RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 POLD1P28340 1107 aa29.11■■■□□ 2.25
CDCP1-202ENST00000425231 CABP4P57796 275 aa29.11■■■□□ 2.25
CDCP1-202ENST00000425231 FLAD1Q8NFF5 587 aa29.11■■■□□ 2.25
CDCP1-202ENST00000425231 ATP6V1AP38606 617 aa29.1■■■□□ 2.25
CDCP1-202ENST00000425231 AK7Q96M32 723 aa29.1■■■□□ 2.25
CDCP1-202ENST00000425231 MAP3K5Q99683 1374 aa29.1■■■□□ 2.25
CDCP1-202ENST00000425231 UBR3Q6ZT12 1888 aa29.09■■■□□ 2.25
CDCP1-202ENST00000425231 AKAP4Q5JQC9 854 aa29.08■■■□□ 2.25
CDCP1-202ENST00000425231 SLC4A9Q96Q91 983 aa29.08■■■□□ 2.25
CDCP1-202ENST00000425231 NFATC2IPQ8NCF5 419 aa29.07■■■□□ 2.24
CDCP1-202ENST00000425231 DCAF8L1A6NGE4 600 aa29.06■■■□□ 2.24
CDCP1-202ENST00000425231 SMIM5Q71RC9 77 aa29.06■■■□□ 2.24
CDCP1-202ENST00000425231 SCN11AQ9UI33 1791 aa29.06■■■□□ 2.24
CDCP1-202ENST00000425231 ZNF831Q5JPB2 1677 aa29.05■■■□□ 2.24
CDCP1-202ENST00000425231 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.03■■■□□ 2.24
CDCP1-202ENST00000425231 MTHFSDQ2M296 383 aaKnown RBP29.03■■■□□ 2.24
CDCP1-202ENST00000425231 MSL1Q68DK7 614 aa29.03■■■□□ 2.24
CDCP1-202ENST00000425231 RBM42Q9BTD8 480 aaKnown RBP29.03■■■□□ 2.24
CDCP1-202ENST00000425231 PHF14O94880 888 aa29.03■■■□□ 2.24
CDCP1-202ENST00000425231 SSFA2P28290 1259 aa29.03■■■□□ 2.24
CDCP1-202ENST00000425231 LGR6Q9HBX8 967 aa29.03■■■□□ 2.24
CDCP1-202ENST00000425231 U2SURPO15042 1029 aaKnown RBP29.01■■■□□ 2.23
CDCP1-202ENST00000425231 GNPATO15228 680 aa29■■■□□ 2.23
CDCP1-202ENST00000425231 UTRNP46939 3433 aa28.99■■■□□ 2.23
CDCP1-202ENST00000425231 PPP2R1AP30153 589 aa28.99■■■□□ 2.23
CDCP1-202ENST00000425231 RNMTO43148 476 aaKnown RBP28.98■■■□□ 2.23
CDCP1-202ENST00000425231 KLHL34Q8N239 644 aa28.98■■■□□ 2.23
CDCP1-202ENST00000425231 SLC52A2Q9HAB3 445 aa28.98■■■□□ 2.23
CDCP1-202ENST00000425231 COL5A3P25940 1745 aaPredicted RBP28.97■■■□□ 2.23
CDCP1-202ENST00000425231 PTCD1O75127 700 aaKnown RBP28.97■■■□□ 2.23
CDCP1-202ENST00000425231 VIRMAQ69YN4 1812 aaKnown RBP28.97■■■□□ 2.23
CDCP1-202ENST00000425231 RC3H1Q5TC82 1133 aaKnown RBP28.96■■■□□ 2.23
CDCP1-202ENST00000425231 CFAP53Q96M91 514 aa28.96■■■□□ 2.23
CDCP1-202ENST00000425231 ADAMTS7Q9UKP4 1686 aa28.96■■■□□ 2.23
CDCP1-202ENST00000425231 MRC1P22897 1456 aa28.95■■■□□ 2.22
CDCP1-202ENST00000425231 CNTNAP4Q9C0A0 1308 aa28.94■■■□□ 2.22
CDCP1-202ENST00000425231 NLGN2Q8NFZ4 835 aa28.94■■■□□ 2.22
CDCP1-202ENST00000425231 YY1P25490 414 aa28.93■■■□□ 2.22
CDCP1-202ENST00000425231 RTCBQ9Y3I0 505 aaKnown RBP28.93■■■□□ 2.22
CDCP1-202ENST00000425231 MYH14Q7Z406 1995 aaKnown RBP28.92■■■□□ 2.22
CDCP1-202ENST00000425231 GOLGB1Q14789 3259 aaKnown RBP28.9■■■□□ 2.22
CDCP1-202ENST00000425231 RPS6KA4O75676 772 aa28.9■■■□□ 2.22
CDCP1-202ENST00000425231 TRAPPC3LQ5T215 181 aa28.9■■■□□ 2.22
CDCP1-202ENST00000425231 RSPH6AQ9H0K4 717 aa28.9■■■□□ 2.22
CDCP1-202ENST00000425231 CICQ96RK0 1608 aaPredicted RBP28.9■■■□□ 2.22
CDCP1-202ENST00000425231 GAS2L2Q8NHY3 880 aa28.89■■■□□ 2.22
CDCP1-202ENST00000425231 NUDCQ9Y266 331 aa28.89■■■□□ 2.22
CDCP1-202ENST00000425231 TJP1Q07157 1748 aa28.89■■■□□ 2.21
CDCP1-202ENST00000425231 SLC39A6Q13433 755 aa28.88■■■□□ 2.21
CDCP1-202ENST00000425231 ARHGEF1Q92888 912 aaKnown RBP28.88■■■□□ 2.21
CDCP1-202ENST00000425231 PHACTR3Q96KR7 559 aa28.88■■■□□ 2.21
CDCP1-202ENST00000425231 ADRA2BP18089 450 aa28.87■■■□□ 2.21
CDCP1-202ENST00000425231 PRKAR2BP31323 418 aa28.87■■■□□ 2.21
CDCP1-202ENST00000425231 GNAT3A8MTJ3 354 aa28.86■■■□□ 2.21
CDCP1-202ENST00000425231 CRKLP46109 303 aaKnown RBP28.86■■■□□ 2.21
CDCP1-202ENST00000425231 IL17REQ8NFR9 667 aa28.86■■■□□ 2.21
CDCP1-202ENST00000425231 CD2APQ9Y5K6 639 aa28.86■■■□□ 2.21
CDCP1-202ENST00000425231 GPR162Q16538 588 aa28.85■■■□□ 2.21
CDCP1-202ENST00000425231 KCPQ6ZWJ8 1503 aa28.84■■■□□ 2.21
CDCP1-202ENST00000425231 U2AF1L5P0DN76 240 aaPredicted RBP28.84■■■□□ 2.21
CDCP1-202ENST00000425231 U2AF1Q01081 240 aaKnown RBP eCLIP28.84■■■□□ 2.21
CDCP1-202ENST00000425231 DNAJC10Q8IXB1 793 aa28.83■■■□□ 2.21
CDCP1-202ENST00000425231 FCHSD2O94868 740 aa28.82■■■□□ 2.2
CDCP1-202ENST00000425231 INTS5Q6P9B9 1019 aaKnown RBP28.82■■■□□ 2.2
CDCP1-202ENST00000425231 RFC4P35249 363 aa28.81■■■□□ 2.2
CDCP1-202ENST00000425231 NLGN1Q8N2Q7 840 aa28.8■■■□□ 2.2
CDCP1-202ENST00000425231 C4AP0C0L4 1744 aa28.79■■■□□ 2.2
CDCP1-202ENST00000425231 MMP10P09238 476 aa28.79■■■□□ 2.2
CDCP1-202ENST00000425231 GYS1P13807 737 aa28.79■■■□□ 2.2
CDCP1-202ENST00000425231 CEMIPQ8WUJ3 1361 aa28.79■■■□□ 2.2
CDCP1-202ENST00000425231 UBR2Q8IWV8 1755 aa28.79■■■□□ 2.2
CDCP1-202ENST00000425231 CYP19A1P11511 503 aaPredicted RBP28.78■■■□□ 2.2
CDCP1-202ENST00000425231 TEFQ10587 303 aa28.78■■■□□ 2.2
CDCP1-202ENST00000425231 PELP1Q8IZL8 1130 aaKnown RBP28.78■■■□□ 2.2
CDCP1-202ENST00000425231 VSIG10Q8N0Z9 540 aa28.78■■■□□ 2.2
CDCP1-202ENST00000425231 CHD4Q14839 1912 aa28.78■■■□□ 2.2
CDCP1-202ENST00000425231 SIPA1L3O60292 1781 aaPredicted RBP28.78■■■□□ 2.2
CDCP1-202ENST00000425231 YBX3P16989 372 aaKnown RBP eCLIP28.77■■■□□ 2.21e-7■■■■□ 23.9
CDCP1-202ENST00000425231 CCDC87Q9NVE4 849 aa28.77■■■□□ 2.2
CDCP1-202ENST00000425231 ZNF790Q6PG37 636 aa28.75■■■□□ 2.19
CDCP1-202ENST00000425231 TTC5Q8N0Z6 440 aa28.74■■■□□ 2.19
CDCP1-202ENST00000425231 USP42Q9H9J4 1324 aaKnown RBP28.73■■■□□ 2.19
CDCP1-202ENST00000425231 SRP68Q9UHB9 627 aaKnown RBP28.73■■■□□ 2.19
CDCP1-202ENST00000425231 SOS1Q07889 1333 aaPredicted RBP28.72■■■□□ 2.19
CDCP1-202ENST00000425231 DDX10Q13206 875 aaKnown RBP28.72■■■□□ 2.19
CDCP1-202ENST00000425231 ZNF496Q96IT1 587 aaPredicted RBP28.72■■■□□ 2.19
CDCP1-202ENST00000425231 ZBTB1Q9Y2K1 713 aa28.7■■■□□ 2.19
CDCP1-202ENST00000425231 GRIN3BO60391 1043 aa28.69■■■□□ 2.18
CDCP1-202ENST00000425231 HEG1Q9ULI3 1381 aa28.69■■■□□ 2.18
CDCP1-202ENST00000425231 KIF13BQ9NQT8 1826 aa28.69■■■□□ 2.18
CDCP1-202ENST00000425231 FKBP8Q14318 412 aa28.69■■■□□ 2.18
CDCP1-202ENST00000425231 RALBP1Q15311 655 aa28.68■■■□□ 2.18
CDCP1-202ENST00000425231 MCM10Q7L590 875 aa28.68■■■□□ 2.18
CDCP1-202ENST00000425231 BTBD11A6QL63 1104 aa28.67■■■□□ 2.18
CDCP1-202ENST00000425231 KCNQ3O43525 872 aa28.67■■■□□ 2.18
CDCP1-202ENST00000425231 RTF1Q92541 710 aaKnown RBP28.67■■■□□ 2.18
CDCP1-202ENST00000425231 PARP3Q9Y6F1 533 aa28.67■■■□□ 2.18
CDCP1-202ENST00000425231 HTATSF1O43719 755 aaKnown RBP28.66■■■□□ 2.18
CDCP1-202ENST00000425231 STARD3NLO95772 234 aa28.66■■■□□ 2.18
CDCP1-202ENST00000425231 ZNF784Q8NCA9 323 aaPredicted RBP28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms