RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.11■■□□□ 1.131e-323■□□□□ 8.7
FN1-208ENST00000426059 COL22A1Q8NFW1 1626 aaPredicted RBP22.11■■□□□ 1.13
FN1-208ENST00000426059 EIF4A1P60842 406 aaKnown RBP22.11■■□□□ 1.13
FN1-208ENST00000426059 G2E3Q7L622 706 aa22.11■■□□□ 1.13
FN1-208ENST00000426059 ARHGAP45Q92619 1136 aa22.11■■□□□ 1.13
FN1-208ENST00000426059 KDM3BQ7LBC6 1761 aa22.1■■□□□ 1.13
FN1-208ENST00000426059 OVOS2A0A0G2JMS6 1433 aa22.1■■□□□ 1.13
FN1-208ENST00000426059 PKD1L3Q7Z443 1732 aa22.09■■□□□ 1.13
FN1-208ENST00000426059 DDX19BQ9UMR2 479 aa22.09■■□□□ 1.13
FN1-208ENST00000426059 NFATC2IPQ8NCF5 419 aa22.09■■□□□ 1.13
FN1-208ENST00000426059 SCN11AQ9UI33 1791 aa22.08■■□□□ 1.13
FN1-208ENST00000426059 IL2RBP14784 551 aa22.08■■□□□ 1.13
FN1-208ENST00000426059 EIF2S2P20042 333 aaKnown RBP22.08■■□□□ 1.13
FN1-208ENST00000426059 SLC39A6Q13433 755 aa22.07■■□□□ 1.12
FN1-208ENST00000426059 CENPQQ7L2Z9 268 aaPredicted RBP22.07■■□□□ 1.12
FN1-208ENST00000426059 ZCRB1Q8TBF4 217 aaKnown RBP22.07■■□□□ 1.12
FN1-208ENST00000426059 SIPA1L3O60292 1781 aaPredicted RBP22.07■■□□□ 1.12
FN1-208ENST00000426059 ADAMTS7Q9UKP4 1686 aa22.07■■□□□ 1.12
FN1-208ENST00000426059 PARP4Q9UKK3 1724 aaKnown RBP22.07■■□□□ 1.12
FN1-208ENST00000426059 DDX54Q8TDD1 881 aaKnown RBP22.06■■□□□ 1.12
FN1-208ENST00000426059 ABCC4O15439 1325 aa22.06■■□□□ 1.12
FN1-208ENST00000426059 COL14A1Q05707 1796 aaKnown RBP22.06■■□□□ 1.12
FN1-208ENST00000426059 STK31Q9BXU1 1019 aa22.06■■□□□ 1.12
FN1-208ENST00000426059 API5Q9BZZ5 524 aaKnown RBP22.06■■□□□ 1.12
FN1-208ENST00000426059 SLC52A2Q9HAB3 445 aa22.06■■□□□ 1.12
FN1-208ENST00000426059 PRAMEF22A3QJZ6 481 aa22.05■■□□□ 1.12
FN1-208ENST00000426059 HDGFL1Q5TGJ6 251 aa22.05■■□□□ 1.12
FN1-208ENST00000426059 CCDC30Q5VVM6 783 aa22.05■■□□□ 1.12
FN1-208ENST00000426059 DCAF5Q96JK2 942 aa22.04■■□□□ 1.12
FN1-208ENST00000426059 RGS12O14924 1447 aa22.04■■□□□ 1.12
FN1-208ENST00000426059 ZBTB40Q9NUA8 1239 aa22.04■■□□□ 1.12
FN1-208ENST00000426059 F6X3S4 739 aa22.03■■□□□ 1.12
FN1-208ENST00000426059 PCDH11XQ9BZA7 1347 aa22.02■■□□□ 1.12
FN1-208ENST00000426059 PCDH11YQ9BZA8 1340 aa22.02■■□□□ 1.12
FN1-208ENST00000426059 ZBTB7BO15156 539 aaPredicted RBP22.02■■□□□ 1.12
FN1-208ENST00000426059 C1orf115Q9H7X2 142 aa22.02■■□□□ 1.12
FN1-208ENST00000426059 ANXA1P04083 346 aa22.01■■□□□ 1.11
FN1-208ENST00000426059 AAMPQ13685 434 aa22.01■■□□□ 1.11
FN1-208ENST00000426059 PTPRCP08575 1304 aa22.01■■□□□ 1.11
FN1-208ENST00000426059 ZNF790Q6PG37 636 aa22.01■■□□□ 1.11
FN1-208ENST00000426059 PHAXQ9H814 394 aaKnown RBP22.01■■□□□ 1.11
FN1-208ENST00000426059 FLIIQ13045 1269 aa22■■□□□ 1.11
FN1-208ENST00000426059 SLC4A10Q6U841 1118 aa22■■□□□ 1.11
FN1-208ENST00000426059 SHANK3Q9BYB0 1731 aa22■■□□□ 1.11
FN1-208ENST00000426059 GIGYF1O75420 1035 aaPredicted RBP21.99■■□□□ 1.11
FN1-208ENST00000426059 CABP4P57796 275 aa21.99■■□□□ 1.11
FN1-208ENST00000426059 CHPF2Q9P2E5 772 aa21.99■■□□□ 1.11
FN1-208ENST00000426059 HSP90AB1P08238 724 aaKnown RBP21.99■■□□□ 1.11
FN1-208ENST00000426059 FKBP5Q13451 457 aaPredicted RBP21.99■■□□□ 1.11
FN1-208ENST00000426059 PLCH1Q4KWH8 1693 aa21.99■■□□□ 1.11
FN1-208ENST00000426059 PLEKHG2Q9H7P9 1386 aa21.99■■□□□ 1.11
FN1-208ENST00000426059 CERKQ8TCT0 537 aa21.98■■□□□ 1.11
FN1-208ENST00000426059 SOS1Q07889 1333 aaPredicted RBP21.98■■□□□ 1.11
FN1-208ENST00000426059 INTS3Q68E01 1043 aaKnown RBP21.97■■□□□ 1.11
FN1-208ENST00000426059 HEG1Q9ULI3 1381 aa21.96■■□□□ 1.11
FN1-208ENST00000426059 ZNF496Q96IT1 587 aaPredicted RBP21.96■■□□□ 1.11
FN1-208ENST00000426059 RWDD1Q9H446 243 aaPredicted RBP21.96■■□□□ 1.11
FN1-208ENST00000426059 CACNA1FO60840 1977 aa21.96■■□□□ 1.11
FN1-208ENST00000426059 HOXB7P09629 217 aa21.95■■□□□ 1.1
FN1-208ENST00000426059 RGS3P49796 1198 aa21.95■■□□□ 1.1
FN1-208ENST00000426059 MRC1P22897 1456 aa21.94■■□□□ 1.1
FN1-208ENST00000426059 PROSER3Q2NL68 480 aa21.94■■□□□ 1.1
FN1-208ENST00000426059 TTC5Q8N0Z6 440 aa21.94■■□□□ 1.1
FN1-208ENST00000426059 NKX1-1Q15270 411 aaPredicted RBP21.92■■□□□ 1.1
FN1-208ENST00000426059 KAT6BQ8WYB5 2073 aa21.92■■□□□ 1.1
FN1-208ENST00000426059 C5P01031 1676 aa21.92■■□□□ 1.1
FN1-208ENST00000426059 MEIS3Q99687 375 aa21.91■■□□□ 1.1
FN1-208ENST00000426059 DISP2A7MBM2 1401 aa21.91■■□□□ 1.1
FN1-208ENST00000426059 NRAPQ86VF7 1730 aa21.91■■□□□ 1.1
FN1-208ENST00000426059 C8orf37Q96NL8 207 aa21.91■■□□□ 1.1
FN1-208ENST00000426059 CCDC9Q9Y3X0 531 aaKnown RBP21.91■■□□□ 1.1
FN1-208ENST00000426059 DBF4Q9UBU7 674 aaPredicted RBP21.9■■□□□ 1.1
FN1-208ENST00000426059 ERVV-2B6SEH9 535 aa21.89■■□□□ 1.1
FN1-208ENST00000426059 PIP4K2AP48426 406 aaPredicted RBP21.89■■□□□ 1.1
FN1-208ENST00000426059 HDAC1Q13547 482 aaPredicted RBP21.89■■□□□ 1.1
FN1-208ENST00000426059 USP16Q9Y5T5 823 aa21.89■■□□□ 1.1
FN1-208ENST00000426059 SPATA31A1Q5TZJ5 1347 aa21.89■■□□□ 1.09
FN1-208ENST00000426059 TOGARAM1Q9Y4F4 1720 aa21.89■■□□□ 1.09
FN1-208ENST00000426059 JCADQ9P266 1359 aa21.88■■□□□ 1.09
FN1-208ENST00000426059 SIRT2Q8IXJ6 389 aa21.88■■□□□ 1.09
FN1-208ENST00000426059 CHMP4BQ9H444 224 aaKnown RBP21.88■■□□□ 1.09
FN1-208ENST00000426059 RBM19Q9Y4C8 960 aaKnown RBP21.88■■□□□ 1.09
FN1-208ENST00000426059 EXOC5O00471 708 aa21.88■■□□□ 1.09
FN1-208ENST00000426059 PDZRN3Q9UPQ7 1066 aa21.88■■□□□ 1.09
FN1-208ENST00000426059 NGLY1Q96IV0 654 aa21.87■■□□□ 1.09
FN1-208ENST00000426059 FMNL2Q96PY5 1086 aa21.87■■□□□ 1.09
FN1-208ENST00000426059 PI4KAP2A4QPH2 592 aa21.87■■□□□ 1.09
FN1-208ENST00000426059 PTCD1O75127 700 aaKnown RBP21.87■■□□□ 1.09
FN1-208ENST00000426059 CCT4P50991 539 aaKnown RBP21.87■■□□□ 1.09
FN1-208ENST00000426059 PI4KAP1Q8N8J0 262 aa21.87■■□□□ 1.09
FN1-208ENST00000426059 SLIT2O94813 1529 aa21.86■■□□□ 1.09
FN1-208ENST00000426059 MYL6BP14649 208 aa21.86■■□□□ 1.09
FN1-208ENST00000426059 PDIA6Q15084 440 aa21.86■■□□□ 1.09
FN1-208ENST00000426059 SNRPA1P09661 255 aaKnown RBP21.85■■□□□ 1.09
FN1-208ENST00000426059 AIMP1Q12904 312 aaKnown RBP21.85■■□□□ 1.09
FN1-208ENST00000426059 WNK3Q9BYP7 1800 aa21.85■■□□□ 1.09
FN1-208ENST00000426059 HSPA1LP34931 641 aa21.84■■□□□ 1.09
FN1-208ENST00000426059 CHMP4AQ9BY43 222 aa21.84■■□□□ 1.09
FN1-208ENST00000426059 TMOD3Q9NYL9 352 aa21.84■■□□□ 1.09
FN1-208ENST00000426059 SPATA31A5Q5VU36 1347 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms