RNA–Protein interactions for RNA: ENST00000428274.5

PHF1-205, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-205ENST00000428274 C4BP0C0L5 1744 aa17.67■□□□□ 0.42
PHF1-205ENST00000428274 YY1P25490 414 aa17.67■□□□□ 0.42
PHF1-205ENST00000428274 AKAP4Q5JQC9 854 aa17.67■□□□□ 0.42
PHF1-205ENST00000428274 ZNF831Q5JPB2 1677 aa17.66■□□□□ 0.42
PHF1-205ENST00000428274 UBR3Q6ZT12 1888 aa17.66■□□□□ 0.42
PHF1-205ENST00000428274 U2SURPO15042 1029 aaKnown RBP17.65■□□□□ 0.42
PHF1-205ENST00000428274 CABP4P57796 275 aa17.65■□□□□ 0.42
PHF1-205ENST00000428274 ITPK1Q13572 414 aa17.65■□□□□ 0.42
PHF1-205ENST00000428274 MTHFSDQ2M296 383 aaKnown RBP17.65■□□□□ 0.42
PHF1-205ENST00000428274 MSL1Q68DK7 614 aa17.65■□□□□ 0.42
PHF1-205ENST00000428274 NFATC2IPQ8NCF5 419 aa17.65■□□□□ 0.42
PHF1-205ENST00000428274 CFAP53Q96M91 514 aa17.65■□□□□ 0.42
PHF1-205ENST00000428274 ADAMTS7Q9UKP4 1686 aa17.64■□□□□ 0.42
PHF1-205ENST00000428274 LINC00116Q8NCU8 138 aa17.64■□□□□ 0.41
PHF1-205ENST00000428274 SLC4A9Q96Q91 983 aa17.64■□□□□ 0.41
PHF1-205ENST00000428274 MSH5O43196 834 aa17.63■□□□□ 0.41
PHF1-205ENST00000428274 ATP6V1AP38606 617 aa17.63■□□□□ 0.41
PHF1-205ENST00000428274 NLGN2Q8NFZ4 835 aa17.63■□□□□ 0.41
PHF1-205ENST00000428274 LGR6Q9HBX8 967 aa17.63■□□□□ 0.41
PHF1-205ENST00000428274 KLHL34Q8N239 644 aa17.62■□□□□ 0.41
PHF1-205ENST00000428274 FLAD1Q8NFF5 587 aa17.62■□□□□ 0.41
PHF1-205ENST00000428274 UTRNP46939 3433 aa17.61■□□□□ 0.41
PHF1-205ENST00000428274 RNMTO43148 476 aaKnown RBP17.61■□□□□ 0.41
PHF1-205ENST00000428274 MAP3K5Q99683 1374 aa17.61■□□□□ 0.41
PHF1-205ENST00000428274 MRC1P22897 1456 aa17.61■□□□□ 0.41
PHF1-205ENST00000428274 GOLGB1Q14789 3259 aaKnown RBP17.6■□□□□ 0.41
PHF1-205ENST00000428274 MYH14Q7Z406 1995 aaKnown RBP17.6■□□□□ 0.41
PHF1-205ENST00000428274 AK7Q96M32 723 aa17.6■□□□□ 0.41
PHF1-205ENST00000428274 RSPH6AQ9H0K4 717 aa17.6■□□□□ 0.41
PHF1-205ENST00000428274 SLC52A2Q9HAB3 445 aa17.6■□□□□ 0.41
PHF1-205ENST00000428274 NUDCQ9Y266 331 aa17.6■□□□□ 0.41
PHF1-205ENST00000428274 COL5A3P25940 1745 aaPredicted RBP17.6■□□□□ 0.41
PHF1-205ENST00000428274 DCAF8L1A6NGE4 600 aa17.59■□□□□ 0.41
PHF1-205ENST00000428274 POLD1P28340 1107 aa17.59■□□□□ 0.41
PHF1-205ENST00000428274 PHACTR3Q96KR7 559 aa17.59■□□□□ 0.41
PHF1-205ENST00000428274 RBM42Q9BTD8 480 aaKnown RBP17.59■□□□□ 0.41
PHF1-205ENST00000428274 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.57■□□□□ 0.4
PHF1-205ENST00000428274 FCHSD2O94868 740 aa17.57■□□□□ 0.4
PHF1-205ENST00000428274 PHF14O94880 888 aa17.57■□□□□ 0.4
PHF1-205ENST00000428274 SSFA2P28290 1259 aa17.57■□□□□ 0.4
PHF1-205ENST00000428274 PRKAR2BP31323 418 aa17.57■□□□□ 0.4
PHF1-205ENST00000428274 DDX10Q13206 875 aaKnown RBP17.57■□□□□ 0.4
PHF1-205ENST00000428274 GAS2L2Q8NHY3 880 aa17.57■□□□□ 0.4
PHF1-205ENST00000428274 CICQ96RK0 1608 aaPredicted RBP17.57■□□□□ 0.4
PHF1-205ENST00000428274 PTCD1O75127 700 aaKnown RBP17.56■□□□□ 0.4
PHF1-205ENST00000428274 U2AF1L5P0DN76 240 aaPredicted RBP17.56■□□□□ 0.4
PHF1-205ENST00000428274 U2AF1Q01081 240 aaKnown RBP eCLIP17.56■□□□□ 0.4
PHF1-205ENST00000428274 RC3H1Q5TC82 1133 aaKnown RBP17.56■□□□□ 0.4
PHF1-205ENST00000428274 GNAT3A8MTJ3 354 aa17.55■□□□□ 0.4
PHF1-205ENST00000428274 GNPATO15228 680 aa17.55■□□□□ 0.4
PHF1-205ENST00000428274 IL17REQ8NFR9 667 aa17.55■□□□□ 0.4
PHF1-205ENST00000428274 TJP1Q07157 1748 aa17.55■□□□□ 0.4
PHF1-205ENST00000428274 CNTNAP4Q9C0A0 1308 aa17.54■□□□□ 0.4
PHF1-205ENST00000428274 SIPA1L3O60292 1781 aaPredicted RBP17.54■□□□□ 0.4
PHF1-205ENST00000428274 RALBP1Q15311 655 aa17.54■□□□□ 0.4
PHF1-205ENST00000428274 YBX3P16989 372 aaKnown RBP eCLIP17.53■□□□□ 0.4
PHF1-205ENST00000428274 ZEB1P37275 1124 aaPredicted RBP17.53■□□□□ 0.4
PHF1-205ENST00000428274 SLC39A6Q13433 755 aa17.53■□□□□ 0.4
PHF1-205ENST00000428274 GPR162Q16538 588 aa17.53■□□□□ 0.4
PHF1-205ENST00000428274 UBR2Q8IWV8 1755 aa17.53■□□□□ 0.4
PHF1-205ENST00000428274 CEMIPQ8WUJ3 1361 aa17.53■□□□□ 0.4
PHF1-205ENST00000428274 PELP1Q8IZL8 1130 aaKnown RBP17.52■□□□□ 0.4
PHF1-205ENST00000428274 ZNF784Q8NCA9 323 aaPredicted RBP17.52■□□□□ 0.4
PHF1-205ENST00000428274 KCPQ6ZWJ8 1503 aa17.52■□□□□ 0.39
PHF1-205ENST00000428274 RPS6KA4O75676 772 aa17.51■□□□□ 0.39
PHF1-205ENST00000428274 RTCBQ9Y3I0 505 aaKnown RBP17.51■□□□□ 0.39
PHF1-205ENST00000428274 ADRA2BP18089 450 aa17.5■□□□□ 0.39
PHF1-205ENST00000428274 CRKLP46109 303 aaKnown RBP17.5■□□□□ 0.39
PHF1-205ENST00000428274 TRAPPC3LQ5T215 181 aa17.5■□□□□ 0.39
PHF1-205ENST00000428274 TEFQ10587 303 aa17.49■□□□□ 0.39
PHF1-205ENST00000428274 DNAJC10Q8IXB1 793 aa17.49■□□□□ 0.39
PHF1-205ENST00000428274 ARHGEF1Q92888 912 aaKnown RBP17.49■□□□□ 0.39
PHF1-205ENST00000428274 INTS5Q6P9B9 1019 aaKnown RBP17.48■□□□□ 0.39
PHF1-205ENST00000428274 VSIG10Q8N0Z9 540 aa17.48■□□□□ 0.39
PHF1-205ENST00000428274 DLG5Q8TDM6 1919 aa17.48■□□□□ 0.39
PHF1-205ENST00000428274 C4AP0C0L4 1744 aa17.47■□□□□ 0.39
PHF1-205ENST00000428274 PLEKHF1Q96S99 279 aa17.47■□□□□ 0.39
PHF1-205ENST00000428274 WWC3Q9ULE0 1092 aa17.47■□□□□ 0.39
PHF1-205ENST00000428274 HTATSF1O43719 755 aaKnown RBP17.46■□□□□ 0.39
PHF1-205ENST00000428274 CYP19A1P11511 503 aaPredicted RBP17.46■□□□□ 0.39
PHF1-205ENST00000428274 ZNF790Q6PG37 636 aa17.46■□□□□ 0.39
PHF1-205ENST00000428274 ZNF496Q96IT1 587 aaPredicted RBP17.45■□□□□ 0.38
PHF1-205ENST00000428274 CCDC87Q9NVE4 849 aa17.45■□□□□ 0.38
PHF1-205ENST00000428274 CD2APQ9Y5K6 639 aa17.45■□□□□ 0.38
PHF1-205ENST00000428274 MYBBP1AQ9BQG0 1328 aaKnown RBP17.45■□□□□ 0.38
PHF1-205ENST00000428274 GYS1P13807 737 aa17.44■□□□□ 0.38
PHF1-205ENST00000428274 RFC4P35249 363 aa17.44■□□□□ 0.38
PHF1-205ENST00000428274 MCM10Q7L590 875 aa17.44■□□□□ 0.38
PHF1-205ENST00000428274 TTC5Q8N0Z6 440 aa17.44■□□□□ 0.38
PHF1-205ENST00000428274 NLGN1Q8N2Q7 840 aa17.44■□□□□ 0.38
PHF1-205ENST00000428274 RTF1Q92541 710 aaKnown RBP17.43■□□□□ 0.38
PHF1-205ENST00000428274 CHD4Q14839 1912 aa17.43■□□□□ 0.38
PHF1-205ENST00000428274 HEG1Q9ULI3 1381 aa17.42■□□□□ 0.38
PHF1-205ENST00000428274 BTBD11A6QL63 1104 aa17.42■□□□□ 0.38
PHF1-205ENST00000428274 MMP10P09238 476 aa17.42■□□□□ 0.38
PHF1-205ENST00000428274 DCTN1Q14203 1278 aa17.42■□□□□ 0.38
PHF1-205ENST00000428274 PRKRIP1Q9H875 184 aaPredicted RBP17.42■□□□□ 0.38
PHF1-205ENST00000428274 SOS1Q07889 1333 aaPredicted RBP17.42■□□□□ 0.38
PHF1-205ENST00000428274 KCNQ3O43525 872 aa17.41■□□□□ 0.38
PHF1-205ENST00000428274 PNNQ9H307 717 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms