RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 FKBP8Q14318 412 aa15.59■□□□□ 0.09
RFC4-206ENST00000427785 TAF7Q15545 349 aaPredicted RBP15.59■□□□□ 0.09
RFC4-206ENST00000427785 DDX54Q8TDD1 881 aaKnown RBP15.59■□□□□ 0.09
RFC4-206ENST00000427785 THRAP3Q9Y2W1 955 aaKnown RBP15.59■□□□□ 0.09
RFC4-206ENST00000427785 ELL2O00472 640 aaPredicted RBP15.58■□□□□ 0.08
RFC4-206ENST00000427785 PLIN1O60240 522 aa15.58■□□□□ 0.08
RFC4-206ENST00000427785 HSP90AB1P08238 724 aaKnown RBP15.58■□□□□ 0.08
RFC4-206ENST00000427785 CT47B1P0C2W7 299 aaPredicted RBP15.58■□□□□ 0.08
RFC4-206ENST00000427785 RARSP54136 660 aaKnown RBP15.58■□□□□ 0.08
RFC4-206ENST00000427785 C8orf58Q8NAV2 365 aa15.58■□□□□ 0.08
RFC4-206ENST00000427785 DCAF5Q96JK2 942 aa15.58■□□□□ 0.08
RFC4-206ENST00000427785 TWISTNBQ3B726 338 aaPredicted RBP15.57■□□□□ 0.08
RFC4-206ENST00000427785 SLC52A2Q9HAB3 445 aa15.57■□□□□ 0.08
RFC4-206ENST00000427785 FAM98CQ17RN3 349 aaKnown RBP15.56■□□□□ 0.08
RFC4-206ENST00000427785 BARGINQ6ZT62 677 aa15.56■□□□□ 0.08
RFC4-206ENST00000427785 CDCA7Q9BWT1 371 aaPredicted RBP15.56■□□□□ 0.08
RFC4-206ENST00000427785 SMC4Q9NTJ3 1288 aa15.56■□□□□ 0.08
RFC4-206ENST00000427785 SBF2Q86WG5 1849 aa15.55■□□□□ 0.08
RFC4-206ENST00000427785 BTBD11A6QL63 1104 aa15.55■□□□□ 0.08
RFC4-206ENST00000427785 KCNQ3O43525 872 aa15.55■□□□□ 0.08
RFC4-206ENST00000427785 SSH1Q8WYL5 1049 aa15.55■□□□□ 0.08
RFC4-206ENST00000427785 N4BP2Q86UW6 1770 aaPredicted RBP15.54■□□□□ 0.08
RFC4-206ENST00000427785 TCERG1O14776 1098 aaKnown RBP15.54■□□□□ 0.08
RFC4-206ENST00000427785 VAMP4O75379 141 aa15.54■□□□□ 0.08
RFC4-206ENST00000427785 NKX1-1Q15270 411 aaPredicted RBP15.54■□□□□ 0.08
RFC4-206ENST00000427785 FBXO41Q8TF61 875 aa15.54■□□□□ 0.08
RFC4-206ENST00000427785 BABAM1Q9NWV8 329 aa15.54■□□□□ 0.08
RFC4-206ENST00000427785 KCPQ6ZWJ8 1503 aa15.53■□□□□ 0.08
RFC4-206ENST00000427785 A0A0G2JS52 829 aa15.53■□□□□ 0.08
RFC4-206ENST00000427785 EXOC5O00471 708 aa15.53■□□□□ 0.08
RFC4-206ENST00000427785 CANXP27824 592 aaKnown RBP15.53■□□□□ 0.08
RFC4-206ENST00000427785 CABP4P57796 275 aa15.53■□□□□ 0.08
RFC4-206ENST00000427785 MYT1Q01538 1121 aa15.53■□□□□ 0.08
RFC4-206ENST00000427785 DDB1Q16531 1140 aa15.53■□□□□ 0.08
RFC4-206ENST00000427785 NHSQ6T4R5 1651 aa15.53■□□□□ 0.08
RFC4-206ENST00000427785 SLC39A6Q13433 755 aa15.52■□□□□ 0.08
RFC4-206ENST00000427785 C20orf194Q5TEA3 1177 aa15.52■□□□□ 0.08
RFC4-206ENST00000427785 NFATC2IPQ8NCF5 419 aa15.52■□□□□ 0.08
RFC4-206ENST00000427785 FRAT1Q92837 279 aaPredicted RBP15.52■□□□□ 0.08
RFC4-206ENST00000427785 BTAF1O14981 1849 aa15.52■□□□□ 0.07
RFC4-206ENST00000427785 EIF4A1P60842 406 aaKnown RBP15.51■□□□□ 0.07
RFC4-206ENST00000427785 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.51■□□□□ 0.07
RFC4-206ENST00000427785 TRPC5Q9UL62 973 aaPredicted RBP15.51■□□□□ 0.07
RFC4-206ENST00000427785 TJP1Q07157 1748 aa15.51■□□□□ 0.07
RFC4-206ENST00000427785 ALDH1L2Q3SY69 923 aa15.5■□□□□ 0.07
RFC4-206ENST00000427785 GJD4Q96KN9 370 aaPredicted RBP15.5■□□□□ 0.07
RFC4-206ENST00000427785 TNNQ9UQP3 1299 aa15.5■□□□□ 0.07
RFC4-206ENST00000427785 KIF16BQ96L93 1317 aa15.49■□□□□ 0.07
RFC4-206ENST00000427785 ERVV-2B6SEH9 535 aa15.49■□□□□ 0.07
RFC4-206ENST00000427785 NECTIN2Q92692 538 aa15.49■□□□□ 0.07
RFC4-206ENST00000427785 ZNF428Q96B54 188 aa15.49■□□□□ 0.07
RFC4-206ENST00000427785 ZNF790Q6PG37 636 aa15.48■□□□□ 0.07
RFC4-206ENST00000427785 MRPL50Q8N5N7 158 aaKnown RBP15.48■□□□□ 0.07
RFC4-206ENST00000427785 MARCH10Q8NA82 808 aaPredicted RBP15.48■□□□□ 0.07
RFC4-206ENST00000427785 CRBNQ96SW2 442 aa15.48■□□□□ 0.07
RFC4-206ENST00000427785 TMOD3Q9NYL9 352 aa15.48■□□□□ 0.07
RFC4-206ENST00000427785 HEG1Q9ULI3 1381 aa15.48■□□□□ 0.07
RFC4-206ENST00000427785 BCL9O00512 1426 aa15.47■□□□□ 0.07
RFC4-206ENST00000427785 TTC5Q8N0Z6 440 aa15.47■□□□□ 0.07
RFC4-206ENST00000427785 HDGFL1Q5TGJ6 251 aa15.46■□□□□ 0.07
RFC4-206ENST00000427785 ZKSCAN2Q63HK3 967 aa15.46■□□□□ 0.07
RFC4-206ENST00000427785 NOB1Q9ULX3 412 aaKnown RBP15.46■□□□□ 0.07
RFC4-206ENST00000427785 SOS1Q07889 1333 aaPredicted RBP15.45■□□□□ 0.06
RFC4-206ENST00000427785 RGS12O14924 1447 aa15.45■□□□□ 0.06
RFC4-206ENST00000427785 PRAMEF22A3QJZ6 481 aa15.45■□□□□ 0.06
RFC4-206ENST00000427785 EXOC6Q8TAG9 804 aa15.45■□□□□ 0.06
RFC4-206ENST00000427785 PANK1Q8TE04 598 aa15.45■□□□□ 0.06
RFC4-206ENST00000427785 SYTL4Q96C24 671 aaPredicted RBP15.45■□□□□ 0.06
RFC4-206ENST00000427785 ACSBG1Q96GR2 724 aa15.45■□□□□ 0.06
RFC4-206ENST00000427785 ZNF496Q96IT1 587 aaPredicted RBP15.45■□□□□ 0.06
RFC4-206ENST00000427785 QTRT2Q9H974 415 aaKnown RBP15.45■□□□□ 0.06
RFC4-206ENST00000427785 CICQ96RK0 1608 aaPredicted RBP15.45■□□□□ 0.06
RFC4-206ENST00000427785 COL5A3P25940 1745 aaPredicted RBP15.44■□□□□ 0.06
RFC4-206ENST00000427785 HOXB7P09629 217 aa15.44■□□□□ 0.06
RFC4-206ENST00000427785 RLBP1P12271 317 aa15.44■□□□□ 0.06
RFC4-206ENST00000427785 TRIM27P14373 513 aa15.44■□□□□ 0.06
RFC4-206ENST00000427785 EIF2S2P20042 333 aaKnown RBP15.44■□□□□ 0.06
RFC4-206ENST00000427785 PIGBQ92521 554 aa15.44■□□□□ 0.06
RFC4-206ENST00000427785 CLUAP1Q96AJ1 413 aa15.44■□□□□ 0.06
RFC4-206ENST00000427785 ARFGEF2Q9Y6D5 1785 aa15.44■□□□□ 0.06
RFC4-206ENST00000427785 GIGYF1O75420 1035 aaPredicted RBP15.43■□□□□ 0.06
RFC4-206ENST00000427785 BRPF1P55201 1214 aaPredicted RBP15.43■□□□□ 0.06
RFC4-206ENST00000427785 CCDC30Q5VVM6 783 aa15.43■□□□□ 0.06
RFC4-206ENST00000427785 FMNL2Q96PY5 1086 aa15.43■□□□□ 0.06
RFC4-206ENST00000427785 STK31Q9BXU1 1019 aa15.43■□□□□ 0.06
RFC4-206ENST00000427785 AFDNP55196 1824 aaKnown RBP15.43■□□□□ 0.06
RFC4-206ENST00000427785 NUP188Q5SRE5 1749 aa15.43■□□□□ 0.06
RFC4-206ENST00000427785 PRIM1P49642 420 aaKnown RBP15.42■□□□□ 0.06
RFC4-206ENST00000427785 ATF7IPQ6VMQ6 1270 aa15.42■□□□□ 0.06
RFC4-206ENST00000427785 FTSJ3Q8IY81 847 aaKnown RBP15.42■□□□□ 0.06
RFC4-206ENST00000427785 SEPT12Q8IYM1 358 aa15.42■□□□□ 0.06
RFC4-206ENST00000427785 CHPF2Q9P2E5 772 aa15.42■□□□□ 0.06
RFC4-206ENST00000427785 LY75O60449 1722 aa15.41■□□□□ 0.06
RFC4-206ENST00000427785 PDE3AQ14432 1141 aa15.41■□□□□ 0.06
RFC4-206ENST00000427785 FAM182BQ5T319 152 aa15.41■□□□□ 0.06
RFC4-206ENST00000427785 ZNF772Q68DY9 489 aaPredicted RBP15.41■□□□□ 0.06
RFC4-206ENST00000427785 G2E3Q7L622 706 aa15.41■□□□□ 0.06
RFC4-206ENST00000427785 ASAP1Q9ULH1 1129 aa15.41■□□□□ 0.06
RFC4-206ENST00000427785 COG6Q9Y2V7 657 aa15.41■□□□□ 0.06
RFC4-206ENST00000427785 IPO8O15397 1037 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms