RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 GAS2L2Q8NHY3 880 aa24.73■■□□□ 1.55
MSH5-207ENST00000425703 ATP6V1AP38606 617 aa24.72■■□□□ 1.55
MSH5-207ENST00000425703 RSPH6AQ9H0K4 717 aa24.72■■□□□ 1.55
MSH5-207ENST00000425703 RNMTO43148 476 aaKnown RBP24.71■■□□□ 1.55
MSH5-207ENST00000425703 FCHSD2O94868 740 aa24.71■■□□□ 1.55
MSH5-207ENST00000425703 SLC52A2Q9HAB3 445 aa24.71■■□□□ 1.55
MSH5-207ENST00000425703 U2AF1L5P0DN76 240 aaPredicted RBP24.7■■□□□ 1.54
MSH5-207ENST00000425703 U2AF1Q01081 240 aaKnown RBP eCLIP24.7■■□□□ 1.544e-10■■■□□ 19.2
MSH5-207ENST00000425703 ITPK1Q13572 414 aa24.7■■□□□ 1.54
MSH5-207ENST00000425703 AK7Q96M32 723 aa24.7■■□□□ 1.54
MSH5-207ENST00000425703 LGR6Q9HBX8 967 aa24.7■■□□□ 1.54
MSH5-207ENST00000425703 TAF1LQ8IZX4 1826 aa24.7■■□□□ 1.54
MSH5-207ENST00000425703 MRC1P22897 1456 aa24.7■■□□□ 1.54
MSH5-207ENST00000425703 C4BP0C0L5 1744 aa24.69■■□□□ 1.54
MSH5-207ENST00000425703 PRKAR2BP31323 418 aa24.69■■□□□ 1.54
MSH5-207ENST00000425703 COL23A1Q86Y22 540 aaPredicted RBP24.69■■□□□ 1.54
MSH5-207ENST00000425703 LINC00116Q8NCU8 138 aa24.69■■□□□ 1.54
MSH5-207ENST00000425703 SCN11AQ9UI33 1791 aa24.69■■□□□ 1.54
MSH5-207ENST00000425703 ZNF831Q5JPB2 1677 aa24.69■■□□□ 1.54
MSH5-207ENST00000425703 ADAMTS7Q9UKP4 1686 aa24.68■■□□□ 1.54
MSH5-207ENST00000425703 MAP3K5Q99683 1374 aa24.67■■□□□ 1.54
MSH5-207ENST00000425703 GNAT3A8MTJ3 354 aa24.67■■□□□ 1.54
MSH5-207ENST00000425703 SLC4A9Q96Q91 983 aa24.67■■□□□ 1.54
MSH5-207ENST00000425703 RBM42Q9BTD8 480 aaKnown RBP24.67■■□□□ 1.54
MSH5-207ENST00000425703 TUBGCP6Q96RT7 1819 aa24.67■■□□□ 1.54
MSH5-207ENST00000425703 SSFA2P28290 1259 aa24.66■■□□□ 1.54
MSH5-207ENST00000425703 PHACTR3Q96KR7 559 aa24.66■■□□□ 1.54
MSH5-207ENST00000425703 POLD1P28340 1107 aa24.64■■□□□ 1.54
MSH5-207ENST00000425703 RC3H1Q5TC82 1133 aaKnown RBP24.64■■□□□ 1.54
MSH5-207ENST00000425703 ARXQ96QS3 562 aa24.64■■□□□ 1.54
MSH5-207ENST00000425703 MSH5O43196 834 aa24.63■■□□□ 1.53
MSH5-207ENST00000425703 COL24A1Q17RW2 1714 aa24.62■■□□□ 1.53
MSH5-207ENST00000425703 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.62■■□□□ 1.53
MSH5-207ENST00000425703 PTCD1O75127 700 aaKnown RBP24.62■■□□□ 1.53
MSH5-207ENST00000425703 CNTNAP4Q9C0A0 1308 aa24.61■■□□□ 1.53
MSH5-207ENST00000425703 GNPATO15228 680 aa24.61■■□□□ 1.53
MSH5-207ENST00000425703 AMIGO3Q86WK7 504 aa24.61■■□□□ 1.53
MSH5-207ENST00000425703 IL17REQ8NFR9 667 aa24.61■■□□□ 1.53
MSH5-207ENST00000425703 CEMIPQ8WUJ3 1361 aa24.6■■□□□ 1.53
MSH5-207ENST00000425703 MYBBP1AQ9BQG0 1328 aaKnown RBP24.6■■□□□ 1.53
MSH5-207ENST00000425703 TEFQ10587 303 aa24.59■■□□□ 1.53
MSH5-207ENST00000425703 FHDC1Q9C0D6 1143 aaPredicted RBP24.59■■□□□ 1.53
MSH5-207ENST00000425703 UBR3Q6ZT12 1888 aa24.59■■□□□ 1.53
MSH5-207ENST00000425703 CICQ96RK0 1608 aaPredicted RBP24.58■■□□□ 1.53
MSH5-207ENST00000425703 PHF14O94880 888 aa24.58■■□□□ 1.53
MSH5-207ENST00000425703 ADRA2BP18089 450 aa24.58■■□□□ 1.53
MSH5-207ENST00000425703 SYT17Q9BSW7 474 aa24.58■■□□□ 1.53
MSH5-207ENST00000425703 RTCBQ9Y3I0 505 aaKnown RBP24.58■■□□□ 1.53
MSH5-207ENST00000425703 HTATSF1O43719 755 aaKnown RBP24.57■■□□□ 1.52
MSH5-207ENST00000425703 PNNQ9H307 717 aaKnown RBP24.57■■□□□ 1.52
MSH5-207ENST00000425703 NEFMP07197 916 aa24.56■■□□□ 1.52
MSH5-207ENST00000425703 SLC39A6Q13433 755 aa24.56■■□□□ 1.52
MSH5-207ENST00000425703 VSIG10Q8N0Z9 540 aa24.56■■□□□ 1.52
MSH5-207ENST00000425703 RPS6KA4O75676 772 aa24.55■■□□□ 1.52
MSH5-207ENST00000425703 COL5A3P25940 1745 aaPredicted RBP24.55■■□□□ 1.52
MSH5-207ENST00000425703 CRKLP46109 303 aaKnown RBP24.54■■□□□ 1.52
MSH5-207ENST00000425703 TRAPPC3LQ5T215 181 aa24.54■■□□□ 1.52
MSH5-207ENST00000425703 TTC5Q8N0Z6 440 aa24.54■■□□□ 1.52
MSH5-207ENST00000425703 RTF1Q92541 710 aaKnown RBP24.54■■□□□ 1.52
MSH5-207ENST00000425703 PLEKHF1Q96S99 279 aa24.54■■□□□ 1.52
MSH5-207ENST00000425703 KCPQ6ZWJ8 1503 aa24.54■■□□□ 1.52
MSH5-207ENST00000425703 DCAF8L1A6NGE4 600 aa24.52■■□□□ 1.52
MSH5-207ENST00000425703 MSL1Q68DK7 614 aa24.52■■□□□ 1.52
MSH5-207ENST00000425703 ZNF790Q6PG37 636 aa24.52■■□□□ 1.52
MSH5-207ENST00000425703 SMIM5Q71RC9 77 aa24.52■■□□□ 1.52
MSH5-207ENST00000425703 PRKRIP1Q9H875 184 aaPredicted RBP24.52■■□□□ 1.52
MSH5-207ENST00000425703 VIRMAQ69YN4 1812 aaKnown RBP24.51■■□□□ 1.51
MSH5-207ENST00000425703 DNAJC10Q8IXB1 793 aa24.51■■□□□ 1.51
MSH5-207ENST00000425703 TJP1Q07157 1748 aa24.5■■□□□ 1.51
MSH5-207ENST00000425703 CYP19A1P11511 503 aaPredicted RBP24.49■■□□□ 1.51
MSH5-207ENST00000425703 INTS5Q6P9B9 1019 aaKnown RBP24.49■■□□□ 1.51
MSH5-207ENST00000425703 ARHGEF1Q92888 912 aaKnown RBP24.49■■□□□ 1.51
MSH5-207ENST00000425703 CCDC87Q9NVE4 849 aa24.48■■□□□ 1.51
MSH5-207ENST00000425703 SIPA1L3O60292 1781 aaPredicted RBP24.47■■□□□ 1.51
MSH5-207ENST00000425703 UBR2Q8IWV8 1755 aa24.47■■□□□ 1.51
MSH5-207ENST00000425703 MAPK8IP3Q9UPT6 1336 aa24.47■■□□□ 1.51
MSH5-207ENST00000425703 BTBD11A6QL63 1104 aa24.47■■□□□ 1.51
MSH5-207ENST00000425703 RFC4P35249 363 aa24.47■■□□□ 1.51
MSH5-207ENST00000425703 MCM10Q7L590 875 aa24.47■■□□□ 1.51
MSH5-207ENST00000425703 NLGN1Q8N2Q7 840 aa24.47■■□□□ 1.51
MSH5-207ENST00000425703 ZNF496Q96IT1 587 aaPredicted RBP24.47■■□□□ 1.51
MSH5-207ENST00000425703 TEX13AQ9BXU3 409 aaPredicted RBP24.47■■□□□ 1.51
MSH5-207ENST00000425703 MYH14Q7Z406 1995 aaKnown RBP24.46■■□□□ 1.51
MSH5-207ENST00000425703 ZNF316A6NFI3 1004 aaPredicted RBP24.46■■□□□ 1.51
MSH5-207ENST00000425703 NFE2L2Q16236 605 aa24.46■■□□□ 1.51
MSH5-207ENST00000425703 FMNL2Q96PY5 1086 aa24.46■■□□□ 1.51
MSH5-207ENST00000425703 HEG1Q9ULI3 1381 aa24.45■■□□□ 1.5
MSH5-207ENST00000425703 STARD3NLO95772 234 aa24.45■■□□□ 1.5
MSH5-207ENST00000425703 CD2APQ9Y5K6 639 aa24.45■■□□□ 1.5
MSH5-207ENST00000425703 SOS1Q07889 1333 aaPredicted RBP24.42■■□□□ 1.5
MSH5-207ENST00000425703 GYS1P13807 737 aa24.42■■□□□ 1.5
MSH5-207ENST00000425703 DCTN1Q14203 1278 aa24.42■■□□□ 1.5
MSH5-207ENST00000425703 TAF7Q15545 349 aaPredicted RBP24.42■■□□□ 1.5
MSH5-207ENST00000425703 KLHL34Q8N239 644 aa24.42■■□□□ 1.5
MSH5-207ENST00000425703 USP42Q9H9J4 1324 aaKnown RBP24.41■■□□□ 1.5
MSH5-207ENST00000425703 MMP10P09238 476 aa24.4■■□□□ 1.5
MSH5-207ENST00000425703 WDR43Q15061 677 aaKnown RBP eCLIP24.4■■□□□ 1.5
MSH5-207ENST00000425703 ZBTB1Q9Y2K1 713 aa24.4■■□□□ 1.5
MSH5-207ENST00000425703 PNISRQ8TF01 805 aaKnown RBP24.39■■□□□ 1.49
MSH5-207ENST00000425703 KCNQ3O43525 872 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms