RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 POLR3DP05423 398 aaPredicted RBP21■□□□□ 0.95
ARHGEF28-203ENST00000426542 JAKMIP3Q5VZ66 844 aa21■□□□□ 0.95
ARHGEF28-203ENST00000426542 HECW1Q76N89 1606 aa20.99■□□□□ 0.95
ARHGEF28-203ENST00000426542 GBP2P32456 591 aaPredicted RBP20.99■□□□□ 0.95
ARHGEF28-203ENST00000426542 DHX37Q8IY37 1157 aaKnown RBP20.99■□□□□ 0.95
ARHGEF28-203ENST00000426542 RAB11FIP3O75154 756 aa20.99■□□□□ 0.95
ARHGEF28-203ENST00000426542 HSP90AB3PQ58FF7 597 aa20.99■□□□□ 0.95
ARHGEF28-203ENST00000426542 IL27Q8NEV9 243 aa20.99■□□□□ 0.95
ARHGEF28-203ENST00000426542 ZNF397Q8NF99 534 aaPredicted RBP20.99■□□□□ 0.95
ARHGEF28-203ENST00000426542 U3KPZ7 1027 aaPredicted RBP20.99■□□□□ 0.95
ARHGEF28-203ENST00000426542 GOLGA6L7A0A1B0GV03 622 aa20.99■□□□□ 0.95
ARHGEF28-203ENST00000426542 SYCE3A1L190 88 aa20.99■□□□□ 0.95
ARHGEF28-203ENST00000426542 FERMT3Q86UX7 667 aa20.99■□□□□ 0.95
ARHGEF28-203ENST00000426542 CCDC184Q52MB2 194 aa20.99■□□□□ 0.95
ARHGEF28-203ENST00000426542 PTCD1O75127 700 aaKnown RBP20.98■□□□□ 0.95
ARHGEF28-203ENST00000426542 BOLA2Q9H3K6 86 aa20.98■□□□□ 0.95
ARHGEF28-203ENST00000426542 ARHGAP29Q52LW3 1261 aa20.98■□□□□ 0.95
ARHGEF28-203ENST00000426542 CAVIN4Q5BKX8 364 aa20.98■□□□□ 0.95
ARHGEF28-203ENST00000426542 KCNH5Q8NCM2 988 aa20.98■□□□□ 0.95
ARHGEF28-203ENST00000426542 DAPK1P53355 1430 aa20.98■□□□□ 0.95
ARHGEF28-203ENST00000426542 CCDC102AQ96A19 550 aa20.97■□□□□ 0.95
ARHGEF28-203ENST00000426542 TMOD3Q9NYL9 352 aa20.97■□□□□ 0.95
ARHGEF28-203ENST00000426542 EFCAB5A4FU69 1503 aa20.97■□□□□ 0.95
ARHGEF28-203ENST00000426542 GLRX3O76003 335 aaKnown RBP20.97■□□□□ 0.95
ARHGEF28-203ENST00000426542 MKNK2Q9HBH9 465 aa20.97■□□□□ 0.95
ARHGEF28-203ENST00000426542 ZNF287Q9HBT7 754 aa20.97■□□□□ 0.95
ARHGEF28-203ENST00000426542 ZNF652Q9Y2D9 606 aa20.97■□□□□ 0.95
ARHGEF28-203ENST00000426542 CCDC148Q8NFR7 591 aa20.97■□□□□ 0.95
ARHGEF28-203ENST00000426542 IFIT1P09914 478 aaKnown RBP20.96■□□□□ 0.95
ARHGEF28-203ENST00000426542 CRACR2BQ8N4Y2 399 aaPredicted RBP20.96■□□□□ 0.95
ARHGEF28-203ENST00000426542 PDIA4P13667 645 aaKnown RBP20.96■□□□□ 0.95
ARHGEF28-203ENST00000426542 LARP1Q6PKG0 1096 aaKnown RBP20.96■□□□□ 0.95
ARHGEF28-203ENST00000426542 EZRP15311 586 aaKnown RBP20.95■□□□□ 0.94
ARHGEF28-203ENST00000426542 USHBP1Q8N6Y0 703 aa20.95■□□□□ 0.94
ARHGEF28-203ENST00000426542 TROQ12816 1431 aaPredicted RBP20.95■□□□□ 0.94
ARHGEF28-203ENST00000426542 PPP1R12BO60237 982 aaPredicted RBP20.95■□□□□ 0.94
ARHGEF28-203ENST00000426542 TNIP1Q15025 636 aa20.95■□□□□ 0.94
ARHGEF28-203ENST00000426542 ZPR1O75312 459 aa20.95■□□□□ 0.94
ARHGEF28-203ENST00000426542 TAF3Q5VWG9 929 aa20.94■□□□□ 0.94
ARHGEF28-203ENST00000426542 POTEJP0CG39 1038 aa20.94■□□□□ 0.94
ARHGEF28-203ENST00000426542 NAPBQ9H115 298 aa20.94■□□□□ 0.94
ARHGEF28-203ENST00000426542 ANKIB1Q9P2G1 1089 aa20.94■□□□□ 0.94
ARHGEF28-203ENST00000426542 CCDC61Q9Y6R9 512 aa20.94■□□□□ 0.94
ARHGEF28-203ENST00000426542 KLHL10Q6JEL2 608 aa20.93■□□□□ 0.94
ARHGEF28-203ENST00000426542 SUPT6HQ7KZ85 1726 aaKnown RBP20.93■□□□□ 0.94
ARHGEF28-203ENST00000426542 WAPLQ7Z5K2 1190 aa20.93■□□□□ 0.94
ARHGEF28-203ENST00000426542 POGZQ7Z3K3 1410 aa20.92■□□□□ 0.94
ARHGEF28-203ENST00000426542 SPA17Q15506 151 aa20.92■□□□□ 0.94
ARHGEF28-203ENST00000426542 DZIP1Q86YF9 867 aaKnown RBP20.92■□□□□ 0.94
ARHGEF28-203ENST00000426542 TSG101Q99816 390 aa20.92■□□□□ 0.94
ARHGEF28-203ENST00000426542 GUCY1B3Q02153 619 aa20.92■□□□□ 0.94
ARHGEF28-203ENST00000426542 TAF7Q15545 349 aaPredicted RBP20.91■□□□□ 0.94
ARHGEF28-203ENST00000426542 UBA5Q9GZZ9 404 aa20.91■□□□□ 0.94
ARHGEF28-203ENST00000426542 CCDC8Q9H0W5 538 aaPredicted RBP20.91■□□□□ 0.94
ARHGEF28-203ENST00000426542 TRIM21P19474 475 aaKnown RBP20.91■□□□□ 0.94
ARHGEF28-203ENST00000426542 FKBP15Q5T1M5 1219 aa20.91■□□□□ 0.94
ARHGEF28-203ENST00000426542 RANBP6O60518 1105 aaKnown RBP20.9■□□□□ 0.94
ARHGEF28-203ENST00000426542 CHMP4BP1P59074 171 aa20.9■□□□□ 0.94
ARHGEF28-203ENST00000426542 C8orf76Q96K31 380 aa20.9■□□□□ 0.94
ARHGEF28-203ENST00000426542 SCLT1Q96NL6 688 aa20.9■□□□□ 0.94
ARHGEF28-203ENST00000426542 CCDC82Q8N4S0 544 aa20.9■□□□□ 0.94
ARHGEF28-203ENST00000426542 UBXN4Q92575 508 aa20.9■□□□□ 0.94
ARHGEF28-203ENST00000426542 ANO10Q9NW15 660 aa20.9■□□□□ 0.94
ARHGEF28-203ENST00000426542 MAP3K12Q12852 859 aa20.89■□□□□ 0.94
ARHGEF28-203ENST00000426542 IFIT5Q13325 482 aaKnown RBP20.89■□□□□ 0.94
ARHGEF28-203ENST00000426542 CCDC196A0A1B0GTZ2 297 aa20.89■□□□□ 0.93
ARHGEF28-203ENST00000426542 CCDC96Q2M329 555 aa20.89■□□□□ 0.93
ARHGEF28-203ENST00000426542 ALDH1L2Q3SY69 923 aa20.89■□□□□ 0.93
ARHGEF28-203ENST00000426542 CTCFLQ8NI51 663 aaPredicted RBP20.89■□□□□ 0.93
ARHGEF28-203ENST00000426542 SLC12A7Q9Y666 1083 aa20.89■□□□□ 0.93
ARHGEF28-203ENST00000426542 F6X3S4 739 aa20.89■□□□□ 0.93
ARHGEF28-203ENST00000426542 SLC5A1P13866 664 aa20.89■□□□□ 0.93
ARHGEF28-203ENST00000426542 SSH1Q8WYL5 1049 aa20.89■□□□□ 0.93
ARHGEF28-203ENST00000426542 SFPQP23246 707 aaKnown RBP eCLIP20.88■□□□□ 0.93
ARHGEF28-203ENST00000426542 CCDC183Q5T5S1 534 aa20.88■□□□□ 0.93
ARHGEF28-203ENST00000426542 CACNA2D4Q7Z3S7 1137 aa20.88■□□□□ 0.93
ARHGEF28-203ENST00000426542 ESPNB1AK53 854 aa20.88■□□□□ 0.93
ARHGEF28-203ENST00000426542 ZNF444Q8N0Y2 327 aaPredicted RBP20.88■□□□□ 0.93
ARHGEF28-203ENST00000426542 WDR97A6NE52 1622 aa20.88■□□□□ 0.93
ARHGEF28-203ENST00000426542 CASQ1P31415 396 aa20.88■□□□□ 0.93
ARHGEF28-203ENST00000426542 MRC2Q9UBG0 1479 aa20.88■□□□□ 0.93
ARHGEF28-203ENST00000426542 ZNF213O14771 459 aa20.88■□□□□ 0.93
ARHGEF28-203ENST00000426542 CETN2P41208 172 aa20.88■□□□□ 0.93
ARHGEF28-203ENST00000426542 PPP4R3AQ6IN85 833 aa20.87■□□□□ 0.93
ARHGEF28-203ENST00000426542 SSRP1Q08945 709 aaKnown RBP20.87■□□□□ 0.93
ARHGEF28-203ENST00000426542 SH2B1Q9NRF2 756 aaPredicted RBP20.87■□□□□ 0.93
ARHGEF28-203ENST00000426542 NCAPD3P42695 1498 aa20.87■□□□□ 0.93
ARHGEF28-203ENST00000426542 MPRIPQ6WCQ1 1025 aa20.87■□□□□ 0.93
ARHGEF28-203ENST00000426542 TRMT112Q9UI30 125 aaKnown RBP20.87■□□□□ 0.93
ARHGEF28-203ENST00000426542 RARSP54136 660 aaKnown RBP20.87■□□□□ 0.93
ARHGEF28-203ENST00000426542 PHAXQ9H814 394 aaKnown RBP20.87■□□□□ 0.93
ARHGEF28-203ENST00000426542 SYNJ1O43426 1573 aa20.87■□□□□ 0.93
ARHGEF28-203ENST00000426542 NME9Q86XW9 330 aa20.86■□□□□ 0.93
ARHGEF28-203ENST00000426542 ERICH4A6NGS2 130 aa20.86■□□□□ 0.93
ARHGEF28-203ENST00000426542 ZSCAN12O43309 604 aa20.86■□□□□ 0.93
ARHGEF28-203ENST00000426542 HMGB1P09429 215 aaKnown RBP20.86■□□□□ 0.93
ARHGEF28-203ENST00000426542 AMOTQ4VCS5 1084 aa20.86■□□□□ 0.93
ARHGEF28-203ENST00000426542 IFT140Q96RY7 1462 aa20.86■□□□□ 0.93
ARHGEF28-203ENST00000426542 SNAPC4Q5SXM2 1469 aa20.86■□□□□ 0.93
ARHGEF28-203ENST00000426542 PTPN14Q15678 1187 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms