RNA–Protein interactions for RNA: ENST00000427678.1

KDM3A-204, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-204ENST00000427678 RUNDC1Q96C34 613 aa19.7■□□□□ 0.74
KDM3A-204ENST00000427678 RBM42Q9BTD8 480 aaKnown RBP19.7■□□□□ 0.74
KDM3A-204ENST00000427678 ANO8Q9HCE9 1232 aaPredicted RBP19.7■□□□□ 0.74
KDM3A-204ENST00000427678 MRS2Q9HD23 443 aa19.7■□□□□ 0.74
KDM3A-204ENST00000427678 ATP6V1AP38606 617 aa19.69■□□□□ 0.74
KDM3A-204ENST00000427678 RGPD3A6NKT7 1758 aaPredicted RBP19.69■□□□□ 0.74
KDM3A-204ENST00000427678 RGPD4Q7Z3J3 1758 aa19.69■□□□□ 0.74
KDM3A-204ENST00000427678 PTCD1O75127 700 aaKnown RBP19.68■□□□□ 0.74
KDM3A-204ENST00000427678 MCM10Q7L590 875 aa19.68■□□□□ 0.74
KDM3A-204ENST00000427678 CCDC146Q8IYE0 955 aa19.68■□□□□ 0.74
KDM3A-204ENST00000427678 TOGARAM1Q9Y4F4 1720 aa19.68■□□□□ 0.74
KDM3A-204ENST00000427678 RIPK4P57078 832 aa19.67■□□□□ 0.74
KDM3A-204ENST00000427678 AKT1S1Q96B36 256 aa19.67■□□□□ 0.74
KDM3A-204ENST00000427678 CEMIPQ8WUJ3 1361 aa19.67■□□□□ 0.74
KDM3A-204ENST00000427678 TMPOP42166 694 aaKnown RBP19.66■□□□□ 0.74
KDM3A-204ENST00000427678 SLC39A6Q13433 755 aa19.66■□□□□ 0.74
KDM3A-204ENST00000427678 DCTN1Q14203 1278 aa19.66■□□□□ 0.74
KDM3A-204ENST00000427678 PNISRQ8TF01 805 aaKnown RBP19.66■□□□□ 0.74
KDM3A-204ENST00000427678 TFCP2L1Q9NZI6 479 aa19.66■□□□□ 0.74
KDM3A-204ENST00000427678 TTC5Q8N0Z6 440 aa19.65■□□□□ 0.74
KDM3A-204ENST00000427678 RREB1Q92766 1687 aa19.65■□□□□ 0.74
KDM3A-204ENST00000427678 BTBD11A6QL63 1104 aa19.64■□□□□ 0.73
KDM3A-204ENST00000427678 LMOD3Q0VAK6 560 aa19.64■□□□□ 0.73
KDM3A-204ENST00000427678 ZNF827Q17R98 1081 aa19.64■□□□□ 0.73
KDM3A-204ENST00000427678 ITGB4P16144 1822 aa19.64■□□□□ 0.73
KDM3A-204ENST00000427678 ITPK1Q13572 414 aa19.63■□□□□ 0.73
KDM3A-204ENST00000427678 TAF7Q15545 349 aaPredicted RBP19.63■□□□□ 0.73
KDM3A-204ENST00000427678 ZNF790Q6PG37 636 aa19.63■□□□□ 0.73
KDM3A-204ENST00000427678 SLC4A9Q96Q91 983 aa19.63■□□□□ 0.73
KDM3A-204ENST00000427678 NEUROD2Q15784 382 aa19.62■□□□□ 0.73
KDM3A-204ENST00000427678 RRP7AQ9Y3A4 280 aaKnown RBP19.62■□□□□ 0.73
KDM3A-204ENST00000427678 NUP188Q5SRE5 1749 aa19.62■□□□□ 0.73
KDM3A-204ENST00000427678 MRC1P22897 1456 aa19.61■□□□□ 0.73
KDM3A-204ENST00000427678 LINC00116Q8NCU8 138 aa19.61■□□□□ 0.73
KDM3A-204ENST00000427678 AK7Q96M32 723 aa19.61■□□□□ 0.73
KDM3A-204ENST00000427678 FLAD1Q8NFF5 587 aa19.6■□□□□ 0.73
KDM3A-204ENST00000427678 APAF1O14727 1248 aa19.59■□□□□ 0.73
KDM3A-204ENST00000427678 RC3H1Q5TC82 1133 aaKnown RBP19.59■□□□□ 0.73
KDM3A-204ENST00000427678 DIEXFQ68CQ4 756 aaKnown RBP19.59■□□□□ 0.73
KDM3A-204ENST00000427678 VSIG10Q8N0Z9 540 aa19.59■□□□□ 0.73
KDM3A-204ENST00000427678 THUMPD2Q9BTF0 503 aaKnown RBP19.59■□□□□ 0.73
KDM3A-204ENST00000427678 SCN11AQ9UI33 1791 aa19.59■□□□□ 0.73
KDM3A-204ENST00000427678 ZNF496Q96IT1 587 aaPredicted RBP19.58■□□□□ 0.72
KDM3A-204ENST00000427678 PDGFDQ9GZP0 370 aaPredicted RBP19.58■□□□□ 0.72
KDM3A-204ENST00000427678 LY75O60449 1722 aa19.58■□□□□ 0.72
KDM3A-204ENST00000427678 ADAMTS7Q9UKP4 1686 aa19.57■□□□□ 0.72
KDM3A-204ENST00000427678 FMNL2Q96PY5 1086 aa19.57■□□□□ 0.72
KDM3A-204ENST00000427678 TEX13AQ9BXU3 409 aaPredicted RBP19.57■□□□□ 0.72
KDM3A-204ENST00000427678 PNPLA7Q6ZV29 1317 aa19.56■□□□□ 0.72
KDM3A-204ENST00000427678 GNPATO15228 680 aa19.56■□□□□ 0.72
KDM3A-204ENST00000427678 MSH5O43196 834 aa19.56■□□□□ 0.72
KDM3A-204ENST00000427678 KCNQ3O43525 872 aa19.56■□□□□ 0.72
KDM3A-204ENST00000427678 DNAJC10Q8IXB1 793 aa19.56■□□□□ 0.72
KDM3A-204ENST00000427678 SLC16A10Q8TF71 515 aa19.56■□□□□ 0.72
KDM3A-204ENST00000427678 SPON1Q9HCB6 807 aa19.56■□□□□ 0.72
KDM3A-204ENST00000427678 MIS18AQ9NYP9 233 aa19.56■□□□□ 0.72
KDM3A-204ENST00000427678 STARD3NLO95772 234 aa19.55■□□□□ 0.72
KDM3A-204ENST00000427678 COL23A1Q86Y22 540 aaPredicted RBP19.55■□□□□ 0.72
KDM3A-204ENST00000427678 FAM9BQ8IZU0 186 aa19.55■□□□□ 0.72
KDM3A-204ENST00000427678 TRIM35Q9UPQ4 493 aa19.55■□□□□ 0.72
KDM3A-204ENST00000427678 RTCBQ9Y3I0 505 aaKnown RBP19.55■□□□□ 0.72
KDM3A-204ENST00000427678 CNTNAP4Q9C0A0 1308 aa19.54■□□□□ 0.72
KDM3A-204ENST00000427678 ZBTB7AO95365 584 aa19.54■□□□□ 0.72
KDM3A-204ENST00000427678 SSFA2P28290 1259 aa19.54■□□□□ 0.72
KDM3A-204ENST00000427678 MTFR1LQ9H019 292 aa19.54■□□□□ 0.72
KDM3A-204ENST00000427678 PAPPAQ13219 1627 aa19.54■□□□□ 0.72
KDM3A-204ENST00000427678 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.53■□□□□ 0.72
KDM3A-204ENST00000427678 CCER2I3L3R5 266 aa19.53■□□□□ 0.72
KDM3A-204ENST00000427678 RPS6KA4O75676 772 aa19.53■□□□□ 0.72
KDM3A-204ENST00000427678 PHF14O94880 888 aa19.53■□□□□ 0.72
KDM3A-204ENST00000427678 CYP19A1P11511 503 aaPredicted RBP19.53■□□□□ 0.72
KDM3A-204ENST00000427678 CRKLP46109 303 aaKnown RBP19.53■□□□□ 0.72
KDM3A-204ENST00000427678 TRAPPC3LQ5T215 181 aa19.53■□□□□ 0.72
KDM3A-204ENST00000427678 BABAM1Q9NWV8 329 aa19.53■□□□□ 0.72
KDM3A-204ENST00000427678 SNRPA1P09661 255 aaKnown RBP19.52■□□□□ 0.72
KDM3A-204ENST00000427678 ATF5Q9Y2D1 282 aaPredicted RBP19.52■□□□□ 0.72
KDM3A-204ENST00000427678 HEG1Q9ULI3 1381 aa19.52■□□□□ 0.72
KDM3A-204ENST00000427678 CALD1Q05682 793 aaKnown RBP19.51■□□□□ 0.71
KDM3A-204ENST00000427678 INTS5Q6P9B9 1019 aaKnown RBP19.51■□□□□ 0.71
KDM3A-204ENST00000427678 CCDC87Q9NVE4 849 aa19.51■□□□□ 0.71
KDM3A-204ENST00000427678 TSPYL4Q9UJ04 414 aa19.51■□□□□ 0.71
KDM3A-204ENST00000427678 ADRA2BP18089 450 aa19.5■□□□□ 0.71
KDM3A-204ENST00000427678 AMIGO3Q86WK7 504 aa19.5■□□□□ 0.71
KDM3A-204ENST00000427678 SMIM5Q71RC9 77 aa19.49■□□□□ 0.71
KDM3A-204ENST00000427678 KCPQ6ZWJ8 1503 aa19.49■□□□□ 0.71
KDM3A-204ENST00000427678 CHL1O00533 1208 aa19.48■□□□□ 0.71
KDM3A-204ENST00000427678 EIF4A1P60842 406 aaKnown RBP19.48■□□□□ 0.71
KDM3A-204ENST00000427678 NCBP3Q53F19 620 aaKnown RBP19.48■□□□□ 0.71
KDM3A-204ENST00000427678 LAS1LQ9Y4W2 734 aaKnown RBP19.48■□□□□ 0.71
KDM3A-204ENST00000427678 C4BP0C0L5 1744 aa19.48■□□□□ 0.71
KDM3A-204ENST00000427678 C5P01031 1676 aa19.47■□□□□ 0.71
KDM3A-204ENST00000427678 RFC4P35249 363 aa19.47■□□□□ 0.71
KDM3A-204ENST00000427678 CCDC27Q2M243 656 aa19.47■□□□□ 0.71
KDM3A-204ENST00000427678 ARHGEF1Q92888 912 aaKnown RBP19.47■□□□□ 0.71
KDM3A-204ENST00000427678 USP16Q9Y5T5 823 aa19.47■□□□□ 0.71
KDM3A-204ENST00000427678 ZNF831Q5JPB2 1677 aa19.46■□□□□ 0.71
KDM3A-204ENST00000427678 CFAP44Q96MT7 982 aa19.46■□□□□ 0.71
KDM3A-204ENST00000427678 PPP1R1BQ9UD71 204 aaPredicted RBP19.46■□□□□ 0.71
KDM3A-204ENST00000427678 GIGYF1O75420 1035 aaPredicted RBP19.45■□□□□ 0.7
KDM3A-204ENST00000427678 CANXP27824 592 aaKnown RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms