000428287 SIPA1L3O60292 1781 aaPredicted RBP6.18□□□□□ -1.42
RIF1-203ENST00000428287 FYB1O15117 783 aa6.17□□□□□ -1.42
RIF1-203ENST00000428287 NEK4P51957 841 aa6.17□□□□□ -1.42
RIF1-203ENST00000428287 DNTTIP2Q5QJE6 756 aaKnown RBP6.17□□□□□ -1.42
RIF1-203ENST00000428287 JARID2Q92833 1246 aaPredicted RBP6.17□□□□□ -1.42
RIF1-203ENST00000428287 CHAMP1Q96JM3 812 aa6.17□□□□□ -1.42
RIF1-203ENST00000428287 API5Q9BZZ5 524 aaKnown RBP6.17□□□□□ -1.42
RIF1-203ENST00000428287 FAM200AQ8TCP9 573 aa6.17□□□□□ -1.42
RIF1-203ENST00000428287 NPHP3Q7Z494 1330 aa6.17□□□□□ -1.42
RIF1-203ENST00000428287 MMP14P50281 582 aa6.17□□□□□ -1.42
RIF1-203ENST00000428287 MSL3Q8N5Y2 521 aaKnown RBP6.17□□□□□ -1.42
RIF1-203ENST00000428287 TTC14Q96N46 770 aa6.17□□□□□ -1.42
RIF1-203ENST00000428287 RPGRIP1LQ68CZ1 1315 aa6.17□□□□□ -1.42
RIF1-203ENST00000428287 YY1AP1Q9H869 796 aa6.17□□□□□ -1.42
RIF1-203ENST00000428287 AFDNP55196 1824 aaKnown RBP6.17□□□□□ -1.42
RIF1-203ENST00000428287 IFT57Q9NWB7 429 aa6.17□□□□□ -1.42
RIF1-203ENST00000428287 CGNQ9P2M7 1197 aaKnown RBP6.17□□□□□ -1.42
RIF1-203ENST00000428287 ATP6V1DQ9Y5K8 247 aa6.17□□□□□ -1.42
RIF1-203ENST00000428287 A0A1W2PP64 1363 aa6.17□□□□□ -1.42
RIF1-203ENST00000428287 ERCC6L2Q5T890 1561 aa6.17□□□□□ -1.42
RIF1-203ENST00000428287 ZNF830Q96NB3 372 aaPredicted RBP6.16□□□□□ -1.42
RIF1-203ENST00000428287 NPATQ14207 1427 aa6.16□□□□□ -1.42
RIF1-203ENST00000428287 YTHDC2Q9H6S0 1430 aaKnown RBP6.16□□□□□ -1.42
RIF1-203ENST00000428287 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.16□□□□□ -1.42
RIF1-203ENST00000428287 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.16□□□□□ -1.42
RIF1-203ENST00000428287 PDE1AP54750 535 aa6.16□□□□□ -1.42
RIF1-203ENST00000428287 EVC2Q86UK5 1308 aa6.16□□□□□ -1.42
RIF1-203ENST00000428287 LRRC37A3O60309 1634 aa6.16□□□□□ -1.42
RIF1-203ENST00000428287 ADGRL3Q9HAR2 1447 aa6.16□□□□□ -1.42
RIF1-203ENST00000428287 CYP2C19P33261 490 aa6.16□□□□□ -1.42
RIF1-203ENST00000428287 USP48Q86UV5 1035 aa6.16□□□□□ -1.42
RIF1-203ENST00000428287 SPAG9O60271 1321 aaKnown RBP6.16□□□□□ -1.42
RIF1-203ENST00000428287 PDE4DIPQ5VU43 2346 aa6.16□□□□□ -1.42
RIF1-203ENST00000428287 KMT5BQ4FZB7 885 aa6.16□□□□□ -1.42
RIF1-203ENST00000428287 SARM1Q6SZW1 724 aa6.16□□□□□ -1.42
RIF1-203ENST00000428287 PYCARDQ9ULZ3 195 aa6.16□□□□□ -1.42
RIF1-203ENST00000428287 ERBB3P21860 1342 aa6.16□□□□□ -1.42
RIF1-203ENST00000428287 ZNFX1Q9P2E3 1918 aaKnown RBP6.16□□□□□ -1.42
RIF1-203ENST00000428287 GOLGB1Q14789 3259 aaKnown RBP6.16□□□□□ -1.42
RIF1-203ENST00000428287 CEP85Q6P2H3 762 aa6.15□□□□□ -1.42
RIF1-203ENST00000428287 TM6SF1Q9BZW5 370 aa6.15□□□□□ -1.42
RIF1-203ENST00000428287 CTR9Q6PD62 1173 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms